High-Throughput Mapping of B Cell Receptor Sequences to Antigen Specificity
Setliff, Ian, Shiakolas, Andrea R., Pilewski, Kelsey A., Murji, Amyn A., Mapengo, Rutendo E., Janowska, Katarzyna, Richardson, Simone, Oosthuysen, Charissa, Raju, Nagarajan, Ronsard, Larance, Kanekiyo, Masaru, Qin, Juliana S., Kramer, Kevin J., Greenplate, Allison R., McDonnell, Wyatt J., Graham, Barney S., Connors, Mark, Lingwood, Daniel, Acharya, Priyamvada, Morris, Lynn, Georgiev, Ivelin S.
Published in Cell (12.12.2019)
Published in Cell (12.12.2019)
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Journal Article
Multi-Donor Longitudinal Antibody Repertoire Sequencing Reveals the Existence of Public Antibody Clonotypes in HIV-1 Infection
Setliff, Ian, McDonnell, Wyatt J., Raju, Nagarajan, Bombardi, Robin G., Murji, Amyn A., Scheepers, Cathrine, Ziki, Rutendo, Mynhardt, Charissa, Shepherd, Bryan E., Mamchak, Alusha A., Garrett, Nigel, Karim, Salim Abdool, Mallal, Simon A., Crowe, James E., Morris, Lynn, Georgiev, Ivelin S.
Published in Cell host & microbe (13.06.2018)
Published in Cell host & microbe (13.06.2018)
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Journal Article
Single-cell profiling of the antigen-specific response to BNT162b2 SARS-CoV-2 RNA vaccine
Kramer, Kevin J, Wilfong, Erin M, Voss, Kelsey, Barone, Sierra M, Shiakolas, Andrea R, Raju, Nagarajan, Roe, Caroline E, Suryadevara, Naveenchandra, Walker, Lauren M, Wall, Steven C, Paulo, Ariana, Schaefer, Samuel, Dahunsi, Debolanle, Westlake, Camille S, Crowe, Jr, James E, Carnahan, Robert H, Rathmell, Jeffrey C, Bonami, Rachel H, Georgiev, Ivelin S, Irish, Jonathan M
Published in Nature communications (16.06.2022)
Published in Nature communications (16.06.2022)
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Potent neutralization of SARS-CoV-2 variants of concern by an antibody with an uncommon genetic signature and structural mode of spike recognition
Kramer, Kevin J., Johnson, Nicole V., Shiakolas, Andrea R., Suryadevara, Naveenchandra, Periasamy, Sivakumar, Raju, Nagarajan, Williams, Jazmean K., Wrapp, Daniel, Zost, Seth J., Walker, Lauren M., Wall, Steven C., Holt, Clinton M., Hsieh, Ching-Lin, Sutton, Rachel E., Paulo, Ariana, Nargi, Rachel S., Davidson, Edgar, Doranz, Benjamin J., Crowe, James E., Bukreyev, Alexander, Carnahan, Robert H., McLellan, Jason S., Georgiev, Ivelin S.
Published in Cell reports (Cambridge) (05.10.2021)
Published in Cell reports (Cambridge) (05.10.2021)
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Cross-reactive coronavirus antibodies with diverse epitope specificities and Fc effector functions
Shiakolas, Andrea R., Kramer, Kevin J., Wrapp, Daniel, Richardson, Simone I., Schäfer, Alexandra, Wall, Steven, Wang, Nianshuang, Janowska, Katarzyna, Pilewski, Kelsey A., Venkat, Rohit, Parks, Robert, Manamela, Nelia P., Raju, Nagarajan, Fechter, Emilee Friedman, Holt, Clinton M., Suryadevara, Naveenchandra, Chen, Rita E., Martinez, David R., Nargi, Rachel S., Sutton, Rachel E., Ledgerwood, Julie E., Graham, Barney S., Diamond, Michael S., Haynes, Barton F., Acharya, Priyamvada, Carnahan, Robert H., Crowe, James E., Baric, Ralph S., Morris, Lynn, McLellan, Jason S., Georgiev, Ivelin S.
