public resource facilitating clinical use of genomes
Ball, Madeleine P, Thakuria, Joseph V, Zaranek, Alexander Wait, Clegg, Tom, Rosenbaum, Abraham M, Wu, Xiaodi, Angrist, Misha, Bhak, Jong, Bobe, Jason, Callow, Matthew J, Cano, Carlos, Chou, Michael F, Chung, Wendy K, Douglas, Shawn M, Estep, Preston W, Gore, Athurva, Hulick, Peter, Labarga, Alberto, Lee, Je-Hyuk, Lunshof, Jeantine E, Kim, Byung Chul, Kim, Jong-Il, Li, Zhe, Murray, Michael F, Nilsen, Geoffrey B, Peters, Brock A, Raman, Anugraha M, Rienhoff, Hugh Y, Robasky, Kimberly, Wheeler, Matthew T, Vandewege, Ward, Vorhaus, Daniel B, Yang, Joyce L, Yang, Luhan, Aach, John, Ashley, Euan A, Drmanac, Radoje, Kim, Seong-Jin, Li, Jin Billy, Peshkin, Leonid, Seidman, Christine E, Seo, Jeong-Sun, Zhang, Kun, Rehm, Heidi L, Church, George M
Published in Proceedings of the National Academy of Sciences - PNAS (24.07.2012)
Published in Proceedings of the National Academy of Sciences - PNAS (24.07.2012)
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A BioBrick compatible strategy for genetic modification of plants
Boyle, Patrick M, Burrill, Devin R, Inniss, Mara C, Agapakis, Christina M, Deardon, Aaron, DeWerd, Jonathan G, Gedeon, Michael A, Quinn, Jacqueline Y, Paull, Morgan L, Raman, Anugraha M, Theilmann, Mark R, Wang, Lu, Winn, Julia C, Medvedik, Oliver, Schellenberg, Kurt, Haynes, Karmella A, Viel, Alain, Brenner, Tamara J, Church, George M, Shah, Jagesh V, Silver, Pamela A
Published in Journal of biological engineering (20.06.2012)
Published in Journal of biological engineering (20.06.2012)
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Systematic analysis of binding of transcription factors to noncoding variants
Yan, Jian, Qiu, Yunjiang, Ribeiro dos Santos, André M., Yin, Yimeng, Li, Yang E., Vinckier, Nick, Nariai, Naoki, Benaglio, Paola, Raman, Anugraha, Li, Xiaoyu, Fan, Shicai, Chiou, Joshua, Chen, Fulin, Frazer, Kelly A., Gaulton, Kyle J., Sander, Maike, Taipale, Jussi, Ren, Bing
Published in Nature (London) (04.03.2021)
Published in Nature (London) (04.03.2021)
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EPCO-19. INTEGRATED ANALYSIS OF INTRA-TUMORAL HETEROGENEITY IN GLIOBLASTOMAS THROUGH SINGLE NUCLEI ATAC-SEQ AND RNA-SEQ
Raviram, Ramya, Raman, Anugraha, Preissl, Sebastian, Ning, Jianfang, Wu, Shaoping, Deynze, Kinsey, Chen, Clark, Ren, Bing
Published in Neuro-oncology (Charlottesville, Va.) (09.11.2020)
Published in Neuro-oncology (Charlottesville, Va.) (09.11.2020)
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Integrated analysis of single-cell chromatin state and transcriptome identified common vulnerability despite glioblastoma heterogeneity
Raviram, Ramya, Raman, Anugraha, Preissl, Sebastian, Ning, Jiangfang, Wu, Shaoping, Koga, Tomoyuki, Zhang, Kai, Brennan, Cameron W, Zhu, Chenxu, Luebeck, Jens, Van Deynze, Kinsey, Han, Jee Yun, Hou, Xiaomeng, Ye, Zhen, Mischel, Anna K, Li, Yang Eric, Fang, Rongxin, Baback, Tomas, Mugford, Joshua, Han, Claudia Z, Glass, Christopher K, Barr, Cathy L, Mischel, Paul S, Bafna, Vineet, Escoubet, Laure, Ren, Bing, Chen, Clark C
Published in Proceedings of the National Academy of Sciences - PNAS (16.05.2023)
Published in Proceedings of the National Academy of Sciences - PNAS (16.05.2023)
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DDDR-24. INTEGRATED ANALYSIS OF SINGLE CELL CHROMATIN ACCESSIBILITY AND RNA EXPRESSION IDENTIFIED COMMON VULNERABILITY DESPITE GLIOBLASTOMA HETEROGENEITY
Raviram, Ramya, Raman, Anugraha, Preissl, Sebastian, Wu, Shaoping, Koga, Tomoyuki, Zhu, Chenxu, Luebeck, Jens, Van Deynze, Kinsey, Han, Jee Yun, Hou, Xioameng, Ye, Zhen, Mischel, Anna, Li, Yang Eric, Fang, Rongxin, Baback, Tomas, Mugford, Joshua, Han, Claudia, Glass, Christopher, Barr, Cathy, Mischel, Paul, Bafna, Vineet, Escoubet, Laura, Ren, Bing, Chen, Clark
