Age estimation in a long‐lived seabird (Ardenna tenuirostris) using DNA methylation‐based biomarkers
De Paoli‐Iseppi, Ricardo, Deagle, Bruce E., Polanowski, Andrea M., McMahon, Clive R., Dickinson, Joanne L., Hindell, Mark A., Jarman, Simon N.
Published in Molecular ecology resources (01.03.2019)
Published in Molecular ecology resources (01.03.2019)
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Multiomic analysis elucidates Complex I deficiency caused by a deep intronic variant in NDUFB10
Helman, Guy, Compton, Alison G., Hock, Daniella H., Walkiewicz, Marzena, Brett, Gemma R., Pais, Lynn, Tan, Tiong Y., De Paoli‐Iseppi, Ricardo, Clark, Michael B., Christodoulou, John, White, Susan M., Thorburn, David R., Stroud, David A., Stark, Zornitza, Simons, Cas
Published in Human mutation (01.01.2021)
Published in Human mutation (01.01.2021)
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Molecular biomarkers for chronological age in animal ecology
Jarman, Simon N, Polanowski, Andrea M, Faux, Cassandra E, Robbins, Jooke, De Paoli‐Iseppi, Ricardo, Bravington, Mark, Deagle, Bruce E
Published in Molecular ecology (01.10.2015)
Published in Molecular ecology (01.10.2015)
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Journal Article
UV-Associated Mutations Underlie the Etiology of MCV-Negative Merkel Cell Carcinomas
Wong, Stephen Q, Waldeck, Kelly, Vergara, Ismael A, Schröder, Jan, Madore, Jason, Wilmott, James S, Colebatch, Andrew J, De Paoli-Iseppi, Ricardo, Li, Jason, Lupat, Richard, Semple, Timothy, Arnau, Gisela Mir, Fellowes, Andrew, Leonard, J Helen, Hruby, George, Mann, Graham J, Thompson, John F, Cullinane, Carleen, Johnston, Meredith, Shackleton, Mark, Sandhu, Shahneen, Bowtell, David D L, Johnstone, Ricky W, Fox, Stephen B, McArthur, Grant A, Papenfuss, Anthony T, Scolyer, Richard A, Gill, Anthony J, Hicks, Rodney J, Tothill, Richard W
Published in Cancer research (Chicago, Ill.) (15.12.2015)
Published in Cancer research (Chicago, Ill.) (15.12.2015)
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Identification of cell barcodes from long-read single-cell RNA-seq with BLAZE
You, Yupei, Prawer, Yair D J, De Paoli-Iseppi, Ricardo, Hunt, Cameron P J, Parish, Clare L, Shim, Heejung, Clark, Michael B
Published in Genome Biology (06.04.2023)
Published in Genome Biology (06.04.2023)
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Journal Article
IsoVis - a webserver for visualization and annotation of alternative RNA isoforms
Wan, Ching Yin, Davis, Jack, Chauhan, Manveer, Gleeson, Josie, Prawer, Yair D J, De Paoli-Iseppi, Ricardo, Wells, Christine A, Choi, Jarny, Clark, Michael B
Published in Nucleic acids research (06.05.2024)
Published in Nucleic acids research (06.05.2024)
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Isoform Age - Splice Isoform Profiling Using Long-Read Technologies
De Paoli-Iseppi, Ricardo, Gleeson, Josie, Clark, Michael B.
Published in Frontiers in molecular biosciences (02.08.2021)
Published in Frontiers in molecular biosciences (02.08.2021)
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Discovery of NRG1-VII: the myeloid-derived class of NRG1
Berrocal-Rubio, Miguel A, Pawer, Yair David Joseph, Dinevska, Marija, De Paoli-Iseppi, Ricardo, Widodo, Samuel S, Gleeson, Josie, Rajab, Nadia, De Nardo, Will, Hallab, Jeannette, Li, Anran, Mantamadiotis, Theo, Clark, Michael B, Wells, Christine A
Published in BMC genomics (29.08.2024)
Published in BMC genomics (29.08.2024)
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Journal Article
Measuring Animal Age with DNA Methylation: From Humans to Wild Animals
De Paoli-Iseppi, Ricardo, Deagle, Bruce E, McMahon, Clive R, Hindell, Mark A, Dickinson, Joanne L, Jarman, Simon N
Published in Frontiers in genetics (17.08.2017)
Published in Frontiers in genetics (17.08.2017)
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Journal Article
Transcriptional and epi-transcriptional dynamics of SARS-CoV-2 during cellular infection
Chang, Jessie J.-Y., Rawlinson, Daniel, Pitt, Miranda E., Taiaroa, George, Gleeson, Josie, Zhou, Chenxi, Mordant, Francesca L., De Paoli-Iseppi, Ricardo, Caly, Leon, Purcell, Damian F.J., Stinear, Timothy P., Londrigan, Sarah L., Clark, Michael B., Williamson, Deborah A., Subbarao, Kanta, Coin, Lachlan J.M.
