Sequential intrahost evolution and onward transmission of SARS-CoV-2 variants
Gonzalez-Reiche, Ana S, Alshammary, Hala, Schaefer, Sarah, Patel, Gopi, Polanco, Jose, Carreño, Juan Manuel, Amoako, Angela A, Rooker, Aria, Cognigni, Christian, Floda, Daniel, van de Guchte, Adriana, Khalil, Zain, Farrugia, Keith, Assad, Nima, Zhang, Jian, Alburquerque, Bremy, Sominsky, Levy A, Gleason, Charles, Srivastava, Komal, Sebra, Robert, Ramirez, Juan David, Banu, Radhika, Shrestha, Paras, Krammer, Florian, Paniz-Mondolfi, Alberto, Sordillo, Emilia Mia, Simon, Viviana, van Bakel, Harm
Published in Nature communications (03.06.2023)
Published in Nature communications (03.06.2023)
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Introductions and early spread of SARS-CoV-2 in the New York City area
Gonzalez-Reiche, Ana S, Hernandez, Matthew M, Sullivan, Mitchell J, Ciferri, Brianne, Alshammary, Hala, Obla, Ajay, Fabre, Shelcie, Kleiner, Giulio, Polanco, Jose, Khan, Zenab, Alburquerque, Bremy, van de Guchte, Adriana, Dutta, Jayeeta, Francoeur, Nancy, Melo, Betsaida Salom, Oussenko, Irina, Deikus, Gintaras, Soto, Juan, Sridhar, Shwetha Hara, Wang, Ying-Chih, Twyman, Kathryn, Kasarskis, Andrew, Altman, Deena R, Smith, Melissa, Sebra, Robert, Aberg, Judith, Krammer, Florian, García-Sastre, Adolfo, Luksza, Marta, Patel, Gopi, Paniz-Mondolfi, Alberto, Gitman, Melissa, Sordillo, Emilia Mia, Simon, Viviana, van Bakel, Harm
Published in Science (17.07.2020)
Published in Science (17.07.2020)
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Evaluation and validation of an RT‐PCR assay for specific detection of monkeypox virus (MPXV)
Paniz‐Mondolfi, Alberto, Guerra, Susana, Muñoz, Marina, Luna, Nicolas, Hernandez, Matthew M., Patino, Luz H., Reidy, Jason, Banu, Radhika, Shrestha, Paras, Liggayu, Bernadette, Umeaku, Audrey, Chen, Feng, Cao, Liyong, Patel, Armi, Hanna, Ayman, Li, Sunny, Look, Andy, Pagani, Nina, Albrecht, Randy, Pearl, Rebecca, Garcia‐Sastre, Adolfo, Bogunovic, Dusan, Palacios, Gustavo, Bonnier, Lucia, Cera, Freddy, Lopez, Heidi, Calderon, Yvette, Eiting, Erick, Mullen, Karr, Shin, Sangyoon Jason, Lugo, Luz Amarilis, Urbina, Antonio E., Starks, Carlotta, Koo, Tonny, Uychiat, Patricia, Look, Avery, Bakel, Harm, Gonzalez‐Reiche, Ana, Betancourt, Adolfo Firpo, Reich, David, Cordon‐Cardo, Carlos, Simon, Viviana, Sordillo, Emilia M., Ramírez, Juan David
Published in Journal of medical virology (01.01.2023)
Published in Journal of medical virology (01.01.2023)
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Highly Pathogenic Avian Influenza A(H5N1) Virus Outbreak in New England Seals, United States
Puryear, Wendy, Sawatzki, Kaitlin, Hill, Nichola, Foss, Alexa, Stone, Jonathon J, Doughty, Lynda, Walk, Dominique, Gilbert, Katie, Murray, Maureen, Cox, Elena, Patel, Priya, Mertz, Zak, Ellis, Stephanie, Taylor, Jennifer, Fauquier, Deborah, Smith, Ainsley, DiGiovanni, Jr, Robert A, van de Guchte, Adriana, Gonzalez-Reiche, Ana Silvia, Khalil, Zain, van Bakel, Harm, Torchetti, Mia K, Lantz, Kristina, Lenoch, Julianna B, Runstadler, Jonathan
Published in Emerging infectious diseases (01.04.2023)
Published in Emerging infectious diseases (01.04.2023)
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The arrival and spread of SARS‐CoV‐2 in Colombia
