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KOREN, Sergey, SCHATZ, Michael C, PHILLIPPY, Adam M, WALENZ, Brian P, MARTIN, Jeffrey, HOWARD, Jason T, GANAPATHY, Ganeshkumar, ZHONG WANG, RASKO, David A, RICHARD MCCOMBIE, W, JARVIS, Erich D
Published in Nature biotechnology (01.07.2012)
Published in Nature biotechnology (01.07.2012)
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Genomic diversity of non-diarrheagenic fecal Escherichia coli from children in sub-Saharan Africa and south Asia and their relatedness to diarrheagenic E. coli
Hazen, Tracy H, Michalski, Jane M, Tennant, Sharon M, Rasko, David A
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Published in Nature communications (14.03.2023)
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Best practices on the differential expression analysis of multi-species RNA-seq
Chung, Matthew, Bruno, Vincent M, Rasko, David A, Cuomo, Christina A, Muñoz, José F, Livny, Jonathan, Shetty, Amol C, Mahurkar, Anup, Dunning Hotopp, Julie C
Published in Genome Biology (29.04.2021)
Published in Genome Biology (29.04.2021)
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Host-specific induction of Escherichia coli fitness genes during human urinary tract infection
Subashchandrabose, Sargurunathan, Hazen, Tracy H., Brumbaugh, Ariel R., Hirnpsl, Stephanie D., Smith, Sara N., Ernst, Robert D., Rasko, David A., Mobley, Harry L. T.
Published in Proceedings of the National Academy of Sciences - PNAS (23.12.2014)
Published in Proceedings of the National Academy of Sciences - PNAS (23.12.2014)
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The QseC adrenergic signaling cascade in Enterohemorrhagic E. coli (EHEC)
Hughes, David T, Clarke, Marcie B, Yamamoto, Kaneyoshi, Rasko, David A, Sperandio, Vanessa
Published in PLoS pathogens (01.08.2009)
Published in PLoS pathogens (01.08.2009)
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Locus of Adhesion and Autoaggregation (LAA), a pathogenicity island present in emerging Shiga Toxin-producing Escherichia coli strains
Montero, David A, Velasco, Juliana, Del Canto, Felipe, Puente, Jose L, Padola, Nora L, Rasko, David A, Farfán, Mauricio, Salazar, Juan C, Vidal, Roberto
Published in Scientific reports (01.08.2017)
Published in Scientific reports (01.08.2017)
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The Pangenome Structure of Escherichia coli: Comparative Genomic Analysis of E. coli Commensal and Pathogenic Isolates
RASKO, David A, ROSOVITZ, M. J, HENDERSON, Ian R, SPERANDIO, Vanessa, RAVEL, Jacques, MYERS, Garry S. A, MONGODIN, Emmanuel F, FRICKE, W. Florian, GAJER, Pawel, CRABTREE, Jonathan, SEBAIHIA, Mohammed, THOMSON, Nicholas R, CHAUDHURI, Roy
Published in Journal of Bacteriology (01.10.2008)
Published in Journal of Bacteriology (01.10.2008)
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Enterotoxigenic Escherichia coli Secretes a Highly Conserved Mucin-Degrading Metalloprotease To Effectively Engage Intestinal Epithelial Cells
Luo, Qingwei, Kumar, Pardeep, Vickers, Tim J, Sheikh, Alaullah, Lewis, Warren G, Rasko, David A, Sistrunk, Jeticia, Fleckenstein, James M
Published in Infection and Immunity (01.02.2014)
Published in Infection and Immunity (01.02.2014)
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An integrated genomic and transcriptomic survey of mucormycosis-causing fungi
Chibucos, Marcus C, Soliman, Sameh, Gebremariam, Teclegiorgis, Lee, Hongkyu, Daugherty, Sean, Orvis, Joshua, Shetty, Amol C, Crabtree, Jonathan, Hazen, Tracy H, Etienne, Kizee A, Kumari, Priti, O'Connor, Timothy D, Rasko, David A, Filler, Scott G, Fraser, Claire M, Lockhart, Shawn R, Skory, Christopher D, Ibrahim, Ashraf S, Bruno, Vincent M
Published in Nature communications (22.07.2016)
Published in Nature communications (22.07.2016)
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Molecular mechanisms of enterotoxigenic Escherichia coli infection
Fleckenstein, James M., Hardwidge, Philip R., Munson, George P., Rasko, David A., Sommerfelt, Halvor, Steinsland, Hans
Published in Microbes and infection (01.02.2010)
Published in Microbes and infection (01.02.2010)
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Characterization of the Complete Zwittermicin A Biosynthesis Gene Cluster from Bacillus cereus
Kevany, Brian M, Rasko, David A, Thomas, Michael G
Published in Applied and Environmental Microbiology (01.02.2009)
Published in Applied and Environmental Microbiology (01.02.2009)
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Targeting QseC Signaling and Virulence for Antibiotic Development
Rasko, David A, Moreira, Cristiano G, Li, De Run, Reading, Nicola C, Ritchie, Jennifer M, Waldor, Matthew K, Williams, Noelle, Taussig, Ron, Wei, Shuguang, Roth, Michael, Hughes, David T, Huntley, Jason F, Fina, Maggy W, Falck, John R, Sperandio, Vanessa
Published in Science (American Association for the Advancement of Science) (22.08.2008)
Published in Science (American Association for the Advancement of Science) (22.08.2008)
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Refining the pathovar paradigm via phylogenomics of the attaching and effacing Escherichia coli
Hazen, Tracy H., Sahl, Jason W., Fraser, Claire M., Donnenberg, Michael S., Scheutz, Flemming, Rasko, David A.
Published in Proceedings of the National Academy of Sciences - PNAS (30.07.2013)
Published in Proceedings of the National Academy of Sciences - PNAS (30.07.2013)
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Comparative genomics and transcriptomics of Escherichia coli isolates carrying virulence factors of both enteropathogenic and enterotoxigenic E. coli
Hazen, Tracy H, Michalski, Jane, Luo, Qingwei, Shetty, Amol C, Daugherty, Sean C, Fleckenstein, James M, Rasko, David A
Published in Scientific reports (14.06.2017)
Published in Scientific reports (14.06.2017)
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