p53 inhibits CRISPR–Cas9 engineering in human pluripotent stem cells
Ihry, Robert J., Worringer, Kathleen A., Salick, Max R., Frias, Elizabeth, Ho, Daniel, Theriault, Kraig, Kommineni, Sravya, Chen, Julie, Sondey, Marie, Ye, Chaoyang, Randhawa, Ranjit, Kulkarni, Tripti, Yang, Zinger, McAllister, Gregory, Russ, Carsten, Reece-Hoyes, John, Forrester, William, Hoffman, Gregory R., Dolmetsch, Ricardo, Kaykas, Ajamete
Published in Nature medicine (01.07.2018)
Published in Nature medicine (01.07.2018)
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Journal Article
DNA Repair Profiling Reveals Nonrandom Outcomes at Cas9-Mediated Breaks
van Overbeek, Megan, Capurso, Daniel, Carter, Matthew M., Thompson, Matthew S., Frias, Elizabeth, Russ, Carsten, Reece-Hoyes, John S., Nye, Christopher, Gradia, Scott, Vidal, Bastien, Zheng, Jiashun, Hoffman, Gregory R., Fuller, Christopher K., May, Andrew P.
Published in Molecular cell (18.08.2016)
Published in Molecular cell (18.08.2016)
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Journal Article
USP7 inhibits Wnt/β-catenin signaling through promoting stabilization of Axin
Ji, Lei, Lu, Bo, Zamponi, Raffaella, Charlat, Olga, Aversa, Robert, Yang, Zinger, Sigoillot, Frederic, Zhu, Xiaoping, Hu, Tiancen, Reece-Hoyes, John S., Russ, Carsten, Michaud, Gregory, Tchorz, Jan S., Jiang, Xiaomo, Cong, Feng
Published in Nature communications (13.09.2019)
Published in Nature communications (13.09.2019)
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Journal Article
De novo somatic mutations in components of the PI3K-AKT3-mTOR pathway cause hemimegalencephaly
Lee, Jeong Ho, Huynh, My, Silhavy, Jennifer L, Kim, Sangwoo, Dixon-Salazar, Tracy, Heiberg, Andrew, Scott, Eric, Bafna, Vineet, Hill, Kiley J, Collazo, Adrienne, Funari, Vincent, Russ, Carsten, Gabriel, Stacey B, Mathern, Gary W, Gleeson, Joseph G
Published in Nature genetics (01.08.2012)
Published in Nature genetics (01.08.2012)
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Journal Article
Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
Chiang, H Rosaria, Schoenfeld, Lori W, Ruby, J Graham, Auyeung, Vincent C, Spies, Noah, Baek, Daehyun, Johnston, Wendy K, Russ, Carsten, Luo, Shujun, Babiarz, Joshua E, Blelloch, Robert, Schroth, Gary P, Nusbaum, Chad, Bartel, David P
Published in Genes & development (15.05.2010)
Published in Genes & development (15.05.2010)
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Journal Article
Pacific biosciences sequencing technology for genotyping and variation discovery in human data
Carneiro, Mauricio O, Russ, Carsten, Ross, Michael G, Gabriel, Stacey B, Nusbaum, Chad, DePristo, Mark A
Published in BMC genomics (05.08.2012)
Published in BMC genomics (05.08.2012)
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Journal Article
Characterizing and measuring bias in sequence data
Ross, Michael G, Russ, Carsten, Costello, Maura, Hollinger, Andrew, Lennon, Niall J, Hegarty, Ryan, Nusbaum, Chad, Jaffe, David B
Published in Genome biology (29.05.2013)
Published in Genome biology (29.05.2013)
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Journal Article
A Genome-wide CRISPR Screen Identifies ZCCHC14 as a Host Factor Required for Hepatitis B Surface Antigen Production
Hyrina, Anastasia, Jones, Christopher, Chen, Darlene, Clarkson, Scott, Cochran, Nadire, Feucht, Paul, Hoffman, Gregory, Lindeman, Alicia, Russ, Carsten, Sigoillot, Frederic, Tsang, Tiffany, Uehara, Kyoko, Xie, Lili, Ganem, Don, Holdorf, Meghan
Published in Cell reports (Cambridge) (03.12.2019)
Published in Cell reports (Cambridge) (03.12.2019)
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Genome-wide CRISPR screen for PARKIN regulators reveals transcriptional repression as a determinant of mitophagy
Potting, Christoph, Crochemore, Christophe, Moretti, Francesca, Nigsch, Florian, Schmidt, Isabel, Manneville, Carole, Carbone, Walter, Knehr, Judith, DeJesus, Rowena, Lindeman, Alicia, Maher, Rob, Russ, Carsten, McAllister, Gregory, Reece-Hoyes, John S., Hoffman, Gregory R., Roma, Guglielmo, Müller, Matthias, Sailer, Andreas W., Helliwell, Stephen B.
