Cycles of satellite and transposon evolution in Arabidopsis centromeres
Wlodzimierz, Piotr, Rabanal, Fernando A, Burns, Robin, Naish, Matthew, Primetis, Elias, Scott, Alison, Mandáková, Terezie, Gorringe, Nicola, Tock, Andrew J, Holland, Daniel, Fritschi, Katrin, Habring, Anette, Lanz, Christa, Patel, Christie, Schlegel, Theresa, Collenberg, Maximilian, Mielke, Miriam, Nordborg, Magnus, Roux, Fabrice, Shirsekar, Gautam, Alonso-Blanco, Carlos, Lysak, Martin A, Novikova, Polina Y, Bousios, Alexandros, Weigel, Detlef, Henderson, Ian R
Published in Nature (London) (15.06.2023)
Published in Nature (London) (15.06.2023)
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Journal Article
Extensive sequence duplication in Arabidopsis revealed by pseudo-heterozygosity
Jaegle, Benjamin, Pisupati, Rahul, Soto-Jiménez, Luz Mayela, Burns, Robin, Rabanal, Fernando A, Nordborg, Magnus
Published in Genome Biology (09.03.2023)
Published in Genome Biology (09.03.2023)
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Journal Article
Pushing the limits of HiFi assemblies reveals centromere diversity between two Arabidopsis thaliana genomes
Rabanal, Fernando A, Gräff, Maike, Lanz, Christa, Fritschi, Katrin, Llaca, Victor, Lang, Michelle, Carbonell-Bejerano, Pablo, Henderson, Ian, Weigel, Detlef
Published in Nucleic acids research (28.11.2022)
Published in Nucleic acids research (28.11.2022)
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Journal Article
Massive genomic variation and strong selection in Arabidopsis thaliana lines from Sweden
Long, Quan, Rabanal, Fernando A, Meng, Dazhe, Huber, Christian D, Farlow, Ashley, Platzer, Alexander, Zhang, Qingrun, Vilhjálmsson, Bjarni J, Korte, Arthur, Nizhynska, Viktoria, Voronin, Viktor, Korte, Pamela, Sedman, Laura, Mandáková, Terezie, Lysak, Martin A, Seren, Ümit, Hellmann, Ines, Nordborg, Magnus
Published in Nature genetics (01.08.2013)
Published in Nature genetics (01.08.2013)
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Journal Article
Atlas of telomeric repeat diversity in Arabidopsis thaliana
Tao, Yueqi, Xian, Wenfei, Bao, Zhigui, Rabanal, Fernando A., Movilli, Andrea, Lanz, Christa, Shirsekar, Gautam, Weigel, Detlef
Published in Genome Biology (16.09.2024)
Published in Genome Biology (16.09.2024)
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Journal Article
1,135 Genomes Reveal the Global Pattern of Polymorphism in Arabidopsis thaliana
Alonso-Blanco, Carlos, Andrade, Jorge, Becker, Claude, Bemm, Felix, Bergelson, Joy, Borgwardt, Karsten M., Cao, Jun, Chae, Eunyoung, Dezwaan, Todd M., Ding, Wei, Ecker, Joseph R., Exposito-Alonso, Moises, Farlow, Ashley, Fitz, Joffrey, Gan, Xiangchao, Grimm, Dominik G., Hancock, Angela M., Henz, Stefan R., Holm, Svante, Horton, Matthew, Jarsulic, Mike, Kerstetter, Randall A., Korte, Arthur, Korte, Pamela, Lanz, Christa, Lee, Cheng-Ruei, Meng, Dazhe, Michael, Todd P., Mott, Richard, Muliyati, Ni Wayan, Nägele, Thomas, Nagler, Matthias, Nizhynska, Viktoria, Nordborg, Magnus, Novikova, Polina Yu, Picó, F. Xavier, Platzer, Alexander, Rabanal, Fernando A., Rodriguez, Alex, Rowan, Beth A., Salomé, Patrice A., Schmid, Karl J., Schmitz, Robert J., Seren, Ümit, Sperone, Felice Gianluca, Sudkamp, Mitchell, Svardal, Hannes, Tanzer, Matt M., Todd, Donald, Volchenboum, Samuel L., Wang, Congmao, Wang, George, Wang, Xi, Weckwerth, Wolfram, Weigel, Detlef, Zhou, Xuefeng
