Catchment-scale biogeography of riverine bacterioplankton
Read, Daniel S, Gweon, Hyun S, Bowes, Michael J, Newbold, Lindsay K, Field, Dawn, Bailey, Mark J, Griffiths, Robert I
Published in The ISME Journal (01.02.2015)
Published in The ISME Journal (01.02.2015)
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Journal Article
Prospects and challenges of environmental DNA (eDNA) monitoring in freshwater ponds
Harper, Lynsey R., Buxton, Andrew S., Rees, Helen C., Bruce, Kat, Brys, Rein, Halfmaerten, David, Read, Daniel S., Watson, Hayley V., Sayer, Carl D., Jones, Eleanor P., Priestley, Victoria, Mächler, Elvira, Múrria, Cesc, Garcés-Pastor, Sandra, Medupin, Cecilia, Burgess, Katherine, Benson, Gillian, Boonham, Neil, Griffiths, Richard A., Lawson Handley, Lori, Hänfling, Bernd
Published in Hydrobiologia (01.01.2019)
Published in Hydrobiologia (01.01.2019)
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Journal Article
A longitudinal study reveals persistence of antimicrobial resistance on livestock farms is not due to antimicrobial usage alone
Smith, Richard P, May, Hannah E, AbuOun, Manal, Stubberfield, Emma, Gilson, Daniel, Chau, Kevin K, Crook, Derrick W, Shaw, Liam P, Read, Daniel S, Stoesser, Nicole, Vilar, Maria Jose, Anjum, Muna F
Published in Frontiers in microbiology (14.03.2023)
Published in Frontiers in microbiology (14.03.2023)
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Journal Article
Development and application of environmental DNA surveillance for the threatened crucian carp (Carassius carassius)
Harper, Lynsey R., Griffiths, Nathan P., Lawson Handley, Lori, Sayer, Carl D., Read, Daniel S., Harper, Kirsten J., Blackman, Rosetta C., Li, Jianlong, Hänfling, Bernd
Published in Freshwater biology (01.01.2019)
Published in Freshwater biology (01.01.2019)
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Journal Article
Temporal and spatial variation in distribution of fish environmental DNA in England’s largest lake
Lawson Handley, Lori, Read, Daniel S., Winfield, Ian J., Kimbell, Helen, Johnson, Harriet, Li, Jianlong, Hahn, Christoph, Blackman, Rosetta, Wilcox, Rose, Donnelly, Rob, Szitenberg, Amir, Hänfling, Bernd
Published in Environmental DNA (Hoboken, N.J.) (01.05.2019)
Published in Environmental DNA (Hoboken, N.J.) (01.05.2019)
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Journal Article
Comparison of long-read sequencing technologies in the hybrid assembly of complex bacterial genomes
De Maio, Nicola, Shaw, Liam P, Hubbard, Alasdair, George, Sophie, Sanderson, Nicholas D, Swann, Jeremy, Wick, Ryan, AbuOun, Manal, Stubberfield, Emma, Hoosdally, Sarah J, Crook, Derrick W, Peto, Timothy E A, Sheppard, Anna E, Bailey, Mark J, Read, Daniel S, Anjum, Muna F, Walker, A Sarah, Stoesser, Nicole, On Behalf Of The Rehab Consortium
Published in Microbial genomics (01.09.2019)
Published in Microbial genomics (01.09.2019)
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Journal Article
Citizen science monitoring reveals links between honeybee health, pesticide exposure and seasonal availability of floral resources
Woodcock, Ben A., Oliver, Anna E., Newbold, Lindsay K., Soon Gweon, H., Read, Daniel S., Sayed, Ujala, Savage, Joanna, Bacon, Jim, Upcott, Emily, Howell, Katherine, Turvey, Katharine, Roy, David B., Gloria Pereira, M., Sleep, Darren, Greenop, Arran, Pywell, Richard F.
