A conserved haplotype controls parallel adaptation in geographically distant salmonid populations
MILLER, MICHAEL R., BRUNELLI, JOSEPH P., WHEELER, PAUL A., LIU, SIXIN, REXROAD III, CAIRD E., PALTI, YNIV, DOE, CHRIS Q., THORGAARD, GARY H.
Published in Molecular ecology (01.01.2012)
Published in Molecular ecology (01.01.2012)
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Characterization of the rainbow trout transcriptome using Sanger and 454-pyrosequencing approaches
Salem, Mohamed, Rexroad, 3rd, Caird E, Wang, Jiannan, Thorgaard, Gary H, Yao, Jianbo
Published in BMC genomics (13.10.2010)
Published in BMC genomics (13.10.2010)
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Effect of starvation on global gene expression and proteolysis in rainbow trout (Oncorhynchus mykiss)
Salem, Mohamed, Silverstein, Jeff, Rexroad, 3rd, Caird E, Yao, Jianbo
Published in BMC genomics (19.09.2007)
Published in BMC genomics (19.09.2007)
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RNA-Seq identifies SNP markers for growth traits in rainbow trout
Salem, Mohamed, Vallejo, Roger L, Leeds, Timothy D, Palti, Yniv, Liu, Sixin, Sabbagh, Annas, Rexroad, 3rd, Caird E, Yao, Jianbo
Published in PloS one (04.05.2012)
Published in PloS one (04.05.2012)
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Detection and Validation of QTL Affecting Bacterial Cold Water Disease Resistance in Rainbow Trout Using Restriction-Site Associated DNA Sequencing
Palti, Yniv, Vallejo, Roger L, Gao, Guangtu, Liu, Sixin, Hernandez, Alvaro G, Rexroad, 3rd, Caird E, Wiens, Gregory D
Published in PloS one (16.09.2015)
Published in PloS one (16.09.2015)
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RNA-seq analysis of early hepatic response to handling and confinement stress in rainbow trout
Liu, Sixin, Gao, Guangtu, Palti, Yniv, Cleveland, Beth M, Weber, Gregory M, Rexroad, 3rd, Caird E
Published in PloS one (18.02.2014)
Published in PloS one (18.02.2014)
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Characterization of the rainbow trout egg microRNA transcriptome
Ma, Hao, Hostuttler, Mark, Wei, Hairong, Rexroad, 3rd, Caird E, Yao, Jianbo
Published in PloS one (25.06.2012)
Published in PloS one (25.06.2012)
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Transcriptome assembly, gene annotation and tissue gene expression atlas of the rainbow trout
Salem, Mohamed, Paneru, Bam, Al-Tobasei, Rafet, Abdouni, Fatima, Thorgaard, Gary H, Rexroad, Caird E, Yao, Jianbo
Published in PloS one (20.03.2015)
Published in PloS one (20.03.2015)
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Single nucleotide polymorphism discovery in rainbow trout by deep sequencing of a reduced representation library
Sánchez, Cecilia Castaño, Smith, Timothy P L, Wiedmann, Ralph T, Vallejo, Roger L, Salem, Mohamed, Yao, Jianbo, Rexroad, 3rd, Caird E
Published in BMC genomics (25.11.2009)
Published in BMC genomics (25.11.2009)
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resource of single-nucleotide polymorphisms for rainbow trout generated by restriction-site associated DNA sequencing of doubled haploids
Palti, Yniv, Gao, Guangtu, Miller, Michael R, Vallejo, Roger L, Wheeler, Paul A, Quillet, Edwige, Yao, Jianbo, Thorgaard, Gary H, Salem, Mohamed, Rexroad, Caird E., III
Published in Molecular ecology resources (01.05.2014)
Published in Molecular ecology resources (01.05.2014)
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Assessment of genetic correlation between bacterial cold water disease resistance and spleen index in a domesticated population of rainbow trout: identification of QTL on chromosome Omy19
