Whole-genome and targeted sequencing of drug-resistant Mycobacterium tuberculosis on the iSeq100 and MiSeq: A performance, ease-of-use, and cost evaluation
Colman, Rebecca E, Mace, Aurélien, Seifert, Marva, Hetzel, Jonathan, Mshaiel, Haifa, Suresh, Anita, Lemmer, Darrin, Engelthaler, David M, Catanzaro, Donald G, Young, Amanda G, Denkinger, Claudia M, Rodwell, Timothy C
Published in PLoS medicine (30.04.2019)
Published in PLoS medicine (30.04.2019)
Get full text
Journal Article
Application of Targeted Next-Generation Sequencing Assay on a Portable Sequencing Platform for Culture-Free Detection of Drug-Resistant Tuberculosis from Clinical Samples
Cabibbe, Andrea M, Spitaleri, Andrea, Battaglia, Simone, Colman, Rebecca E, Suresh, Anita, Uplekar, Swapna, Rodwell, Timothy C, Cirillo, Daniela M
Published in Journal of clinical microbiology (22.09.2020)
Published in Journal of clinical microbiology (22.09.2020)
Get full text
Journal Article
Detection of Low-Level Mixed-Population Drug Resistance in Mycobacterium tuberculosis Using High Fidelity Amplicon Sequencing
Colman, Rebecca E, Schupp, James M, Hicks, Nathan D, Smith, David E, Buchhagen, Jordan L, Valafar, Faramarz, Crudu, Valeriu, Romancenco, Elena, Noroc, Ecaterina, Jackson, Lynn, Catanzaro, Donald G, Rodwell, Timothy C, Catanzaro, Antonino, Keim, Paul, Engelthaler, David M
Published in PloS one (13.05.2015)
Published in PloS one (13.05.2015)
Get full text
Journal Article
Mixed Mycobacterium tuberculosis-Strain Infections Are Associated With Poor Treatment Outcomes Among Patients With Newly Diagnosed Tuberculosis, Independent of Pretreatment Heteroresistance
Shin, Sanghyuk S, Modongo, Chawangwa, Baik, Yeonsoo, Allender, Christopher, Lemmer, Darrin, Colman, Rebecca E, Engelthaler, David M, Warren, Robin M, Zetola, Nicola M
Published in The Journal of infectious diseases (05.11.2018)
Published in The Journal of infectious diseases (05.11.2018)
Get full text
Journal Article
Prospective exploratory evaluation of Cepheid Xpert Mycobacterium tuberculosis host response cartridge: a focus on adolescents and young adults
Seifert, Marva, Catanzaro, Donald G, Gracia, Michael, Hillery, Naomi, Tahseen, Sabira, Masood, Faisal, Hussain, Alamdar, Majeed, Uzma, Coleman, Rebecca E, Syed, Rehan R, Catanzaro, Antonino, Rodwell, Timothy
Published in Clinical infectious diseases (05.09.2024)
Published in Clinical infectious diseases (05.09.2024)
Get more information
Journal Article
Cryptic Microheteroresistance Explains Mycobacterium tuberculosis Phenotypic Resistance
Metcalfe, John Z, Streicher, Elizabeth, Theron, Grant, Colman, Rebecca E, Allender, Christopher, Lemmer, Darrin, Warren, Rob, Engelthaler, David M
Published in American journal of respiratory and critical care medicine (01.11.2017)
Published in American journal of respiratory and critical care medicine (01.11.2017)
Get full text
Journal Article
Clinical Evaluation of the XDR-LFC Assay for the Molecular Detection of Isoniazid, Rifampin, Fluoroquinolone, Kanamycin, Capreomycin, and Amikacin Drug Resistance in a Prospective Cohort
Syed, Rehan R, Catanzaro, Donald G, Colman, Rebecca E, Cooney, Christopher G, Linger, Yvonne, Kukhtin, Alexander V, Holmberg, Rebecca C, Norville, Ryan, Crudu, Valeriu, Ciobanu, Nelly, Codreanu, Alexandru, Seifert, Marva, Hillery, Naomi, Chiles, Peter, Catanzaro, Antonino, Rodwell, Timothy C
Published in Journal of clinical microbiology (23.03.2023)
Published in Journal of clinical microbiology (23.03.2023)
Get full text
Journal Article
Phylogenetic and genomic diversity in isolates from the globally distributed Acinetobacter baumannii ST25 lineage
Sahl, Jason W., Del Franco, Mariateresa, Pournaras, Spyros, Colman, Rebecca E., Karah, Nabil, Dijkshoorn, Lenie, Zarrilli, Raffaele
Published in Scientific reports (14.10.2015)