Published in Proceedings of the National Academy of Sciences - PNAS (09.01.2018)
Published in Proceedings of the National Academy of Sciences - PNAS (09.01.2018)
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Genome-wide maps of chromatin state in pluripotent and lineage-committed cells
Presser, Aviva, Kim, Tae-Kyung, Issac, Biju, O'Donovan, Aisling, Giannoukos, Georgia, Lander, Eric S, Jaffe, David B, Jaenisch, Rudolf, Xie, Xiaohui, Alvarez, Pablo, Russ, Carsten, Wernig, Marius, Lee, William, Meissner, Alexander, Mikkelsen, Tarjei S, Nusbaum, Chad, Mendenhall, Eric, Ku, Manching, Lieberman, Erez, Brockman, William, Bernstein, Bradley E, Koche, Richard P
Published in Nature (02.08.2007)
Published in Nature (02.08.2007)
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Premetazoan genome evolution and the regulation of cell differentiation in the choanoflagellate Salpingoeca rosetta
Fairclough, Stephen R, Chen, Zehua, Kramer, Eric, Zeng, Qiandong, Young, Sarah, Robertson, Hugh M, Begovic, Emina, Richter, Daniel J, Russ, Carsten, Westbrook, M Jody, Manning, Gerard, Lang, B Franz, Haas, Brian, Nusbaum, Chad, King, Nicole
Published in Genome biology (18.02.2013)
Published in Genome biology (18.02.2013)
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Journal Article
Finished bacterial genomes from shotgun sequence data
Ribeiro, Filipe J, Przybylski, Dariusz, Yin, Shuangye, Sharpe, Ted, Gnerre, Sante, Abouelleil, Amr, Berlin, Aaron M, Montmayeur, Anna, Shea, Terrance P, Walker, Bruce J, Young, Sarah K, Russ, Carsten, Nusbaum, Chad, MacCallum, Iain, Jaffe, David B
Published in Genome research (01.11.2012)
Published in Genome research (01.11.2012)
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Journal Article
Massively parallel sequencing of human urinary exosome/microvesicle RNA reveals a predominance of non-coding RNA
Miranda, Kevin C, Bond, Daniel T, Levin, Joshua Z, Adiconis, Xian, Sivachenko, Andrey, Russ, Carsten, Brown, Dennis, Nusbaum, Chad, Russo, Leileata M
Published in PloS one (09.05.2014)
Published in PloS one (09.05.2014)
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Journal Article
Regulated aggregative multicellularity in a close unicellular relative of metazoa
Sebé-Pedrós, Arnau, Irimia, Manuel, Del Campo, Javier, Parra-Acero, Helena, Russ, Carsten, Nusbaum, Chad, Blencowe, Benjamin J, Ruiz-Trillo, Iñaki
Published in eLife (24.12.2013)
Published in eLife (24.12.2013)
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Genomics of Loa loa, a Wolbachia-free filarial parasite of humans
Desjardins, Christopher A, Cerqueira, Gustavo C, Goldberg, Jonathan M, Hotopp, Julie C Dunning, Haas, Brian J, Zucker, Jeremy, Ribeiro, José M C, Saif, Sakina, Levin, Joshua Z, Fan, Lin, Zeng, Qiandong, Russ, Carsten, Wortman, Jennifer R, Fink, Doran L, Birren, Bruce W, Nutman, Thomas B
Published in Nature genetics (01.05.2013)
Published in Nature genetics (01.05.2013)
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Journal Article
Cancer lineage-specific regulation of YAP responsive elements revealed through large-scale functional epigenomic screens
Barbosa, Inês A. M., Gopalakrishnan, Rajaraman, Mercan, Samuele, Mourikis, Thanos P., Martin, Typhaine, Wengert, Simon, Sheng, Caibin, Ji, Fei, Lopes, Rui, Knehr, Judith, Altorfer, Marc, Lindeman, Alicia, Russ, Carsten, Naumann, Ulrike, Golji, Javad, Sprouffske, Kathleen, Barys, Louise, Tordella, Luca, Schübeler, Dirk, Schmelzle, Tobias, Galli, Giorgio G.