Ramírez, Juan David, Florez, Carolina, Muñoz, Marina, Hernández, Carolina, Castillo, Adriana, Gomez, Sergio, Rico, Angelica, Pardo, Lisseth, Barros, Esther C., Castañeda, Sergio, Ballesteros, Nathalia, Martínez, David, Vega, Laura, Jaimes, Jesús E., Cruz‐Saavedra, Lissa, Herrera, Giovanny, Patiño, Luz H., Teherán, Aníbal A., Gonzalez‐Reiche, Ana S., Hernandez, Matthew M., Sordillo, Emilia Mia, Simon, Viviana, Bakel, Harm, Paniz‐Mondolfi, Alberto
Published in Journal of medical virology (01.02.2021)
Published in Journal of medical virology (01.02.2021)
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Journal Article
Robust clinical detection of SARS‐CoV‐2 variants by RT‐PCR/MALDI‐TOF multitarget approach
Hernandez, Matthew M., Banu, Radhika, Gonzalez‐Reiche, Ana S., Guchte, Adriana, Khan, Zenab, Shrestha, Paras, Cao, Liyong, Chen, Feng, Shi, Huanzhi, Hanna, Ayman, Alshammary, Hala, Fabre, Shelcie, Amoako, Angela, Obla, Ajay, Alburquerque, Bremy, Patiño, Luz Helena, Ramírez, Juan David, Sebra, Robert, Gitman, Melissa R., Nowak, Michael D., Cordon‐Cardo, Carlos, Schutzbank, Ted E., Simon, Viviana, Bakel, Harm, Sordillo, Emilia Mia, Paniz‐Mondolfi, Alberto E.
Published in Journal of medical virology (01.04.2022)
Published in Journal of medical virology (01.04.2022)
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Influenza A virus circulation in backyard animals in the Pacific coast of Guatemala, 2013–2014
Müller‐Theissen, Maria L., Azziz‐Baumgartner, Eduardo, Ortiz, Lucia, Szablewski, Christine M., Alvarez, Danilo, Gonzalez‐Reiche, Ana S., Jara, Jorge, Davis, C. Todd, Cordon‐Rosales, Celia
Published in Zoonoses and public health (01.11.2022)
Published in Zoonoses and public health (01.11.2022)
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Integrated Transcriptome and Network Analysis Reveals Spatiotemporal Dynamics of Calvarial Suturogenesis
Holmes, Greg, Gonzalez-Reiche, Ana S., Lu, Na, Zhou, Xianxiao, Rivera, Joshua, Kriti, Divya, Sebra, Robert, Williams, Anthony A., Donovan, Michael J., Potter, S. Steven, Pinto, Dalila, Zhang, Bin, van Bakel, Harm, Jabs, Ethylin Wang
Published in Cell reports (Cambridge) (07.07.2020)
Published in Cell reports (Cambridge) (07.07.2020)
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Flexibility In Vitro of Amino Acid 226 in the Receptor-Binding Site of an H9 Subtype Influenza A Virus and Its Effect In Vivo on Virus Replication, Tropism, and Transmission
Obadan, Adebimpe O, Santos, Jefferson, Ferreri, Lucas, Thompson, Andrew J, Carnaccini, Silvia, Geiger, Ginger, Gonzalez Reiche, Ana S, Rajão, Daniela S, Paulson, James C, Perez, Daniel R
Published in Journal of virology (15.03.2019)
Published in Journal of virology (15.03.2019)
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Limited intestinal inflammation despite diarrhea, fecal viral RNA and SARS-CoV-2-specific IgA in patients with acute COVID-19
Britton, Graham J, Chen-Liaw, Alice, Cossarini, Francesca, Livanos, Alexandra E, Spindler, Matthew P, Plitt, Tamar, Eggers, Joseph, Mogno, Ilaria, Gonzalez-Reiche, Ana S, Siu, Sophia, Tankelevich, Michael, Grinspan, Lauren Tal, Dixon, Rebekah E, Jha, Divya, van de Guchte, Adriana, Khan, Zenab, Martinez-Delgado, Gustavo, Amanat, Fatima, Hoagland, Daisy A, tenOever, Benjamin R, Dubinsky, Marla C, Merad, Miriam, van Bakel, Harm, Krammer, Florian, Bongers, Gerold, Mehandru, Saurabh, Faith, Jeremiah J