Published in Neuro-oncology (Charlottesville, Va.) (14.11.2022)
Published in Neuro-oncology (Charlottesville, Va.) (14.11.2022)
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Systematic Analysis of Transcription Factors Binding to Noncoding Variants
Yan, Jian, Qiu, Yunjiang, Ribeiro dos Santos, André M, Yin, Yimeng, Li, Yang E., Vinckier, Nick, Nariai, Naoki, Benaglio, Paola, Raman, Anugraha, Li, Xiaoyu, Fan, Shicai, Chiou, Joshua, Chen, Fulin, Frazer, Kelly A., Gaulton, Kyle J., Sander, Maike, Taipale, Jussi, Ren, Bing
Published in Nature (London) (27.01.2021)
Published in Nature (London) (27.01.2021)
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Abstract 3908: DHX9 inhibition as a novel therapeutic for cancer with loss-of-function mutations in DNA damage repair genes BRCA1 and BRCA2
Castro, Jennifer B., Daniels, Matthew H., Nayak, Sunaina, Laidlaw, Monique, Brennan, David, Johnston, Brian T., Wu, Jie, Raman, Anugraha, Lu, Chuang, Blakemore, Stephen J., Silver, Serena J., Boriack-Sjodin, P. Ann, Duncan, Kenneth W., Sager, Jason A., Copeland, Robert A.
Published in Cancer research (Chicago, Ill.) (22.03.2024)
Published in Cancer research (Chicago, Ill.) (22.03.2024)
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Abstract PR003: DHX9 inhibition as a novel therapeutic for ovarian and breast cancer with loss-of-function mutations in the DNA damage repair genes BRCA1 or BRCA2
Castro, Jennifer, Daniels, Matthew H., Pai, Sunaina, Laidlaw, Monique, Wu, Jie, Brennan, David, Johnston, Brian T., Raman, Anugraha, Lu, Chuang, Blakemore, Stephen J., Silver, Serena J., Boriack-Sjodin, P. Ann, Duncan, Kenneth W., Sager, Jason A., Copeland, Robert A.
Published in Cancer research (Chicago, Ill.) (09.01.2024)
Published in Cancer research (Chicago, Ill.) (09.01.2024)
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Abstract SY11-02: Small molecule inhibitors of RNA modifying enzymes as precision cancer therapeutics
Copeland, Robert A., Castro, Jennifer, Daniels, Matthew H., Gotur, Deepali, Lee, Young-Tae, Yao, Shihua, Brennan, David, Johnston, Brian T., Laidlaw, Monique, Pai, Sunaina, Wu, Jie, Bansal, Rishabh, Raman, Anugraha, Buker, Shane M., Liu, Julie, Sickmier, E. Allen, Knockenhauer, Kevin, Lu, Chuang, Blakemore, Stephen J., Silver, Serena J., Boriack-Sjodin, P. Ann, Duncan, Kenneth W., Sager, Jason A.
Published in Cancer research (Chicago, Ill.) (05.04.2024)
Published in Cancer research (Chicago, Ill.) (05.04.2024)
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Abstract C087: DHX9 inhibition as a novel therapeutic modality in microsatellite instable colorectal cancer
Castro, Jennifer, Daniels, Matthew H, Brennan, David, Johnston, Brian T, Bansal, Rishabh, Laidlaw, Monique, Lu, Chuang, Gotur, Deepali, Lee, Young-Tae, Knockenhauer, Kevin, Case, April, Wu, Jie, Raman, Anugraha, Cheong, Jae Eun, Liu, Julie, Buker, Shane M, Sickmier, E. Allen, Blakemore, Stephen J, Boriack-Sjodin, P. Ann, Duncan, Kenneth W, Silver, Serena J, Ribich, Scott, Copeland, Robert A
Published in Molecular cancer therapeutics (01.12.2023)
Published in Molecular cancer therapeutics (01.12.2023)
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Abstract A170: Discovery of small molecule inhibitors of ADAR1
Buker, Shane M, Blakemore, Stephen J, Boriack-Sjodin, P. Ann, Collins, Cindy, Copeland, Robert A, Duncan, Kenneth W, Ericsson, Anna, Garadino, Alexandra, Greene-Colozzi, April, Leger, Nathalie, Lockbaum, Gordon, Raman, Anugraha, Ribich, Scott, Sickmier, Allen, Sparling, Brian S, Wu, Jie, Silver, Serena
Published in Molecular cancer therapeutics (01.12.2023)
Published in Molecular cancer therapeutics (01.12.2023)
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