Comprehensive identification of RNA-protein interactions in any organism using orthogonal organic phase separation (OOPS)
Queiroz, Rayner M L, Smith, Tom, Villanueva, Eneko, Marti-Solano, Maria, Monti, Mie, Pizzinga, Mariavittoria, Mirea, Dan-Mircea, Ramakrishna, Manasa, Harvey, Robert F, Dezi, Veronica, Thomas, Gavin H, Willis, Anne E, Lilley, Kathryn S
Published in Nature biotechnology (01.02.2019)
Published in Nature biotechnology (01.02.2019)
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Journal Article
Efficient recovery of the RNA-bound proteome and protein-bound transcriptome using phase separation (OOPS)
Villanueva, Eneko, Smith, Tom, Queiroz, Rayner M L, Monti, Mie, Pizzinga, Mariavittoria, Elzek, Mohamed, Dezi, Veronica, Harvey, Robert F, Ramakrishna, Manasa, Willis, Anne E, Lilley, Kathryn S
Published in Nature protocols (01.08.2020)
Published in Nature protocols (01.08.2020)
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Journal Article
System-wide analysis of RNA and protein subcellular localization dynamics
Villanueva, Eneko, Smith, Tom, Pizzinga, Mariavittoria, Elzek, Mohamed, Queiroz, Rayner M L, Harvey, Robert F, Breckels, Lisa M, Crook, Oliver M, Monti, Mie, Dezi, Veronica, Willis, Anne E, Lilley, Kathryn S
Published in Nature methods (01.01.2024)
Published in Nature methods (01.01.2024)
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Journal Article
Analysis of Phaseolus vulgaris response to its association with Trichoderma harzianum (ALL-42) in the presence or absence of the phytopathogenic fungi Rhizoctonia solani and Fusarium solani
Pereira, Jackeline L, Queiroz, Rayner M L, Charneau, Sébastien O, Felix, Carlos R, Ricart, Carlos A O, da Silva, Francilene Lopes, Steindorff, Andrei Stecca, Ulhoa, Cirano J, Noronha, Eliane F
Published in PloS one (30.05.2014)
Published in PloS one (30.05.2014)
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Journal Article
Changes in the Oligodendrocyte Progenitor Cell Proteome with Ageing
de la Fuente, Alerie G., Queiroz, Rayner M.L., Ghosh, Tanay, McMurran, Christopher E., Cubillos, Juan F., Bergles, Dwight E., Fitzgerald, Denise C., Jones, Clare A., Lilley, Kathryn S., Glover, Colin P., Franklin, Robin J.M.
Published in Molecular & cellular proteomics (01.08.2020)
Published in Molecular & cellular proteomics (01.08.2020)
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Journal Article
Exoproteome profiling of Trypanosoma cruzi during amastigogenesis early stages
Mandacaru, Samuel C, Queiroz, Rayner M L, Alborghetti, Marcos R, de Oliveira, Lucas S, de Lima, Consuelo M R, Bastos, Izabela M D, Santana, Jaime M, Roepstorff, Peter, Ricart, Carlos André O, Charneau, Sébastien
Published in PloS one (22.11.2019)
Published in PloS one (22.11.2019)
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Journal Article
Trans‐acting translational regulatory RNA binding proteins
Harvey, Robert F., Smith, Tom S., Mulroney, Thomas, Queiroz, Rayner M. L., Pizzinga, Mariavittoria, Dezi, Veronica, Villenueva, Eneko, Ramakrishna, Manasa, Lilley, Kathryn S., Willis, Anne E.
Published in Wiley interdisciplinary reviews. RNA (01.05.2018)
Published in Wiley interdisciplinary reviews. RNA (01.05.2018)
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Journal Article
Organic phase separation opens up new opportunities to interrogate the RNA-binding proteome
Smith, Tom, Villanueva, Eneko, Queiroz, Rayner M.L., Dawson, Charlotte S., Elzek, Mohamed, Urdaneta, Erika C., Willis, Anne E., Beckmann, Benedikt M., Krijgsveld, Jeroen, Lilley, Kathryn S.
Published in Current opinion in chemical biology (01.02.2020)
Published in Current opinion in chemical biology (01.02.2020)
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Journal Article
Deconjugated Bile Salts Produced by Extracellular Bile-Salt Hydrolase-Like Activities from the Probiotic Lactobacillus johnsonii La1 Inhibit Giardia duodenalis In vitro Growth
Travers, Marie-Agnès, Sow, Cissé, Zirah, Séverine, Deregnaucourt, Christiane, Chaouch, Soraya, Queiroz, Rayner M L, Charneau, Sébastien, Allain, Thibault, Florent, Isabelle, Grellier, Philippe
Published in Frontiers in microbiology (27.09.2016)
Published in Frontiers in microbiology (27.09.2016)
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Journal Article
Quantitative Proteomic and Phosphoproteomic Analysis of Trypanosoma cruzi Amastigogenesis
Queiroz, Rayner M.L., Charneau, Sébastien, Mandacaru, Samuel C., Schwämmle, Veit, Lima, Beatriz D., Roepstorff, Peter, Ricart, Carlos A.O.
