knowledge‐based molecular screen uncovers a broad‐spectrum OsSWEET14 resistance allele to bacterial blight from wild rice
Hutin, Mathilde, Sabot, François, Ghesquière, Alain, Koebnik, Ralf, Szurek, Boris
Published in The Plant journal : for cell and molecular biology (01.11.2015)
Published in The Plant journal : for cell and molecular biology (01.11.2015)
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Targeted promoter editing for rice resistance to Xanthomonas oryzae pv. oryzae reveals differential activities for SWEET14‐inducing TAL effectors
Blanvillain‐Baufumé, Servane, Reschke, Maik, Solé, Montserrat, Auguy, Florence, Doucoure, Hinda, Szurek, Boris, Meynard, Donaldo, Portefaix, Murielle, Cunnac, Sébastien, Guiderdoni, Emmanuel, Boch, Jens, Koebnik, Ralf
Published in Plant biotechnology journal (01.03.2017)
Published in Plant biotechnology journal (01.03.2017)
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High genomic plasticity and unique features of Xanthomonas translucens pv. graminis revealed through comparative analysis of complete genome sequences
Goettelmann, Florian, Koebnik, Ralf, Roman-Reyna, Veronica, Studer, Bruno, Kölliker, Roland
Published in BMC genomics (05.12.2023)
Published in BMC genomics (05.12.2023)
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The rhizobial type III effector ErnA confers the ability to form nodules in legumes
Teulet, Albin, Busset, Nicolas, Fardoux, Joël, Gully, Djamel, Chaintreuil, Clémence, Cartieaux, Fabienne, Jauneau, Alain, Comorge, Virginie, Okazaki, Shin, Kaneko, Takakazu, Gressent, Frédéric, Nouwen, Nico, Arrighi, Jean-François, Koebnik, Ralf, Mergaert, Peter, Deslandes, Laurent, Giraud, Eric
Published in Proceedings of the National Academy of Sciences - PNAS (22.10.2019)
Published in Proceedings of the National Academy of Sciences - PNAS (22.10.2019)
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type III effectors of Xanthomonas
WHITE, FRANK F, POTNIS, NEHA, JONES, JEFFREY B, KOEBNIK, RALF
Published in Molecular plant pathology (01.11.2009)
Published in Molecular plant pathology (01.11.2009)
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Functional analysis of African Xanthomonas oryzae pv. oryzae TALomes reveals a new susceptibility gene in bacterial leaf blight of rice
Tran, Tuan T, Pérez-Quintero, Alvaro L, Wonni, Issa, Carpenter, Sara C D, Yu, Yanhua, Wang, Li, Leach, Jan E, Verdier, Valérie, Cunnac, Sébastien, Bogdanove, Adam J, Koebnik, Ralf, Hutin, Mathilde, Szurek, Boris
Published in PLoS pathogens (01.06.2018)
Published in PLoS pathogens (01.06.2018)
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AnnoTALE: bioinformatics tools for identification, annotation and nomenclature of TALEs from Xanthomonas genomic sequences
Grau, Jan, Reschke, Maik, Erkes, Annett, Streubel, Jana, Morgan, Richard D., Wilson, Geoffrey G., Koebnik, Ralf, Boch, Jens
Published in Scientific reports (15.02.2016)
Published in Scientific reports (15.02.2016)
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An atypical class of non-coding small RNAs is produced in rice leaves upon bacterial infection
Reshetnyak, Ganna, Jacobs, Jonathan M., Auguy, Florence, Sciallano, Coline, Claude, Lisa, Medina, Clemence, Perez-Quintero, Alvaro L., Comte, Aurore, Thomas, Emilie, Bogdanove, Adam, Koebnik, Ralf, Szurek, Boris, Dievart, Anne, Brugidou, Christophe, Lacombe, Severine, Cunnac, Sebastien
Published in Scientific reports (17.12.2021)
Published in Scientific reports (17.12.2021)
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Colonization of Rice Leaf Blades by an African Strain of Xanthomonas oryzae pv. oryzae Depends on a New TAL Effector That Induces the Rice Nodulin-3 Os11N3 Gene
