Hydro-Seq enables contamination-free high-throughput single-cell RNA-sequencing for circulating tumor cells
Cheng, Yu-Heng, Chen, Yu-Chih, Lin, Eric, Brien, Riley, Jung, Seungwon, Chen, Yu-Ting, Lee, Woncheol, Hao, Zhijian, Sahoo, Saswat, Min Kang, Hyun, Cong, Jason, Burness, Monika, Nagrath, Sunitha, S. Wicha, Max, Yoon, Euisik
Published in Nature communications (15.05.2019)
Published in Nature communications (15.05.2019)
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Case-only exome variation analysis of severe alcohol dependence using a multivariate hierarchical gene clustering approach
Gentry, Amanda Elswick, Alexander, Jeffry C, Ahangari, Mohammad, Peterson, Roseann E, Miles, Michael F, Bettinger, Jill C, Davies, Andrew G, Groteweil, Mike, Bacanu, Silviu A, Kendler, Kenneth S, Riley, Brien P, Webb, Bradley T
Published in PloS one (25.04.2023)
Published in PloS one (25.04.2023)
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Identifying potential risk genes and pathways for neuropsychiatric and substance use disorders using intermediate molecular mediator information
Gedik, Huseyin, Nguyen, Tan Hoang, Peterson, Roseann E, Chatzinakos, Christos, Vladimirov, Vladimir I, Riley, Brien P, Bacanu, Silviu-Alin
Published in Frontiers in genetics (21.06.2023)
Published in Frontiers in genetics (21.06.2023)
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Integrating mRNA and miRNA Weighted Gene Co-Expression Networks with eQTLs in the Nucleus Accumbens of Subjects with Alcohol Dependence
Mamdani, Mohammed, Williamson, Vernell, McMichael, Gowon O, Blevins, Tana, Aliev, Fazil, Adkins, Amy, Hack, Laura, Bigdeli, Tim, van der Vaart, Andrew D, Web, Bradley Todd, Bacanu, Silviu-Alin, Kalsi, Gursharan, Kendler, Kenneth S, Miles, Michael F, Dick, Danielle, Riley, Brien P, Dumur, Catherine, Vladimirov, Vladimir I
Published in PloS one (18.09.2015)
Published in PloS one (18.09.2015)
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Schizophrenia gene networks and pathways and their applications for novel candidate gene selection
Sun, Jingchun, Jia, Peilin, Fanous, Ayman H, van den Oord, Edwin, Chen, Xiangning, Riley, Brien P, Amdur, Richard L, Kendler, Kenneth S, Zhao, Zhongming
Published in PloS one (29.06.2010)
Published in PloS one (29.06.2010)
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Investigating the role of common and rare variants in multiplex multiple sclerosis families reveals an increased burden of common risk variation
Everest, Elif, Ahangari, Mohammad, Uygunoglu, Ugur, Tutuncu, Melih, Bulbul, Alper, Saip, Sabahattin, Duman, Taskin, Sezerman, Ugur, Reich, Daniel S., Riley, Brien P., Siva, Aksel, Tahir Turanli, Eda
Published in Scientific reports (10.10.2022)
Published in Scientific reports (10.10.2022)
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Genome-wide analysis of schizophrenia and multiple sclerosis identifies shared genomic loci with mixed direction of effects
Ahangari, Mohammad, Everest, Elif, Nguyen, Tan-Hoang, Verrelli, Brian C., Webb, Bradley T., Bacanu, Silviu-Alin, Tahir Turanli, Eda, Riley, Brien P.
Published in Brain, behavior, and immunity (01.08.2022)
Published in Brain, behavior, and immunity (01.08.2022)
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Relationship between polygenic risk scores and symptom dimensions of schizophrenia and schizotypy in multiplex families with schizophrenia
Ahangari, Mohammad, Bustamante, Daniel, Kirkpatrick, Robert, Nguyen, Tan-Hoang, Verrelli, Brian C., Fanous, Ayman, Kendler, Kenneth S., Webb, Bradley T., Bacanu, Silviu-Alin, Riley, Brien P.