Published in Molecular & cellular proteomics (01.12.2014)
Published in Molecular & cellular proteomics (01.12.2014)
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Journal Article
Proteomic analysis in primary T cells reveals IL-7 alters T cell receptor thresholding via CYTIP/cytohesin/LFA-1 localisation and activation
Queiroz, Rayner M L, Piper, Siân C, Rees, Johanna S, Strickson, Sam, Briend, Emmanuel, Low, Choon Pei, Ferguson, G John, Lilley, Kathryn S, Jackson, Antony P, Finch, Donna K
Published in Biochemical journal (11.02.2022)
Published in Biochemical journal (11.02.2022)
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Journal Article
Author Correction: Comprehensive identification of RNA-protein interactions in any organism using orthogonal organic phase separation (OOPS)
Queiroz, Rayner M L, Smith, Tom, Villanueva, Eneko, Marti-Solano, Maria, Monti, Mie, Pizzinga, Mariavittoria, Mirea, Dan-Mircea, Ramakrishna, Manasa, Harvey, Robert F, Dezi, Veronica, Thomas, Gavin H, Willis, Anne E, Lilley, Kathryn S
Published in Nature biotechnology (01.06.2019)
Published in Nature biotechnology (01.06.2019)
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Journal Article
A Deep Insight into the Sialome of Rhodnius neglectus, a Vector of Chagas Disease
Santiago, Paula Beatriz, Assumpção, Teresa C F, de Araújo, Carla Nunes, Bastos, Izabela Marques Dourado, Neves, David, da Silva, Ionizete Garcia, Charneau, Sébastien, Queiroz, Rayner Myr L, Raiol, Tainá, Oliveira, João Victor de Araújo, de Sousa, Marcelo Valle, Calvo, Eric, Ribeiro, José M C, Santana, Jaime M
Published in PLoS neglected tropical diseases (29.04.2016)
Published in PLoS neglected tropical diseases (29.04.2016)
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Journal Article
Cell Surface Proteome Analysis of Human-Hosted Trypanosoma cruzi Life Stages
Queiroz, Rayner M. L, Charneau, Sébastien, Bastos, Izabela M. D, Santana, Jaime M, Sousa, Marcelo V, Roepstorff, Peter, Ricart, Carlos A. O
Published in Journal of proteome research (01.08.2014)
Published in Journal of proteome research (01.08.2014)
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Journal Article
Comprehensive Proteomic Analysis of Trypanosoma cruzi Epimastigote Cell Surface Proteins by Two Complementary Methods
Queiroz, Rayner M. L, Charneau, Sébastien, Motta, Flávia N, Santana, Jaime M, Roepstorff, Peter, Ricart, Carlos A. O
Published in Journal of proteome research (05.07.2013)
Published in Journal of proteome research (05.07.2013)
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Journal Article
CFTR Rescue by Lumacaftor (VX-809) Induces an Extensive Reorganization of Mitochondria in the Cystic Fibrosis Bronchial Epithelium
Braccia, Clarissa, Christopher, Josie A, Crook, Oliver M, Breckels, Lisa M, Queiroz, Rayner M L, Liessi, Nara, Tomati, Valeria, Capurro, Valeria, Bandiera, Tiziano, Baldassari, Simona, Pedemonte, Nicoletta, Lilley, Kathryn S, Armirotti, Andrea
Published in Cells (Basel, Switzerland) (16.06.2022)
Published in Cells (Basel, Switzerland) (16.06.2022)
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Journal Article
Dynamic molecular events associated to Plasmodium berghei gametogenesis through proteomic approach
Garcia, Carlos H.S., Depoix, Delphine, Queiroz, Rayner M.L., Souza, Jaques M.F., Fontes, Wagner, de Sousa, Marcelo V., Santos, Marlon D.M., Carvalho, Paulo C., Grellier, Philippe, Charneau, Sébastien
Published in Journal of proteomics (30.05.2018)
Published in Journal of proteomics (30.05.2018)
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Journal Article
Insight into the Salivary Transcriptome and Proteome of Dipetalogaster maxima
Assumpção, Teresa C. F, Charneau, Sébastien, Santiago, Paula B. M, Francischetti, Ivo M. B, Meng, Zhaojing, Araújo, Carla N, Pham, Van M, Queiroz, Rayner M. L, Nery de Castro, Cleudson, André Ricart, Carlos, Santana, Jaime M, Ribeiro, José M. C
Published in Journal of proteome research (04.02.2011)
Published in Journal of proteome research (04.02.2011)
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Journal Article
Characterization of Clostridium thermocellum Isolates Grown on Cellulose and Sugarcane Bagasse
Blume, Liana R., Noronha, Eliane F., Leite, Jackeline, Queiroz, Rayner M. L., Ricart, Carlos A. Ornelas, de Sousa, Marcelo Valle, Felix, Carlos R.
Published in Bioenergy research (01.06.2013)
Published in Bioenergy research (01.06.2013)
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Journal Article
Exploring the molecular complexity of Triatoma dimidiata sialome
Santiago, Paula Beatriz, de Araújo, Carla Nunes, Charneau, Sébastien, Bastos, Izabela Marques Dourado, Assumpção, Teresa Cristina F., Queiroz, Rayner Myr Lauterjung, Praça, Yanna Reis, Cordeiro, Thuany de Moura, Garcia, Carlos Henrique Saraiva, da Silva, Ionizete Garcia, Raiol, Tainá, Motta, Flávia Nader, de Araújo Oliveira, João Victor, de Sousa, Marcelo Valle, Ribeiro, José Marcos C., de Santana, Jaime Martins
Published in Journal of proteomics (01.03.2018)
Published in Journal of proteomics (01.03.2018)
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Journal Article