Published in Scientific reports (25.06.2021)
Published in Scientific reports (25.06.2021)
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Single-cell analysis identifies a key role for Hhip in murine coronal suture development
Holmes, Greg, Gonzalez-Reiche, Ana S, Saturne, Madrikha, Motch Perrine, Susan M, Zhou, Xianxiao, Borges, Ana C, Shewale, Bhavana, Richtsmeier, Joan T, Zhang, Bin, van Bakel, Harm, Jabs, Ethylin Wang
Published in Nature communications (08.12.2021)
Published in Nature communications (08.12.2021)
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A household case evidences shorter shedding of SARS-CoV-2 in naturally infected cats compared to their human owners
Neira, Víctor, Brito, Bárbara, Agüero, Belén, Berrios, Felipe, Valdés, Valentina, Gutierrez, Alberto, Ariyama, Naomi, Espinoza, Patricio, Retamal, Patricio, Holmes, Edward C., Gonzalez-Reiche, Ana S., Khan, Zenab, van de Guchte, Adriana, Dutta, Jayeeta, Miorin, Lisa, Kehrer, Thomas, Galarce, Nicolás, Almonacid, Leonardo I., Levican, Jorge, van Bakel, Harm, García-Sastre, Adolfo, Medina, Rafael A.
Published in Emerging microbes & infections (01.01.2021)
Published in Emerging microbes & infections (01.01.2021)
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SARS-CoV-2 serosurvey across multiple waves of the COVID-19 pandemic in New York City between 2020-2023
Carreño, Juan Manuel, Wagner, Abram L, Monahan, Brian, Singh, Gagandeep, Floda, Daniel, Gonzalez-Reiche, Ana S, Tcheou, Johnstone, Raskin, Ariel, Bielak, Dominika, Morris, Sara, Fried, Miriam, Yellin, Temima, Sullivan, Leeba, Sordillo, Emilia Mia, Gordon, Aubree, van Bakel, Harm, Simon, Viviana, Krammer, Florian
Published in Nature communications (11.07.2024)
Published in Nature communications (11.07.2024)
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Genomic and ultrastructural analysis of monkeypox virus in skin lesions and in human/animal infected cells reveals further morphofunctional insights into viral pathogenicity
Paniz‐Mondolfi, Alberto, Reidy, Jason, Pagani, Nina, Lednicky, John A., McGrail, Joseph Patrick, Kasminskaya, Yana, Patino, Luz H., Garcia‐Sastre, Adolfo, Palacios, Gustavo, Gonzalez‐Reiche, Ana Silvia, Bakel, Harm, Firpo Betancourt, Adolfo, Hernandez, Matthew M., Cordon‐Cardo, Carlos, Simon, Viviana, Sordillo, Emilia M., Ramírez, Juan David, Guerra, Susana
Published in Journal of medical virology (01.06.2023)
Published in Journal of medical virology (01.06.2023)
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Journal Article
Viable virus shedding during SARS-CoV-2 reinfection
Letizia, Andrew G, Smith, Darci R, Ge, Yongchao, Ramos, Irene, Sealfon, Rachel S G, Goforth, Carl, Gonzalez-Reiche, Ana S, Vangeti, Sindhu, Weir, Dawn L, Alshammary, Hala, Chen, Hua Wei, George, Mary-Catherine, Soares-Schanoski, Alessandra, Lizewski, Rhonda A, Lizewski, Stephen E, Marayag, Jan, Miller, Clare M, Nunez, Edgar, Porter, Chad K, Ana, Ernesto Santa, Schilling, Megan, Sugiharto, Victor A, Sun, Peifang, Termini, Michael, van de Guchte, Adriana, Troyanskaya, Olga G, van Bakel, Harm, Sealfon, Stuart C