Published in Cell reports (Cambridge) (11.05.2021)
Published in Cell reports (Cambridge) (11.05.2021)
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Journal Article
Pervasive effects of RNA degradation on Nanopore direct RNA sequencing
Prawer, Yair D J, Gleeson, Josie, De Paoli-Iseppi, Ricardo, Clark, Michael B
Published in NAR genomics and bioinformatics (01.06.2023)
Published in NAR genomics and bioinformatics (01.06.2023)
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Journal Article
Long-Read RNA Sequencing Identifies Polyadenylation Elongation and Differential Transcript Usage of Host Transcripts During SARS-CoV-2 In Vitro Infection
Chang, Jessie J-Y, Gleeson, Josie, Rawlinson, Daniel, De Paoli-Iseppi, Ricardo, Zhou, Chenxi, Mordant, Francesca L, Londrigan, Sarah L, Clark, Michael B, Subbarao, Kanta, Stinear, Timothy P, Coin, Lachlan J M, Pitt, Miranda E
Published in Frontiers in immunology (06.04.2022)
Published in Frontiers in immunology (06.04.2022)
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Journal Article
DNA methylation levels in candidate genes associated with chronological age in mammals are not conserved in a long-lived seabird
De Paoli-Iseppi, Ricardo, Polanowski, Andrea M, McMahon, Clive, Deagle, Bruce E, Dickinson, Joanne L, Hindell, Mark A, Jarman, Simon N
Published in PloS one (07.12.2017)
Published in PloS one (07.12.2017)
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Journal Article
The long and the short of it: unlocking nanopore long-read RNA sequencing data with short-read differential expression analysis tools
Dong, Xueyi, Tian, Luyi, Gouil, Quentin, Kariyawasam, Hasaru, Su, Shian, De Paoli-Iseppi, Ricardo, Prawer, Yair David Joseph, Clark, Michael B, Breslin, Kelsey, Iminitoff, Megan, Blewitt, Marnie E, Law, Charity W, Ritchie, Matthew E
Published in NAR genomics and bioinformatics (01.06.2021)
Published in NAR genomics and bioinformatics (01.06.2021)
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Journal Article
Corrigendum: Isoform Age - Splice Isoform Profiling Using Long-Read Technologies
De Paoli-Iseppi, Ricardo, Gleeson, Josie, Clark, Michael B.
Published in Frontiers in molecular biosciences (27.09.2021)
Published in Frontiers in molecular biosciences (27.09.2021)
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Journal Article
Whole-genome landscapes of major melanoma subtypes
Hayward, Nicholas K., Wilmott, James S., Waddell, Nicola, Johansson, Peter A., Field, Matthew A., Nones, Katia, Patch, Ann-Marie, Kakavand, Hojabr, Alexandrov, Ludmil B., Burke, Hazel, Jakrot, Valerie, Kazakoff, Stephen, Holmes, Oliver, Leonard, Conrad, Sabarinathan, Radhakrishnan, Mularoni, Loris, Wood, Scott, Xu, Qinying, Waddell, Nick, Tembe, Varsha, Pupo, Gulietta M., De Paoli-Iseppi, Ricardo, Vilain, Ricardo E., Shang, Ping, Lau, Loretta M. S., Dagg, Rebecca A., Schramm, Sarah-Jane, Pritchard, Antonia, Dutton-Regester, Ken, Newell, Felicity, Fitzgerald, Anna, Shang, Catherine A., Grimmond, Sean M., Pickett, Hilda A., Yang, Jean Y., Stretch, Jonathan R., Behren, Andreas, Kefford, Richard F., Hersey, Peter, Long, Georgina V., Cebon, Jonathan, Shackleton, Mark, Spillane, Andrew J., Saw, Robyn P. M., López-Bigas, Núria, Pearson, John V., Thompson, John F., Scolyer, Richard A., Mann, Graham J.
Published in Nature (London) (11.05.2017)
Published in Nature (London) (11.05.2017)
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Journal Article
Combining BET and HDAC inhibitors synergistically induces apoptosis of melanoma and suppresses AKT and YAP signaling
Heinemann, Anja, Cullinane, Carleen, De Paoli-Iseppi, Ricardo, Wilmott, James S, Gunatilake, Dilini, Madore, Jason, Strbenac, Dario, Yang, Jean Y, Gowrishankar, Kavitha, Tiffen, Jessamy C, Prinjha, Rab K, Smithers, Nicholas, McArthur, Grant A, Hersey, Peter, Gallagher, Stuart J
Published in Oncotarget (28.08.2015)
Published in Oncotarget (28.08.2015)
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Journal Article
Multi-omic analysis elucidates Complex I deficiency caused by a deep intronic variant in NDUFB10
Helman, Guy, Compton, Alison G., Hock, Daniella H., Walkiewicz, Marzena, Brett, Gemma R., Pais, Lynn, Tan, Tiong Y., De Paoli-Iseppi, Ricardo, Clark, Michael B., Christodoulou, John, White, Susan M., Thorburn, David R., Stroud, David A., Stark, Zornitza, Simons, Cas
Published in Human mutation (11.11.2020)
Published in Human mutation (11.11.2020)
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