Published in Scientific reports (22.08.2022)
Published in Scientific reports (22.08.2022)
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Journal Article
Enterobacterales plasmid sharing amongst human bloodstream infections, livestock, wastewater, and waterway niches in Oxfordshire, UK
Matlock, William, Lipworth, Samuel, Chau, Kevin K, AbuOun, Manal, Barker, Leanne, Kavanagh, James, Andersson, Monique, Oakley, Sarah, Morgan, Marcus, Crook, Derrick W, Read, Daniel S, Anjum, Muna, Shaw, Liam P, Stoesser, Nicole
Published in eLife (24.03.2023)
Published in eLife (24.03.2023)
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Journal Article
The impact of sequencing depth on the inferred taxonomic composition and AMR gene content of metagenomic samples
Gweon, H Soon, Shaw, Liam P, Swann, Jeremy, De Maio, Nicola, AbuOun, Manal, Niehus, Rene, Hubbard, Alasdair T M, Bowes, Mike J, Bailey, Mark J, Peto, Tim E A, Hoosdally, Sarah J, Walker, A Sarah, Sebra, Robert P, Crook, Derrick W, Anjum, Muna F, Read, Daniel S, Stoesser, Nicole
Published in Environmental microbiome (24.10.2019)
Published in Environmental microbiome (24.10.2019)
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Journal Article
Influence of storage time on the stability of diatom assemblages using DNA from riverine biofilm samples
Warren, Jonathan, Butler, Sean, Evens, Nick, Hunt, Laura, Kelly, Martyn, Newbold, Lindsay, Read, Daniel S, Taylor, Joe D, Walsh, Kerry
Published in Metabarcoding and Metagenomics (22.08.2024)
Published in Metabarcoding and Metagenomics (22.08.2024)
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Journal Article
Metalloproteins and phytochelatin synthase may confer protection against zinc oxide nanoparticle induced toxicity in Caenorhabditis elegans
Polak, Natasa, Read, Daniel S., Jurkschat, Kerstin, Matzke, Marianne, Kelly, Frank J., Spurgeon, David J., Stürzenbaum, Stephen R.
Published in Comparative biochemistry and physiology. Toxicology & pharmacology (01.03.2014)
Published in Comparative biochemistry and physiology. Toxicology & pharmacology (01.03.2014)
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Journal Article
Using boreholes as windows into groundwater ecosystems
Sorensen, James P R, Maurice, Louise, Edwards, François K, Lapworth, Daniel J, Read, Daniel S, Allen, Debbie, Butcher, Andrew S, Newbold, Lindsay K, Townsend, Barry R, Williams, Peter J
Published in PloS one (31.07.2013)
Published in PloS one (31.07.2013)
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Journal Article
Sedimentary DNA records long‐term changes in a lake bacterial community in response to varying nutrient availability
Thorpe, Amy C., Anderson, Amy, Goodall, Tim, Thackeray, Stephen J., Maberly, Stephen C., Bendle, James A., Gweon, Hyun S., Read, Daniel S.
Published in Environmental DNA (Hoboken, N.J.) (01.11.2022)
Published in Environmental DNA (Hoboken, N.J.) (01.11.2022)
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Journal Article
Application of eDNA metabarcoding in a fragmented lowland river: Spatial and methodological comparison of fish species composition
Antognazza, Caterina M., Britton, Robert J., Read, Daniel S., Goodall, Tim, Mantzouratou, Anna, De Santis, Vanessa, Davies, Peter, Aprahamian, Miran, Franklin, Elizabeth, Hardouin, Emilie A., Andreou, Demetra
Published in Environmental DNA (Hoboken, N.J.) (01.03.2021)
Published in Environmental DNA (Hoboken, N.J.) (01.03.2021)
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Journal Article
Optimising species detection probability and sampling effort in lake fish eDNA surveys
Sellers, Graham S., Jerde, Christopher L., Harper, Lynsey R., Benucci, Marco, Di Muri, Cristina, Li, Jianlong, Peirson, Graeme, Walsh, Kerry, Hatton-Ellis, Tristan, Duncan, Willie, Duguid, Alistair, Ottewell, Dave, Willby, Nigel, Law, Alan, Bean, Colin W., Winfield, Ian J., Read, Daniel S., Handley, Lori Lawson, Hänfling, Bernd
Published in Metabarcoding and Metagenomics (24.07.2024)
Published in Metabarcoding and Metagenomics (24.07.2024)
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Journal Article
Integration of DNA extraction, metabarcoding and an informatics pipeline to underpin a national citizen science honey monitoring scheme
Oliver, Anna E., Newbold, Lindsay K., Gweon, Hyun S., Read, Daniel S., Woodcock, Ben A., Pywell, Richard F.
Published in MethodsX (01.01.2021)
Published in MethodsX (01.01.2021)
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Journal Article
Environmental DNA metabarcoding of lake fish communities reflects long-term data from established survey methods
Hänfling, Bernd, Lawson Handley, Lori, Read, Daniel S., Hahn, Christoph, Li, Jianlong, Nichols, Paul, Blackman, Rosetta C., Oliver, Anna, Winfield, Ian J.
Published in Molecular ecology (01.07.2016)
Published in Molecular ecology (01.07.2016)
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