The cis-regulatory dynamics of embryonic development at single-cell resolution
Cusanovich, Darren A., Reddington, James P., Garfield, David A., Daza, Riza M., Aghamirzaie, Delasa, Marco-Ferreres, Raquel, Pliner, Hannah A., Christiansen, Lena, Qiu, Xiaojie, Steemers, Frank J., Trapnell, Cole, Shendure, Jay, Furlong, Eileen E. M.
Published in Nature (London) (22.03.2018)
Published in Nature (London) (22.03.2018)
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Non-canonical functions of the DNA methylome in gene regulation
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Redistribution of H3K27me3 upon DNA hypomethylation results in de-repression of Polycomb target genes
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The multifunctional poly(A)-binding protein (PABP) 1 is subject to extensive dynamic post-translational modification, which molecular modelling suggests plays an important role in co-ordinating its activities
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The non-methylated DNA-binding function of Kaiso is not required in early Xenopus laevis development
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Published in Development (Cambridge) (01.03.2009)
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Lineage-Resolved Enhancer and Promoter Usage during a Time Course of Embryogenesis
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The hourglass model of evolutionary conservation during embryogenesis extends to developmental enhancers with signatures of positive selection
Liu, Jialin, Viales, Rebecca R, Khoueiry, Pierre, Reddington, James P, Girardot, Charles, Furlong, Eileen E M, Robinson-Rechavi, Marc
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Promoter DNA methylation couples genome-defence mechanisms to epigenetic reprogramming in the mouse germline
Hackett, Jamie A, Reddington, James P, Nestor, Colm E, Dunican, Donncha S, Branco, Miguel R, Reichmann, Judith, Reik, Wolf, Surani, M Azim, Adams, Ian R, Meehan, Richard R
Published in Development (Cambridge) (01.10.2012)
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Apoptosis and DNA methylation
Meng, Huan X, Hackett, James A, Nestor, Colm, Dunican, Donncha S, Madej, Monika, Reddington, James P, Pennings, Sari, Harrison, David J, Meehan, Richard R
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The Role of Chromatin Accessibility in cis-Regulatory Evolution
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Investigating 5-hydroxymethylcytosine (5hmC): the state of the art
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Published in Methods in molecular biology (Clifton, N.J.) (01.01.2014)
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Published in Cancer research communications (01.09.2024)
Published in Cancer research communications (01.09.2024)
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The hourglass model of evolutionary conservation during embryogenesis extends to developmental enhancers with signatures of positive selection
Liu, Jialin, Viales, Rebecca R, Khoueiry, Pierre, Reddington, James P, Girardot, Charles, Furlong, Eileen E M, Robinson-Rechavi, Marc
Published in bioRxiv (15.12.2020)
Published in bioRxiv (15.12.2020)
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Paper
The cis-regulatory dynamics of embryonic development at single cell resolution
Cusanovich, Darren A, Reddington, James P, Garfield, David A, Daza, Riza, Marco-Ferreres, Raquel, Christiansen, Lena, Qiu, Xiaojie, Steemers, Frank, Cole Trapnell, Shendure, Jay, Furlong, Eileen Em
Published in bioRxiv (20.07.2017)
Published in bioRxiv (20.07.2017)
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