Published in British journal of psychiatry (01.07.2023)
Published in British journal of psychiatry (01.07.2023)
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Single-cell RNA-sequencing of migratory breast cancer cells: discovering genes associated with cancer metastasis
Chen, Yu-Chih, Sahoo, Saswat, Brien, Riley, Jung, Seungwon, Humphries, Brock, Lee, Woncheol, Cheng, Yu-Heng, Zhang, Zhixiong, Luker, Kathryn E, Wicha, Max S, Luker, Gary D, Yoon, Euisik
Published in Analyst (London) (02.12.2019)
Published in Analyst (London) (02.12.2019)
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Leveraging genome-wide data to investigate differences between opioid use vs. opioid dependence in 41,176 individuals from the Psychiatric Genomics Consortium
Polimanti, Renato, Walters, Raymond K., Johnson, Emma C., McClintick, Jeanette N., Adkins, Amy E., Adkins, Daniel E., Bacanu, Silviu-Alin, Bierut, Laura J., Bigdeli, Tim B., Brown, Sandra, Bucholz, Kathleen K., Copeland, William E., Costello, E. Jane, Degenhardt, Louisa, Farrer, Lindsay A, Foroud, Tatiana M., Fox, Louis, Goate, Alison M., Grucza, Richard, Hack, Laura M., Hancock, Dana B., Hartz, Sarah M., Heath, Andrew C., Hewitt, John K., Hopfer, Christian J., Johnson, Eric O., Kendler, Kenneth S., Kranzler, Henry R., Krauter, Kenneth, Lai, Dongbing, Madden, Pamela A. F., Martin, Nicholas G., Maes, Hermine H., Nelson, Elliot C., Peterson, Roseann E., Porjesz, Bernice, Riley, Brien P., Saccone, Nancy, Stallings, Michael, Wall, Tamara L., Webb, Bradley T., Wetherill, Leah, Edenberg, Howard J., Agrawal, Arpana, Gelernter, Joel
Published in Molecular psychiatry (01.08.2020)
Published in Molecular psychiatry (01.08.2020)
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A simple yet accurate correction for winner's curse can predict signals discovered in much larger genome scans
Bigdeli, T Bernard, Lee, Donghyung, Webb, Bradley Todd, Riley, Brien P, Vladimirov, Vladimir I, Fanous, Ayman H, Kendler, Kenneth S, Bacanu, Silviu-Alin
Published in Bioinformatics (Oxford, England) (01.09.2016)
Published in Bioinformatics (Oxford, England) (01.09.2016)
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MicroRNA expression profiling in the prefrontal cortex of individuals affected with schizophrenia and bipolar disorders
Kim, Albert H, Reimers, Mark, Maher, Brion, Williamson, Vernell, McMichael, Omari, McClay, Joseph L, van den Oord, Edwin J.C.G, Riley, Brien P, Kendler, Kenneth S, Vladimirov, Vladimir I
Published in Schizophrenia research (01.12.2010)
Published in Schizophrenia research (01.12.2010)
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Large-scale integration of DNA methylation and gene expression array platforms identifies both cis and trans relationships
Lancaster, Eva E., Vladimirov, Vladimir I., Riley, Brien P., Landry, Joseph W., Roberson-Nay, Roxann, York, Timothy P.
Published in Epigenetics (02.12.2022)
Published in Epigenetics (02.12.2022)
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DIST: direct imputation of summary statistics for unmeasured SNPs
Lee, Donghyung, Bigdeli, T Bernard, Riley, Brien P, Fanous, Ayman H, Bacanu, Silviu-Alin
Published in Bioinformatics (15.11.2013)
Published in Bioinformatics (15.11.2013)
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mTADA is a framework for identifying risk genes from de novo mutations in multiple traits
Nguyen, Tan-Hoang, Dobbyn, Amanda, Brown, Ruth C., Riley, Brien P., Buxbaum, Joseph D., Pinto, Dalila, Purcell, Shaun M., Sullivan, Patrick F., He, Xin, Stahl, Eli A.
Published in Nature communications (10.06.2020)
Published in Nature communications (10.06.2020)
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The Genetic Architecture of Major Depressive Disorder in Han Chinese Women
Peterson, Roseann E, Cai, Na, Bigdeli, Tim B, Li, Yihan, Reimers, Mark, Nikulova, Anna, Webb, Bradley T, Bacanu, Silviu-Alin, Riley, Brien P, Flint, Jonathan, Kendler, Kenneth S
Published in JAMA psychiatry (Chicago, Ill.) (01.02.2017)
Published in JAMA psychiatry (Chicago, Ill.) (01.02.2017)
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Journal Article
TWAS pathway method greatly enhances the number of leads for uncovering the molecular underpinnings of psychiatric disorders
Chatzinakos, Chris, Georgiadis, Foivos, Lee, Donghyung, Cai, Na, Vladimirov, Vladimir I., Docherty, Anna, Webb, Bradley T., Riley, Brien P., Flint, Jonathan, Kendler, Kenneth S., Daskalakis, Nikolaos P., Bacanu, Silviu‐Alin
Published in American journal of medical genetics. Part B, Neuropsychiatric genetics (01.12.2020)
Published in American journal of medical genetics. Part B, Neuropsychiatric genetics (01.12.2020)
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