Genome-wide analysis of allele-specific expression of genes in the model diatom Phaeodactylum tricornutum
Hoguin, Antoine, Rastogi, Achal, Bowler, Chris, Tirichine, Leila
Published in Scientific reports (03.02.2021)
Published in Scientific reports (03.02.2021)
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Journal Article
Recent progress in diatom genomics and epigenomics
Tirichine, Leila, Rastogi, Achal, Bowler, Chris
Published in Current opinion in plant biology (01.04.2017)
Published in Current opinion in plant biology (01.04.2017)
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Journal Article
Integrative analysis of large scale transcriptome data draws a comprehensive landscape of Phaeodactylum tricornutum genome and evolutionary origin of diatoms
Rastogi, Achal, Maheswari, Uma, Dorrell, Richard G, Vieira, Fabio Rocha Jimenez, Maumus, Florian, Kustka, Adam, McCarthy, James, Allen, Andy E, Kersey, Paul, Bowler, Chris, Tirichine, Leila
Published in Scientific reports (19.03.2018)
Published in Scientific reports (19.03.2018)
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Journal Article
A genomics approach reveals the global genetic polymorphism, structure, and functional diversity of ten accessions of the marine model diatom Phaeodactylum tricornutum
Rastogi, Achal, Vieira, Fabio Rocha Jimenez, Deton-Cabanillas, Anne-Flore, Veluchamy, Alaguraj, Cantrel, Catherine, Wang, Gaohong, Vanormelingen, Pieter, Bowler, Chris, Piganeau, Gwenael, Hu, Hanhua, Tirichine, Leila
Published in The ISME Journal (01.02.2020)
Published in The ISME Journal (01.02.2020)
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Journal Article
An integrative analysis of post-translational histone modifications in the marine diatom Phaeodactylum tricornutum
Veluchamy, Alaguraj, Rastogi, Achal, Lin, Xin, Lombard, Bérangère, Murik, Omer, Thomas, Yann, Dingli, Florent, Rivarola, Maximo, Ott, Sandra, Liu, Xinyue, Sun, Yezhou, Rabinowicz, Pablo D, McCarthy, James, Allen, Andrew E, Loew, Damarys, Bowler, Chris, Tirichine, Leïla
Published in Genome Biology (20.05.2015)
Published in Genome Biology (20.05.2015)
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Journal Article
PhytoCRISP-Ex: a web-based and stand-alone application to find specific target sequences for CRISPR/CAS editing
Rastogi, Achal, Murik, Omer, Bowler, Chris, Tirichine, Leila
Published in BMC bioinformatics (01.07.2016)
Published in BMC bioinformatics (01.07.2016)
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Journal Article
Probing the evolutionary history of epigenetic mechanisms: what can we learn from marine diatoms
Rastogi, Achal, Lin, Xin, Lombard, Bérangère, Loew, Damarys, Tirichine, Leïla
Published in AIMS genetics (01.10.2015)
Published in AIMS genetics (01.10.2015)
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Journal Article
Genome wide natural variation of H3K27me3 selectively marks genes predicted to be important for cell differentiation in Phaeodactylum tricornutum
Zhao, Xue, Rastogi, Achal, Deton Cabanillas, Anne Flore, Ait Mohamed, Ouardia, Cantrel, Catherine, Lombard, Berangère, Murik, Omer, Genovesio, Auguste, Bowler, Chris, Bouyer, Daniel, Loew, Damarys, Lin, Xin, Veluchamy, Alaguraj, Vieira, Fabio Rocha Jimenez, Tirichine, Leila
Published in The New phytologist (01.03.2021)
Published in The New phytologist (01.03.2021)
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Journal Article
New insights into immune genes and other expanded gene families of the house fly, Musca domestica , from an improved whole genome sequence
Meisel, Richard P., Freeman, Jamie C., Asgari, Danial, Llaca, Victor, Fengler, Kevin A., Mann, David, Rastogi, Achal, Loso, Mike, Geng, Chaoxian, Scott, Jeffrey G.
Published in Archives of insect biochemistry and physiology (01.11.2023)
Published in Archives of insect biochemistry and physiology (01.11.2023)
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Whole genome sequencing of an ethnic Pathan (Pakhtun) from the north-west of Pakistan
Ilyas, Muhammad, Kim, Jong-Soo, Cooper, Jesse, Shin, Young-Ah, Kim, Hak-Min, Cho, Yun Sung, Hwang, Seungwoo, Kim, Hyunho, Moon, Jaewoo, Chung, Oksung, Jun, JeHoon, Rastogi, Achal, Song, Sanghoon, Ko, Junsu, Manica, Andrea, Rahman, Ziaur, Husnain, Tayyab, Bhak, Jong
Published in BMC genomics (12.03.2015)
Published in BMC genomics (12.03.2015)
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Journal Article
Genome wide natural variation of H3K27me3 selectively marks genes predicted to be important for cell differentiation in Phaeodactylum tricornutum
Zhao, Xue, Rastogi, Achal, Anne Flore Deton Cabanillas, Ouardia Ait Mohamed, Cantrel, Catherine, Lombard, Berangère, Murik, Omer, Genovesio, Auguste, Bowler, Chris, Bouyer, Daniel, Loew, Damarys, Lin, Xin, Veluchamy, Alaguraj, Fabio Rocha Jimenez Vieira, Tirichine, Leila
Published in bioRxiv (07.12.2020)
Published in bioRxiv (07.12.2020)
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Paper
A genomics approach reveals the global genetic polymorphism, structure and functional diversity of ten accessions of the marine model diatom Phaeodactylum tricornutum
Rastogi, Achal, Fabio Rocha Jimenez Vieira, Anne Flore Deton Cabanilas, Veluchamy, Alaguraj, Cantrel, Catherine, Wang, Gaohong, Vanormelingen, Pieter, Bowler, Chris, Piganeau, Gwenael, Hu, Hanhua, Tirichine, Leila
Published in bioRxiv (24.08.2019)
Published in bioRxiv (24.08.2019)
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Paper
Integrative analysis of large scale transcriptome data draws a comprehensive functional landscape of Phaeodactylum tricornutum genome and evolutionary origin of diatoms
Rastogi, Achal, Maheswari, Uma, Dorrell, Richard G, Maumus, Florian, Fabio Rocha Jimenez Vieira, Kustka, Adam, Mccarthy, James, Allen, Andy E, Kersey, Paul, Bowler, Chris, Tirichine, Leila
Published in bioRxiv (18.08.2017)
Published in bioRxiv (18.08.2017)
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Paper