Yu, Yanhua, Streubel, Jana, Balzergue, Sandrine, Champion, Antony, Boch, Jens, Koebnik, Ralf, Feng, Jiaxun, Verdier, Valérie, Szurek, Boris
Published in Molecular plant-microbe interactions (01.09.2011)
Published in Molecular plant-microbe interactions (01.09.2011)
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Design of a new multiplex PCR assay for rice pathogenic bacteria detection and its application to infer disease incidence and detect co-infection in rice fields in Burkina Faso
Bangratz, Martine, Wonni, Issa, Kini, Kossi, Sondo, Moussa, Brugidou, Christophe, Béna, Gilles, Gnacko, Fatoumata, Barro, Mariam, Koebnik, Ralf, Silué, Drissa, Tollenaere, Charlotte
Published in PloS one (27.04.2020)
Published in PloS one (27.04.2020)
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Comparative genomics reveals diversity among xanthomonads infecting tomato and pepper
Potnis, Neha, Krasileva, Ksenia, Chow, Virginia, Almeida, Nalvo F, Patil, Prabhu B, Ryan, Robert P, Sharlach, Molly, Behlau, Franklin, Dow, J Max, Momol, Mt, White, Frank F, Preston, James F, Vinatzer, Boris A, Koebnik, Ralf, Setubal, João C, Norman, David J, Staskawicz, Brian J, Jones, Jeffrey B
Published in BMC genomics (11.03.2011)
Published in BMC genomics (11.03.2011)
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A minisatellite-based MLVA for deciphering the global epidemiology of the bacterial cassava pathogen Xanthomonas phaseoli pv. manihotis
Rache, Leidy, Blondin, Laurence, Diaz Tatis, Paula, Flores, Carolina, Camargo, Andrea, Kante, Moussa, Wonni, Issa, López, Camilo, Szurek, Boris, Dupas, Stephane, Pruvost, Olivier, Koebnik, Ralf, Restrepo, Silvia, Bernal, Adriana, Vernière, Christian
Published in PloS one (11.05.2023)
Published in PloS one (11.05.2023)
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Assembling highly repetitive Xanthomonas TALomes using Oxford Nanopore sequencing
Erkes, Annett, Grove, René P, Žarković, Milena, Krautwurst, Sebastian, Koebnik, Ralf, Morgan, Richard D, Wilson, Geoffrey G, Hölzer, Martin, Marz, Manja, Boch, Jens, Grau, Jan
Published in BMC genomics (27.03.2023)
Published in BMC genomics (27.03.2023)
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Complete Genome Assemblies of All Xanthomonas translucens Pathotype Strains Reveal Three Genetically Distinct Clades
Goettelmann, Florian, Roman-Reyna, Veronica, Cunnac, Sébastien, Jacobs, Jonathan M, Bragard, Claude, Studer, Bruno, Koebnik, Ralf, Kölliker, Roland
Published in Frontiers in microbiology (02.03.2022)
Published in Frontiers in microbiology (02.03.2022)
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Comparative transcriptomics reveals a highly polymorphic Xanthomonas HrpG virulence regulon
Monnens, Thomas Quiroz, Roux, Brice, Cunnac, Sébastien, Charbit, Erika, Carrère, Sébastien, Lauber, Emmanuelle, Jardinaud, Marie-Françoise, Darrasse, Armelle, Arlat, Matthieu, Szurek, Boris, Pruvost, Olivier, Jacques, Marie-Agnès, Gagnevin, Lionel, Koebnik, Ralf, Noël, Laurent D, Boulanger, Alice
Published in BMC genomics (09.08.2024)
Published in BMC genomics (09.08.2024)
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An improved method for TAL effectors DNA-binding sites prediction reveals functional convergence in TAL repertoires of Xanthomonas oryzae strains
Pérez-Quintero, Alvaro L, Rodriguez-R, Luis M, Dereeper, Alexis, López, Camilo, Koebnik, Ralf, Szurek, Boris, Cunnac, Sebastien
Published in PloS one (15.07.2013)
Published in PloS one (15.07.2013)
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