Published in Cell (14.07.2016)
Published in Cell (14.07.2016)
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Journal Article
Epigenomic Diversity in a Global Collection of Arabidopsis thaliana Accessions
Kawakatsu, Taiji, Huang, Shao-shan Carol, Jupe, Florian, Sasaki, Eriko, Schmitz, Robert J., Urich, Mark A., Castanon, Rosa, Nery, Joseph R., Barragan, Cesar, He, Yupeng, Chen, Huaming, Dubin, Manu, Lee, Cheng-Ruei, Wang, Congmao, Bemm, Felix, Becker, Claude, O’Neil, Ryan, O’Malley, Ronan C., Quarless, Danjuma X., Alonso-Blanco, Carlos, Andrade, Jorge, Becker, Claude, Bemm, Felix, Bergelson, Joy, Borgwardt, Karsten, Chae, Eunyoung, Dezwaan, Todd, Ding, Wei, Ecker, Joseph R., Expósito-Alonso, Moisés, Farlow, Ashley, Fitz, Joffrey, Gan, Xiangchao, Grimm, Dominik G., Hancock, Angela, Henz, Stefan R., Holm, Svante, Horton, Matthew, Jarsulic, Mike, Kerstetter, Randall A., Korte, Arthur, Korte, Pamela, Lanz, Christa, Lee, Chen-Ruei, Meng, Dazhe, Michael, Todd P., Mott, Richard, Muliyati, Ni Wayan, Nägele, Thomas, Nagler, Matthias, Nizhynska, Viktoria, Nordborg, Magnus, Novikova, Polina, Picó, F. Xavier, Platzer, Alexander, Rabanal, Fernando A., Rodriguez, Alex, Rowan, Beth A., Salomé, Patrice A., Schmid, Karl, Schmitz, Robert J., Seren, Ümit, Sperone, Felice Gianluca, Sudkamp, Mitchell, Svardal, Hannes, Tanzer, Matt M., Todd, Donald, Volchenboum, Samuel L., Wang, Congmao, Wang, George, Wang, Xi, Weckwerth, Wolfram, Weigel, Detlef, Zhou, Xuefeng, Schork, Nicholas J., Weigel, Detlef, Nordborg, Magnus, Ecker, Joseph R.
Published in Cell (14.07.2016)
Published in Cell (14.07.2016)
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Journal Article
A Truncated Singleton NLR Causes Hybrid Necrosis in Arabidopsis thaliana
Barragan, Ana Cristina, Collenberg, Maximilian, Wang, Jinge, Lee, Rachelle R Q, Cher, Wei Yuan, Rabanal, Fernando A, Ashkenazy, Haim, Weigel, Detlef, Chae, Eunyoung
Published in Molecular biology and evolution (01.02.2021)
Published in Molecular biology and evolution (01.02.2021)
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Journal Article
Standing genetic variation fuels rapid evolution of herbicide resistance in blackgrass
Kersten, Sonja, Chang, Jiyang, Huber, Christian D, Voichek, Yoav, Lanz, Christa, Hagmaier, Timo, Lang, Patricia, Lutz, Ulrich, Hirschberg, Insa, Lerchl, Jens, Porri, Aimone, Van de Peer, Yves, Schmid, Karl, Weigel, Detlef, Rabanal, Fernando A
Published in Proceedings of the National Academy of Sciences - PNAS (18.04.2023)
Published in Proceedings of the National Academy of Sciences - PNAS (18.04.2023)
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Journal Article
Structural variation and DNA methylation shape the centromere-proximal meiotic crossover landscape in Arabidopsis
Fernandes, Joiselle B, Naish, Matthew, Lian, Qichao, Burns, Robin, Tock, Andrew J, Rabanal, Fernando A, Wlodzimierz, Piotr, Habring, Anette, Nicholas, Robert E, Weigel, Detlef, Mercier, Raphael, Henderson, Ian R
Published in Genome Biology (22.01.2024)
Published in Genome Biology (22.01.2024)
