Mechanism of Bacterial Transcription Initiation: RNA Polymerase - Promoter Binding, Isomerization to Initiation-Competent Open Complexes, and Initiation of RNA Synthesis
Saecker, Ruth M., Record, M. Thomas, deHaseth, Pieter L.
Published in Journal of molecular biology (07.10.2011)
Published in Journal of molecular biology (07.10.2011)
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Journal Article
Separation of preferential interaction and excluded volume effects on DNA duplex and hairpin stability
Knowles, D.B, LaCroix, Andrew S, Deines, Nickolas F, Shkel, Irina, Record, M. Thomas Jr
Published in Proceedings of the National Academy of Sciences - PNAS (02.08.2011)
Published in Proceedings of the National Academy of Sciences - PNAS (02.08.2011)
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Journal Article
Step-by-Step Regulation of Productive and Abortive Transcription Initiation by Pyrophosphorolysis
Plaskon, Dylan, Evensen, Claire, Henderson, Kate, Palatnik, Benjamin, Ishikuri, Takahiro, Wang, Hao-Che, Doughty, Sarah, Thomas Record Jr, M.
Published in Journal of molecular biology (15.07.2022)
Published in Journal of molecular biology (15.07.2022)
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Journal Article
Experimentally determined strengths of favorable and unfavorable interactions of amide atoms involved in protein self-assembly in water
Cheng, Xian, Shkel, Irina A., O’Connor, Kevin, Record, M. Thomas
Published in Proceedings of the National Academy of Sciences - PNAS (03.11.2020)
Published in Proceedings of the National Academy of Sciences - PNAS (03.11.2020)
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Journal Article
Why Hofmeister effects of many salts favor protein folding but not DNA helix formation
Pegram, Laurel M, Wendorff, Timothy, Erdmann, Robert, Shkel, Irina, Bellissimo, Dana, Felitsky, Daniel J, Record, M. Thomas Jr
Published in Proceedings of the National Academy of Sciences - PNAS (27.04.2010)
Published in Proceedings of the National Academy of Sciences - PNAS (27.04.2010)
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Journal Article
Temperature effects on RNA polymerase initiation kinetics reveal which open complex initiates and that bubble collapse is stepwise
Plaskon, Dylan M, Henderson, Kate L, Felth, Lindsey C, Molzahn, Cristen M, Evensen, Claire, Dyke, Sarah, Shkel, Irina A, Record, Jr, M Thomas
Published in Proceedings of the National Academy of Sciences - PNAS (27.07.2021)
Published in Proceedings of the National Academy of Sciences - PNAS (27.07.2021)
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Journal Article
High-throughput, fluorescent-aptamer-based measurements of steady-state transcription rates for the Mycobacterium tuberculosis RNA polymerase
Jensen, Drake, Ruiz Manzano, Ana, Rector, Maxwell, Tomko, Eric J, Record, M Thomas, Galburt, Eric A
Published in Nucleic acids research (27.10.2023)
Published in Nucleic acids research (27.10.2023)
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Journal Article
How Glutamate Promotes Liquid-liquid Phase Separation and DNA Binding Cooperativity of E. coli SSB Protein
Kozlov, Alexander G., Cheng, Xian, Zhang, Hongshan, Shinn, Min Kyung, Weiland, Elizabeth, Nguyen, Binh, Shkel, Irina A., Zytkiewicz, Emily, Finkelstein, Ilya J., Record, M. Thomas, Lohman, Timothy M.
Published in Journal of molecular biology (15.05.2022)
Published in Journal of molecular biology (15.05.2022)
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Quantifying Amide–Aromatic Interactions at Molecular and Atomic Levels: Experimentally Determined Enthalpic and Entropic Contributions to Interactions of Amide sp2O, N, C and sp3C Unified Atoms with Naphthalene sp2C Atoms in Water
Zytkiewicz, Emily, Shkel, Irina A., Cheng, Xian, Rupanya, Anuchit, McClure, Kate, Karim, Rezwana, Yang, Sumin, Yang, Felix, Record, M. Thomas
Published in Biochemistry (Easton) (03.10.2023)
Published in Biochemistry (Easton) (03.10.2023)
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Fluorescence-Detected Conformational Changes in Duplex DNA in Open Complex Formation by Escherichia coli RNA Polymerase: Upstream Wrapping and Downstream Bending Precede Clamp Opening and Insertion of the Downstream Duplex
Sreenivasan, Raashi, Shkel, Irina A, Chhabra, Munish, Drennan, Amanda, Heitkamp, Sara, Wang, Hao-Che, Sridevi, Malavika A, Plaskon, Dylan, McNerney, Christina, Callies, Katelyn, Cimperman, Clare K, Record, M. Thomas
Published in Biochemistry (Easton) (28.04.2020)
Published in Biochemistry (Easton) (28.04.2020)
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