Wiens, Gregory D, Vallejo, Roger L, Leeds, Timothy D, Palti, Yniv, Hadidi, Sima, Liu, Sixin, Evenhuis, Jason P, Welch, Timothy J, Rexroad, 3rd, Caird E
Published in PloS one (09.10.2013)
Published in PloS one (09.10.2013)
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A Vision for Development and Utilization of High-Throughput Phenotyping and Big Data Analytics in Livestock
Koltes, James E, Cole, John B, Clemmens, Roxanne, Dilger, Ryan N, Kramer, Luke M, Lunney, Joan K, McCue, Molly E, McKay, Stephanie D, Mateescu, Raluca G, Murdoch, Brenda M, Reuter, Ryan, Rexroad, Caird E, Rosa, Guilherme J M, Serão, Nick V L, White, Stephen N, Woodward-Greene, M Jennifer, Worku, Millie, Zhang, Hongwei, Reecy, James M
Published in Frontiers in genetics (17.12.2019)
Published in Frontiers in genetics (17.12.2019)
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A salmonid EST genomic study: genes, duplications, phylogeny and microarrays
Koop, Ben F, von Schalburg, Kristian R, Leong, Jong, Walker, Neil, Lieph, Ryan, Cooper, Glenn A, Robb, Adrienne, Beetz-Sargent, Marianne, Holt, Robert A, Moore, Richard, Brahmbhatt, Sonal, Rosner, Jamie, Rexroad, 3rd, Caird E, McGowan, Colin R, Davidson, William S
Published in BMC genomics (17.11.2008)
Published in BMC genomics (17.11.2008)
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A first generation integrated map of the rainbow trout genome
Palti, Yniv, Genet, Carine, Luo, Ming-Cheng, Charlet, Aurélie, Gao, Guangtu, Hu, Yuqin, Castaño-Sánchez, Cecilia, Tabet-Canale, Kamila, Krieg, Francine, Yao, Jianbo, Vallejo, Roger L, Rexroad, 3rd, Caird E
Published in BMC genomics (07.04.2011)
Published in BMC genomics (07.04.2011)
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Identification, characterization and genetic mapping of TLR7, TLR8a1 and TLR8a2 genes in rainbow trout (Oncorhynchus mykiss)
Palti, Yniv, Gahr, Scott A., Purcell, Maureen K., Hadidi, Sima, Rexroad, Caird E., Wiens, Gregory D.
Published in Developmental and comparative immunology (01.02.2010)
Published in Developmental and comparative immunology (01.02.2010)
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Transcriptome profiling in fast versus slow-growing rainbow trout across seasonal gradients
Danzmann, Roy G, Kocmarek, Andrea L, Norman, Joseph D, Rexroad, 3rd, Caird E, Palti, Yniv
Published in BMC genomics (15.01.2016)
Published in BMC genomics (15.01.2016)
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A New Single Nucleotide Polymorphism Database for North American Atlantic Salmon Generated Through Whole Genome Resequencing
Gao, Guangtu, Pietrak, Michael R, Burr, Gary S, Rexroad, 3rd, Caird E, Peterson, Brian C, Palti, Yniv
Published in Frontiers in genetics (21.02.2020)
Published in Frontiers in genetics (21.02.2020)
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The generation of the first chromosome-level de novo genome assembly and the development and validation of a 50K SNP array for the St. John River aquaculture strain of North American Atlantic salmon
Gao, Guangtu, Waldbieser, Geoffrey C, Youngblood, Ramey C, Zhao, Dongyan, Pietrak, Michael R, Allen, Melissa S, Stannard, Jason A, Buchanan, John T, Long, Roseanna L, Milligan, Melissa, Burr, Gary, Mejía-Guerra, Katherine, Sheehan, Moira J, Scheffler, Brian E, Rexroad, Caird E, Peterson, Brian C, Palti, Yniv
Published in G3 : genes - genomes - genetics (01.09.2023)
Published in G3 : genes - genomes - genetics (01.09.2023)
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