transcriptomic response of the coral Acropora digitifera to a competent Symbiodinium strain: the symbiosome as an arrested early phagosome
Mohamed, A. R, V. Cumbo, S. Harii, C. Shinzato, C. X. Chan, M. A. Ragan, D. G. Bourne, B. L. Willis, E. E. Ball, N. Satoh, D. J. Miller
Published in Molecular ecology (01.07.2016)
Published in Molecular ecology (01.07.2016)
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Highways of Gene Sharing in Prokaryotes
Beiko, Robert G., Harlow, Timothy J., Ragan, Mark A., Woese, Carl R.
Published in Proceedings of the National Academy of Sciences - PNAS (04.10.2005)
Published in Proceedings of the National Academy of Sciences - PNAS (04.10.2005)
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Annotated genes and nonannotated genomes: cross-species use of Gene Ontology in ecology and evolution research
Primmer, C. R., Papakostas, S., Leder, E. H., Davis, M. J., Ragan, M. A.
Published in Molecular ecology (01.06.2013)
Published in Molecular ecology (01.06.2013)
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Abstract PD6-05: Identifying genetic vulnerabilities in cancers driven by defects in DNA-damage response
Srihari, S, Singla, J, Wong, L, Simpson, PT, Khanna, KK, Ragan, MA
Published in Cancer research (Chicago, Ill.) (15.02.2016)
Published in Cancer research (Chicago, Ill.) (15.02.2016)
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Detection of lateral gene transfer among microbial genomes
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Book Review
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The Complete Genome of the Crenarchaeon Sulfolobus solfataricus P2
She, Qunxin, Singh, Rama K., Confalonieri, Fabrice, Zivanovic, Yvan, Allard, Ghislaine, Awayez, Mariana J., Christina C.-Y. Chan-Weiher, Clausen, Ib Groth, Curtis, Bruce A., De Moors, Anick, Erauso, Gael, Fletcher, Cynthia, Paul M. K. Gordon, Jong, Ineke Heikamp-de, Jeffries, Alex C., Kozera, Catherine J., Medina, Nadine, Peng, Xu, Thi-Ngoc, Hoa Phan, Redder, Peter, Schenk, Margaret E., Theriault, Cynthia, Tolstrup, Niels, Charlebois, Robert L., Doolittle, W. Ford, Duguet, Michel, Gaasterland, Terry, Garrett, Roger A., Ragan, Mark A., Sensen, Christoph W., Van der Oost, John
Published in Proceedings of the National Academy of Sciences - PNAS (03.07.2001)
Published in Proceedings of the National Academy of Sciences - PNAS (03.07.2001)
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Journal Article
Chytridiomycosis Causes Amphibian Mortality Associated with Population Declines in the Rain Forests of Australia and Central America
Berger, Lee, Speare, Rick, Daszak, Peter, Green, D. Earl, Cunningham, Andrew A., Goggin, C. Louise, Slocombe, Ron, Ragan, Mark A., Hyati, Alex D., McDonald, Keith R., Hines, Harry B., Lips, Karen R., Marantelli, Gerry, Parkes, Helen
Published in Proceedings of the National Academy of Sciences - PNAS (21.07.1998)
Published in Proceedings of the National Academy of Sciences - PNAS (21.07.1998)
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Journal Article
Protein contact prediction using patterns of correlation
Hamilton, Nicholas, Burrage, Kevin, Ragan, Mark A., Huber, Thomas
Published in Proteins, structure, function, and bioinformatics (01.09.2004)
Published in Proteins, structure, function, and bioinformatics (01.09.2004)
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Journal Article
Molecular Epidemiology of Clinical Cryptococcus neoformans Strains from India
Jain, N, Wickes, B. L, Keller, S. M, Fu, J, Casadevall, A, Jain, P, Ragan, M. A, Banerjee, U, Fries, B. C
Published in Journal of Clinical Microbiology (01.11.2005)
Published in Journal of Clinical Microbiology (01.11.2005)
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Journal Article
Inferring Genome Trees by Using a Filter To Eliminate Phylogenetically Discordant Sequences and a Distance Matrix Based on Mean Normalized BLASTP Scores
Clarke, G D Paul, Beiko, Robert G, Ragan, Mark A, Charlebois, Robert L
Published in Journal of Bacteriology (01.04.2002)
Published in Journal of Bacteriology (01.04.2002)
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Journal Article
Workflows in bioinformatics: meta-analysis and prototype implementation of a workflow generator
Garcia Castro, Alexander, Thoraval, Samuel, Garcia, Leyla J, Ragan, Mark A
Published in BMC bioinformatics (07.04.2005)
Published in BMC bioinformatics (07.04.2005)
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Journal Article
A Novel Clade of Protistan Parasites near the Animal-Fungal Divergence
Ragan, Mark A., Goggin, C. Louise, Cawthorn, Richard J., Cerenius, Lage, Angela V. C. Jamieson, Plourde, Susan M., Rand, Thomas G., Söderhäll, Kenneth, Gutell, Robin R.
Published in Proceedings of the National Academy of Sciences - PNAS (15.10.1996)
Published in Proceedings of the National Academy of Sciences - PNAS (15.10.1996)
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Journal Article
Sampling phylogenetic tree space with the generalized Gibbs sampler
Keith, Jonathan M., Adams, Peter, Ragan, Mark A., Bryant, Darryn
Published in Molecular phylogenetics and evolution (01.03.2005)
Published in Molecular phylogenetics and evolution (01.03.2005)
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