Published in Scientific reports (14.10.2015)
Get full text
Journal Article
Mycobacterium tuberculosis Subculture Results in Loss of Potentially Clinically Relevant Heteroresistance
Metcalfe, John Z, Streicher, Elizabeth, Theron, Grant, Colman, Rebecca E, Penaloza, Renee, Allender, Christopher, Lemmer, Darrin, Warren, Robin M, Engelthaler, David M
Published in Antimicrobial agents and chemotherapy (01.11.2017)
Published in Antimicrobial agents and chemotherapy (01.11.2017)
Get full text
Journal Article
Rapid Drug Susceptibility Testing of Drug-Resistant Mycobacterium tuberculosis Isolates Directly from Clinical Samples by Use of Amplicon Sequencing: a Proof-of-Concept Study
Colman, Rebecca E, Anderson, Julia, Lemmer, Darrin, Lehmkuhl, Erik, Georghiou, Sophia B, Heaton, Hannah, Wiggins, Kristin, Gillece, John D, Schupp, James M, Catanzaro, Donald G, Crudu, Valeriu, Cohen, Ted, Rodwell, Timothy C, Engelthaler, David M
Published in Journal of clinical microbiology (01.08.2016)
Published in Journal of clinical microbiology (01.08.2016)
Get full text
Journal Article
Best practices for evaluating single nucleotide variant calling methods for microbial genomics
Olson, Nathan D, Lund, Steven P, Colman, Rebecca E, Foster, Jeffrey T, Sahl, Jason W, Schupp, James M, Keim, Paul, Morrow, Jayne B, Salit, Marc L, Zook, Justin M
Published in Frontiers in genetics (07.07.2015)
Published in Frontiers in genetics (07.07.2015)
Get full text
Journal Article
Utility of the physical examination in detecting pulmonary hypertension. A mixed methods study
Colman, Rebecca, Whittingham, Heather, Tomlinson, George, Granton, John
Published in PloS one (24.10.2014)
Published in PloS one (24.10.2014)
Get full text
Journal Article
Age and sex distribution of Mycobacterium tuberculosis infection and rifampicin resistance in Myanmar as detected by Xpert MTB/RIF
Seifert, Marva, Aung, Hlaing Thazin, Besler, Nicole, Harris, Victoria, Mar, Tin Tin, Colman, Rebecca E, Rodwell, Timothy C, Aung, Si Thu
Published in BMC infectious diseases (09.08.2021)
Published in BMC infectious diseases (09.08.2021)
Get full text
Journal Article
Barriers to optimal palliative care of lung transplant candidates
Colman, Rebecca E, Curtis, J Randall, Nelson, Judith E, Efferen, Linda, Hadjiliadis, Denis, Levine, Deborah J, Meyer, Keith C, Padilla, Maria, Strek, Mary, Varkey, Basil, Singer, Lianne G
Published in Chest (01.03.2013)
Published in Chest (01.03.2013)
Get more information
Journal Article
Diverse Burkholderia Species Isolated from Soils in the Southern United States with No Evidence of B. pseudomallei
Hall, Carina M, Busch, Joseph D, Shippy, Kenzie, Allender, Christopher J, Kaestli, Mirjam, Mayo, Mark, Sahl, Jason W, Schupp, James M, Colman, Rebecca E, Keim, Paul, Currie, Bart J, Wagner, David M
Published in PloS one (23.11.2015)
Published in PloS one (23.11.2015)
Get full text
Journal Article
Guidance for Studies Evaluating the Accuracy of Rapid Tuberculosis Drug-Susceptibility Tests
Georghiou, Sophia B, Schumacher, Samuel G, Rodwell, Timothy C, Colman, Rebecca E, Miotto, Paolo, Gilpin, Christopher, Ismail, Nazir, Rodrigues, Camilla, Warren, Rob, Weyer, Karin, Zignol, Matteo, Arafah, Sonia, Cirillo, Daniela Maria, Denkinger, Claudia M
Published in The Journal of infectious diseases (08.10.2019)
Published in The Journal of infectious diseases (08.10.2019)
Get full text
Journal Article
Genomic characterization of Burkholderia pseudomallei isolates selected for medical countermeasures testing: comparative genomics associated with differential virulence
Sahl, Jason W, Allender, Christopher J, Colman, Rebecca E, Califf, Katy J, Schupp, James M, Currie, Bart J, Van Zandt, Kristopher E, Gelhaus, H Carl, Keim, Paul, Tuanyok, Apichai
Published in PloS one (24.03.2015)
Published in PloS one (24.03.2015)
Get full text
Journal Article