Structural basis of mitochondrial receptor binding and constriction by DRP1
Kalia, Raghav, Wang, Ray Yu-Ruei, Yusuf, Ali, Thomas, Paul V., Agard, David A., Shaw, Janet M., Frost, Adam
Published in Nature (London) (01.06.2018)
Published in Nature (London) (01.06.2018)
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Journal Article
Automated structure refinement of macromolecular assemblies from cryo-EM maps using Rosetta
Wang, Ray Yu-Ruei, Song, Yifan, Barad, Benjamin A, Cheng, Yifan, Fraser, James S, DiMaio, Frank
Published in eLife (26.09.2016)
Published in eLife (26.09.2016)
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Journal Article
Structure of the Type VI Secretion System Contractile Sheath
Kudryashev, Mikhail, Wang, Ray Yu-Ruei, Brackmann, Maximilian, Scherer, Sebastian, Maier, Timm, Baker, David, DiMaio, Frank, Stahlberg, Henning, Egelman, Edward H., Basler, Marek
Published in Cell (26.02.2015)
Published in Cell (26.02.2015)
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Journal Article
Atomic structure of Hsp90-Cdc37-Cdk4 reveals that Hsp90 traps and stabilizes an unfolded kinase
Verba, Kliment A., Wang, Ray Yu-Ruei, Arakawa, Akihiko, Liu, Yanxin, Shirouzu, Mikako, Yokoyama, Shigeyuki, Agard, David A.
Published in Science (American Association for the Advancement of Science) (24.06.2016)
Published in Science (American Association for the Advancement of Science) (24.06.2016)
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Journal Article
High-Resolution Comparative Modeling with RosettaCM
Song, Yifan, DiMaio, Frank, Wang, Ray Yu-Ruei, Kim, David, Miles, Chris, Brunette, TJ, Thompson, James, Baker, David
Published in Structure (London) (08.10.2013)
Published in Structure (London) (08.10.2013)
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Journal Article
EMRinger: side chain–directed model and map validation for 3D cryo-electron microscopy
Barad, Benjamin A, Echols, Nathaniel, Wang, Ray Yu-Ruei, Cheng, Yifan, DiMaio, Frank, Adams, Paul D, Fraser, James S
Published in Nature methods (01.10.2015)
Published in Nature methods (01.10.2015)
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Journal Article
Structure of Hsp90–Hsp70–Hop–GR reveals the Hsp90 client-loading mechanism
Wang, Ray Yu-Ruei, Noddings, Chari M., Kirschke, Elaine, Myasnikov, Alexander G., Johnson, Jill L., Agard, David A.
Published in Nature (London) (20.01.2022)
Published in Nature (London) (20.01.2022)
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Journal Article
Improved de novo structure prediction in CASP11 by incorporating coevolution information into Rosetta
Ovchinnikov, Sergey, Kim, David E., Wang, Ray Yu-Ruei, Liu, Yuan, DiMaio, Frank, Baker, David
Published in Proteins, structure, function, and bioinformatics (01.09.2016)
Published in Proteins, structure, function, and bioinformatics (01.09.2016)
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Journal Article
Unique double-ring structure of the peroxisomal Pex1/Pex6 ATPase complex revealed by cryo-electron microscopy
Blok, Neil B, Dongyan Tan, Ray Yu-Ruei Wang, Pawel A. Penczek, David Baker, Frank DiMaio, Tom A. Rapoport, Thomas Walz
Published in Proceedings of the National Academy of Sciences - PNAS (28.07.2015)
Published in Proceedings of the National Academy of Sciences - PNAS (28.07.2015)
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Journal Article
Modeling disordered regions in proteins using Rosetta
Wang, Ray Yu-Ruei, Han, Yan, Krassovsky, Kristina, Sheffler, William, Tyka, Michael, Baker, David
Published in PloS one (29.07.2011)
Published in PloS one (29.07.2011)
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Journal Article
Structure of Hsp90–p23–GR reveals the Hsp90 client-remodelling mechanism
Noddings, Chari M., Wang, Ray Yu-Ruei, Johnson, Jill L., Agard, David A.
Published in Nature (London) (20.01.2022)
Published in Nature (London) (20.01.2022)
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Journal Article
De novo protein structure determination from near-atomic-resolution cryo-EM maps
Wang, Ray Yu-Ruei, Kudryashev, Mikhail, Li, Xueming, Egelman, Edward H, Basler, Marek, Cheng, Yifan, Baker, David, DiMaio, Frank
Published in Nature methods (01.04.2015)
Published in Nature methods (01.04.2015)
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Journal Article
Structure of Hsp90-p23-GR reveals the Hsp90 client-maturation mechanism
Noddings, Chari M., Wang, Ray Yu-Ruei, Johnson, Jill L., Agard, David A.
Published in Nature (London) (22.12.2021)
Published in Nature (London) (22.12.2021)
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Journal Article
Advances in GPCR Modeling Evaluated by the GPCR Dock 2013 Assessment: Meeting New Challenges
Kufareva, Irina, Katritch, Vsevolod, Stevens, Raymond C., Abagyan, Ruben
Published in Structure (London) (05.08.2014)
Published in Structure (London) (05.08.2014)
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Journal Article
Improved de novo structure prediction in CASP 11 by incorporating coevolution information into Rosetta
Ovchinnikov, Sergey, Kim, David E., Wang, Ray Yu‐Ruei, Liu, Yuan, DiMaio, Frank, Baker, David
Published in Proteins, structure, function, and bioinformatics (01.09.2016)
Published in Proteins, structure, function, and bioinformatics (01.09.2016)
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Journal Article
Atomic structure of Hsp90:Cdc37:Cdk4 reveals Hsp90 regulates kinase via dramatic unfolding
Verba, Kliment A., Wang, Ray Yu-Ruei, Arakawa, Akihiko, Liu, Yanxin, Shirouzu, Mikako, Yokoyama, Shigeyuki, Agard, David A.
Published in Science (American Association for the Advancement of Science) (24.06.2016)
Published in Science (American Association for the Advancement of Science) (24.06.2016)
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Journal Article
EMRinger: Side-chain-directed model and map validation for 3D Electron Cryomicroscopy
Barad, Benjamin A, Echols, Nathaniel, Wang, Ray Yu-Ruei, Cheng, Yifan, DiMaio, Frank, Adams, Paul D, Fraser, James S
Published in Nature methods (17.08.2015)
Published in Nature methods (17.08.2015)
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Journal Article