Published in The lancet respiratory medicine (01.07.2021)
Published in The lancet respiratory medicine (01.07.2021)
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The impact of S2 mutations on Omicron SARS-CoV-2 cell surface expression and fusogenicity
Escalera, Alba, Laporte, Manon, Turner, Sam, Karakus, Umut, Gonzalez-Reiche, Ana S, van de Guchte, Adriana, Farrugia, Keith, Khalil, Zain, van Bakel, Harm, Smith, Derek, García-Sastre, Adolfo, Aydillo, Teresa
Published in Emerging microbes & infections (01.12.2024)
Published in Emerging microbes & infections (01.12.2024)
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Journal Article
FaceBase 3: analytical tools and FAIR resources for craniofacial and dental research
Samuels, Bridget D, Aho, Robert, Brinkley, James F, Bugacov, Alejandro, Feingold, Eleanor, Fisher, Shannon, Gonzalez-Reiche, Ana S, Hacia, Joseph G, Hallgrimsson, Benedikt, Hansen, Karissa, Harris, Matthew P, Ho, Thach-Vu, Holmes, Greg, Hooper, Joan E, Jabs, Ethylin Wang, Jones, Kenneth L, Kesselman, Carl, Klein, Ophir D, Leslie, Elizabeth J, Li, Hong, Liao, Eric C, Long, Hannah, Lu, Na, Maas, Richard L, Marazita, Mary L, Mohammed, Jaaved, Prescott, Sara, Schuler, Robert, Selleri, Licia, Spritz, Richard A, Swigut, Tomek, van Bakel, Harm, Visel, Axel, Welsh, Ian, Williams, Cristina, Williams, Trevor J, Wysocka, Joanna, Yuan, Yuan, Chai, Yang
Published in Development (Cambridge) (21.09.2020)
Published in Development (Cambridge) (21.09.2020)
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Origin, distribution, and potential risk factors associated with influenza A virus in swine in two production systems in Guatemala
Gonzalez‐Reiche, Ana S., Ramírez, Ana L., Müller, María L., Orellana, David, Sosa, Silvia M., Ola, Pablo, Paniagua, Jorge, Ortíz, Lucía, Hernandez, Jorge, Cordón‐Rosales, Celia, Perez, Daniel R.
Published in Influenza and other respiratory viruses (01.03.2017)
Published in Influenza and other respiratory viruses (01.03.2017)
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Molecular evidence of SARS-CoV-2 in New York before the first pandemic wave
Hernandez, Matthew M., Gonzalez-Reiche, Ana S., Alshammary, Hala, Fabre, Shelcie, Khan, Zenab, van De Guchte, Adriana, Obla, Ajay, Ellis, Ethan, Sullivan, Mitchell J., Tan, Jessica, Alburquerque, Bremy, Soto, Juan, Wang, Ching-Yi, Sridhar, Shwetha Hara, Wang, Ying-Chih, Smith, Melissa, Sebra, Robert, Paniz-Mondolfi, Alberto E., Gitman, Melissa R., Nowak, Michael D., Cordon-Cardo, Carlos, Luksza, Marta, Krammer, Florian, van Bakel, Harm, Simon, Viviana, Sordillo, Emilia Mia
Published in Nature communications (08.06.2021)
Published in Nature communications (08.06.2021)
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Plasticity of Amino Acid Residue 145 Near the Receptor Binding Site of H3 Swine Influenza A Viruses and Its Impact on Receptor Binding and Antibody Recognition
Santos, Jefferson J S, Abente, Eugenio J, Obadan, Adebimpe O, Thompson, Andrew J, Ferreri, Lucas, Geiger, Ginger, Gonzalez-Reiche, Ana S, Lewis, Nicola S, Burke, David F, Rajão, Daniela S, Paulson, James C, Vincent, Amy L, Perez, Daniel R
Published in Journal of virology (15.01.2019)
Published in Journal of virology (15.01.2019)
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