A community-driven resource for genomic epidemiology and antimicrobial resistance prediction of Neisseria gonorrhoeae at Pathogenwatch
Sánchez-Busó, Leonor, Yeats, Corin A, Taylor, Benjamin, Goater, Richard J, Underwood, Anthony, Abudahab, Khalil, Argimón, Silvia, Ma, Kevin C, Mortimer, Tatum D, Golparian, Daniel, Cole, Michelle J, Grad, Yonatan H, Martin, Irene, Raphael, Brian H, Shafer, William M, Town, Katy, Wi, Teodora, Harris, Simon R, Unemo, Magnus, Aanensen, David M
Published in Genome medicine (19.04.2021)
Published in Genome medicine (19.04.2021)
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Characterization of a Neisseria gonorrhoeae Ciprofloxacin panel for an antimicrobial resistant Isolate Bank
Liu, Hsi, Tang, Kevin, Pham, Cau D, Schmerer, Matthew, Kersh, Ellen N, Raphael, Brian H
Published in PloS one (10.03.2022)
Published in PloS one (10.03.2022)
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Phylogenomic analysis reveals persistence of gonococcal strains with reduced-susceptibility to extended-spectrum cephalosporins and mosaic penA-34
Thomas, Jesse C., Joseph, Sandeep J., Cartee, John C., Pham, Cau D., Schmerer, Matthew W., Schlanger, Karen, St. Cyr, Sancta B., Kersh, Ellen N., Raphael, Brian H., Dominguez, Cathy, Patel, Ami, Loomis, Jillian, Hun, Sopheay, Ruiz, Ryan, Talosig, Nicole, Hua, Chi, Zhang, Jenny, Oh, Bonnie, Leavitt, John, Moore, Christina, Perry, Zach
Published in Nature communications (21.06.2021)
Published in Nature communications (21.06.2021)
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Legionnaires' Disease Outbreak Caused by Endemic Strain of Legionella pneumophila, New York, New York, USA, 2015
Lapierre, Pascal, Nazarian, Elizabeth, Zhu, Yan, Wroblewski, Danielle, Saylors, Amy, Passaretti, Teresa, Hughes, Scott, Tran, Anthony, Lin, Ying, Kornblum, John, Morrison, Shatavia S, Mercante, Jeffrey W, Fitzhenry, Robert, Weiss, Don, Raphael, Brian H, Varma, Jay K, Zucker, Howard A, Rakeman, Jennifer L, Musser, Kimberlee A
Published in Emerging infectious diseases (01.11.2017)
Published in Emerging infectious diseases (01.11.2017)
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Genomic Resolution of Outbreak-Associated Legionella pneumophila Serogroup 1 Isolates from New York State
Raphael, Brian H, Baker, Deborah J, Nazarian, Elizabeth, Lapierre, Pascal, Bopp, Dianna, Kozak-Muiznieks, Natalia A, Morrison, Shatavia S, Lucas, Claressa E, Mercante, Jeffrey W, Musser, Kimberlee A, Winchell, Jonas M
Published in Applied and environmental microbiology (15.06.2016)
Published in Applied and environmental microbiology (15.06.2016)
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Genomic heterogeneity differentiates clinical and environmental subgroups of Legionella pneumophila sequence type 1
Mercante, Jeffrey W, Caravas, Jason A, Ishaq, Maliha K, Kozak-Muiznieks, Natalia A, Raphael, Brian H, Winchell, Jonas M
Published in PloS one (18.10.2018)
Published in PloS one (18.10.2018)
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Sequence Diversity of Genes Encoding Botulinum Neurotoxin Type F
Raphael, Brian H, Choudoir, Mallory J, Lúquez, Carolina, Fernández, Rafael, Maslanka, Susan E
Published in Applied and Environmental Microbiology (01.07.2010)
Published in Applied and Environmental Microbiology (01.07.2010)
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Comparative genome analysis reveals a complex population structure of Legionella pneumophila subspecies
Kozak-Muiznieks, Natalia A., Morrison, Shatavia S., Mercante, Jeffrey W., Ishaq, Maliha K., Johnson, Taccara, Caravas, Jason, Lucas, Claressa E., Brown, Ellen, Raphael, Brian H., Winchell, Jonas M.
Published in Infection, genetics and evolution (01.04.2018)
Published in Infection, genetics and evolution (01.04.2018)
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Azithromycin susceptibility of Neisseria gonorrhoeae in the USA in 2017: a genomic analysis of surveillance data
Gernert, Kim M, Seby, Sandra, Schmerer, Matthew W, Thomas, Jesse C, Pham, Cau D, St Cyr, Sancta, Schlanger, Karen, Weinstock, Hillard, Shafer, William M, Raphael, Brian H, Kersh, Ellen N, Hun, Sopheay, Hua, Chi, Ruiz, Ryan, Soge, Olusegun O, Dominguez, Catherine, Patel, Ami, Loomis, Jillian, Leavitt, John, Zhang, Jenny, Baldwin, Tamara, Wang, Chun, Moore, Christina, Whelen, Christian, O'Brien, Pamela, Harvey, Alesia
Published in The Lancet. Microbe (01.08.2020)
Published in The Lancet. Microbe (01.08.2020)
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Neurotoxin Gene Clusters in Clostridium botulinum Type Ab Strains
Lúquez, Carolina, Raphael, Brian H, Maslanka, Susan E
Published in Applied and Environmental Microbiology (01.10.2009)
Published in Applied and Environmental Microbiology (01.10.2009)
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Whole-Genome Enrichment and Sequencing of Chlamydia trachomatis Directly from Patient Clinical Vaginal and Rectal Swabs
Bowden, Katherine E, Joseph, Sandeep J, Cartee, John C, Ziklo, Noa, Danavall, Damien, Raphael, Brian H, Read, Timothy D, Dean, Deborah
Published in mSphere (03.03.2021)
Published in mSphere (03.03.2021)
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Analysis of a unique Clostridium botulinum strain from the Southern hemisphere producing a novel type E botulinum neurotoxin subtype
Raphael, Brian H, Lautenschlager, Matthew, Kalb, Suzanne R, de Jong, Laura I T, Frace, Michael, Lúquez, Carolina, Barr, John R, Fernández, Rafael A, Maslanka, Susan E
Published in BMC microbiology (31.10.2012)
Published in BMC microbiology (31.10.2012)
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At-Home Specimen Self-Collection and Self-Testing for Sexually Transmitted Infection Screening Demand Accelerated by the COVID-19 Pandemic: a Review of Laboratory Implementation Issues
Kersh, Ellen N, Shukla, Mayur, Raphael, Brian H, Habel, Melissa, Park, Ina
Published in Journal of clinical microbiology (19.10.2021)
Published in Journal of clinical microbiology (19.10.2021)
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First Report Worldwide of an Infant Botulism Case Due to Clostridium botulinum Type E
Lúquez, Carolina, Dykes, Janet K, Yu, Patricia A, Raphael, Brian H, Maslanka, Susan E
Published in Journal of Clinical Microbiology (01.01.2010)
Published in Journal of Clinical Microbiology (01.01.2010)
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Historical and current perspectives on Clostridium botulinum diversity
Smith, Theresa J., Hill, Karen K., Raphael, Brian H.
Published in Research in microbiology (01.05.2015)
Published in Research in microbiology (01.05.2015)
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