Published in Cell reports. Medicine (15.06.2021)
Published in Cell reports. Medicine (15.06.2021)
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Journal Article
High-Throughput B Cell Epitope Determination by Next-Generation Sequencing
Walker, Lauren M, Shiakolas, Andrea R, Venkat, Rohit, Liu, Zhaojing Ariel, Wall, Steven, Raju, Nagarajan, Pilewski, Kelsey A, Setliff, Ian, Murji, Amyn A, Gillespie, Rebecca, Makoah, Nigel A, Kanekiyo, Masaru, Connors, Mark, Morris, Lynn, Georgiev, Ivelin S
Published in Frontiers in immunology (23.03.2022)
Published in Frontiers in immunology (23.03.2022)
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Longitudinal Antibody Responses in People Who Inject Drugs Infected With Similar Human Immunodeficiency Virus Strains
Redd, Andrew D, Doria-Rose, Nicole A, Weiner, Joshua A, Nason, Martha, Seivers, Matthew, Schmidt, Stephen D, Laeyendecker, Oliver, Martens, Craig, Bruno, Daniel, Keele, Brandon F, Raju, Nagarajan, Georgiev, Ivelin S, Lamers, Susanna L, Astemborski, Jacquie, Kirk, Gregory D, Mascola, John R, Ackerman, Margaret E, Mehta, Shruti H, Quinn, Thomas C
Published in The Journal of infectious diseases (18.02.2020)
Published in The Journal of infectious diseases (18.02.2020)
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Journal Article
Do we see what we should see? Describing non-covalent interactions in protein structures including precision
Gurusaran, Manickam, Shankar, Mani, Nagarajan, Raju, Helliwell, John R, Sekar, Kanagaraj
Published in IUCrJ (01.01.2014)
Published in IUCrJ (01.01.2014)
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Journal Article
Sequence and functional characterization of a public HIV-specific antibody clonotype
Murji, Amyn A., Raju, Nagarajan, Qin, Juliana S., Kaldine, Haajira, Janowska, Katarzyna, Fechter, Emilee Friedman, Mapengo, Rutendo, Scheepers, Cathrine, Setliff, Ian, Acharya, Priyamvada, Morris, Lynn, Georgiev, Ivelin S.
Published in iScience (21.01.2022)
Published in iScience (21.01.2022)
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SARS-CoV-2 protein structure and sequence mutations: Evolutionary analysis and effects on virus variants
Lomoio, Ugo, Puccio, Barbara, Tradigo, Giuseppe, Guzzi, Pietro Hiram, Veltri, Pierangelo
Published in PloS one (20.07.2023)
Published in PloS one (20.07.2023)
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Genome-wide identification and analysis of Nrf2 binding sites – Antioxidant response elements in zebrafish
Raghunath, Azhwar, Nagarajan, Raju, Sundarraj, Kiruthika, Panneerselvam, Lakshmikanthan, Perumal, Ekambaram
Published in Toxicology and applied pharmacology (01.12.2018)
Published in Toxicology and applied pharmacology (01.12.2018)
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Bi-LSTM based vertical total electron content prediction at low-latitude equatorial ionization anomaly region of South India
Maheswaran, Veera Kumar, Baskaradas, James A., Nagarajan, Raju, Anbazhagan, Rajesh, Subramanian, Sriram, Devanaboyina, Venkata Ratnam, Das, Rupesh M.
Published in Advances in space research (01.04.2024)
Published in Advances in space research (01.04.2024)
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Identification of compounds that inhibit the binding of Keap1a/Keap1b Kelch DGR domain with Nrf2 ETGE/DLG motifs in zebrafish
Raghunath, Azhwar, Nagarajan, Raju, Sundarraj, Kiruthika, Palanisamy, Kavipriya, Perumal, Ekambaram
Published in Basic & clinical pharmacology & toxicology (01.09.2019)
Published in Basic & clinical pharmacology & toxicology (01.09.2019)
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Journal Article
The CARD8 inflammasome dictates HIV/SIV pathogenesis and disease progression
Wang, Qiankun, Clark, Kolin M., Tiwari, Ritudhwaj, Raju, Nagarajan, Tharp, Gregory K., Rogers, Jeffrey, Harris, R. Alan, Raveendran, Muthuswamy, Bosinger, Steven E., Burdo, Tricia H., Silvestri, Guido, Shan, Liang
Published in Cell (29.02.2024)
Published in Cell (29.02.2024)
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Therapeutic antibody discovery in lung tumors by B-cell receptor sequencing
Kramer, Kevin J, Raju, Nagarajan, Greenplate, Allison, Pilewski, Kelsey, Massion, Pierre, Georgiev, Ivelin
Published in The Journal of immunology (1950) (01.05.2019)
Published in The Journal of immunology (1950) (01.05.2019)
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Journal Article
Single-Cell Profiling of the Antigen-Specific Response to BNT162b2 SARS-CoV-2 RNA Vaccine
Kramer, Kevin J, Wilfong, Erin M, Voss, Kelsey, Barone, Sierra M, Shiakolas, Andrea R, Raju, Nagarajan, Roe, Caroline E, Suryadevara, Naveenchandra, Walker, Lauren, Wall, Steven C, Paulo, Ariana, Schaefer, Samuel, Dahunsi, Debolanle, Westlake, Camille S, Crowe, James E, Carnahan, Robert H, Rathmell, Jeffrey C, Bonami, Rachel H, Georgiev, Ivelin S, Irish, Jonathan M
Published in bioRxiv (28.07.2021)
Published in bioRxiv (28.07.2021)
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