Published in Nature communications (03.07.2023)
Published in Nature communications (03.07.2023)
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Journal Article
Cell adhesion molecule KIRREL1 is a feedback regulator of Hippo signaling recruiting SAV1 to cell-cell contact sites
Paul, Atanu, Annunziato, Stefano, Lu, Bo, Sun, Tianliang, Evrova, Olivera, Planas-Paz, Lara, Orsini, Vanessa, Terracciano, Luigi M., Charlat, Olga, Loureiro, Zinger Yang, Ji, Lei, Zamponi, Raffaella, Sigoillot, Frederic, Lei, Hong, Lindeman, Alicia, Russ, Carsten, Reece-Hoyes, John S., Nicholson, Thomas B., Tchorz, Jan S., Cong, Feng
Published in Nature communications (17.02.2022)
Published in Nature communications (17.02.2022)
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The Natural Product Cavinafungin Selectively Interferes with Zika and Dengue Virus Replication by Inhibition of the Host Signal Peptidase
Estoppey, David, Lee, Chia Min, Janoschke, Marco, Lee, Boon Heng, Wan, Kah Fei, Dong, Hongping, Mathys, Philippe, Filipuzzi, Ireos, Schuhmann, Tim, Riedl, Ralph, Aust, Thomas, Galuba, Olaf, McAllister, Gregory, Russ, Carsten, Spiess, Martin, Bouwmeester, Tewis, Bonamy, Ghislain M.C., Hoepfner, Dominic
Published in Cell reports (Cambridge) (18.04.2017)
Published in Cell reports (Cambridge) (18.04.2017)
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Journal Article
Genome-Scale CRISPR Screens Identify Human Pluripotency-Specific Genes
Ihry, Robert J., Salick, Max R., Ho, Daniel J., Sondey, Marie, Kommineni, Sravya, Paula, Steven, Raymond, Joe, Henry, Beata, Frias, Elizabeth, Wang, Qiong, Worringer, Kathleen A., Ye, Chaoyang, Russ, Carsten, Reece-Hoyes, John S., Altshuler, Robert C., Randhawa, Ranjit, Yang, Zinger, McAllister, Gregory, Hoffman, Gregory R., Dolmetsch, Ricardo, Kaykas, Ajamete
Published in Cell reports (Cambridge) (09.04.2019)
Published in Cell reports (Cambridge) (09.04.2019)
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Journal Article
Functional CRISPR screening identifies the ufmylation pathway as a regulator of SQSTM1/p62
DeJesus, Rowena, Moretti, Francesca, McAllister, Gregory, Wang, Zuncai, Bergman, Phil, Liu, Shanming, Frias, Elizabeth, Alford, John, Reece-Hoyes, John S, Lindeman, Alicia, Kelliher, Jennifer, Russ, Carsten, Knehr, Judith, Carbone, Walter, Beibel, Martin, Roma, Guglielmo, Ng, Aylwin, Tallarico, John A, Porter, Jeffery A, Xavier, Ramnik J, Mickanin, Craig, Murphy, Leon O, Hoffman, Gregory R, Nyfeler, Beat
Published in eLife (28.06.2016)
Published in eLife (28.06.2016)
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