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Journal Article
Deep haplotype analyses of target‐site resistance locus ACCase in blackgrass enabled by pool‐based amplicon sequencing
Kersten, Sonja, Rabanal, Fernando A., Herrmann, Johannes, Hess, Martin, Kronenberg, Zev N., Schmid, Karl, Weigel, Detlef
Published in Plant biotechnology journal (01.06.2023)
Published in Plant biotechnology journal (01.06.2023)
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Journal Article
Genetic and epigenetic variation in 5S ribosomal RNA genes reveals genome dynamics in Arabidopsis thaliana
Simon, Lauriane, Rabanal, Fernando A, Dubos, Tristan, Oliver, Cecilia, Lauber, Damien, Poulet, Axel, Vogt, Alexander, Mandlbauer, Ariane, Le Goff, Samuel, Sommer, Andreas, Duborjal, Hervé, Tatout, Christophe, Probst, Aline V
Published in Nucleic acids research (06.04.2018)
Published in Nucleic acids research (06.04.2018)
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Journal Article
It Is Just a Matter of Time: Balancing Homologous Recombination and Non-homologous End Joining at the rDNA Locus During Meiosis
Sims, Jason, Rabanal, Fernando A., Elgert, Christiane, von Haeseler, Arndt, Schlögelhofer, Peter
Published in Frontiers in plant science (28.10.2021)
Published in Frontiers in plant science (28.10.2021)
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Journal Article
Epistatic and allelic interactions control expression of ribosomal RNA gene clusters in Arabidopsis thaliana
Rabanal, Fernando A, Mandáková, Terezie, Soto-Jiménez, Luz M, Greenhalgh, Robert, Parrott, David L, Lutzmayer, Stefan, Steffen, Joshua G, Nizhynska, Viktoria, Mott, Richard, Lysak, Martin A, Clark, Richard M, Nordborg, Magnus
Published in Genome Biology (03.05.2017)
Published in Genome Biology (03.05.2017)
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Journal Article
Leveraging orthology within maize and Arabidopsis QTL to identify genes affecting natural variation in gravitropism
Yoshihara, Takeshi, Miller, Nathan D., Rabanal, Fernando A., Myles, Hannah, Kwak, Il-Youp, Broman, Karl W., Sadkhin, Boris, Baxter, Ivan, Dilkes, Brian P., Hudson, Matthew E., Spalding, Edgar P.
Published in Proceedings of the National Academy of Sciences - PNAS (04.10.2022)
Published in Proceedings of the National Academy of Sciences - PNAS (04.10.2022)
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Journal Article
Phytohormone sensing in the biotrophic fungus Ustilago maydis – the dual role of the transcription factor Rss1
Rabe, Franziska, Seitner, Denise, Bauer, Lisa, Navarrete, Fernando, Czedik‐Eysenberg, Angelika, Rabanal, Fernando A., Djamei, Armin
Published in Molecular microbiology (01.10.2016)
Published in Molecular microbiology (01.10.2016)
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Journal Article
RNA-mediated trans-communication can establish paramutation at the b1 locus in maize
Arteaga-Vazquez, Mario, Sidorenko, Lyudmila, Rabanal, Fernando A., Shrivistava, Roli, Nobuta, Kan, Green, Pamela J., Meyers, Blake C., Chandler, Vicki L.
Published in Proceedings of the National Academy of Sciences - PNAS (20.07.2010)
Published in Proceedings of the National Academy of Sciences - PNAS (20.07.2010)
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