A Year of Infection in the Intensive Care Unit: Prospective Whole Genome Sequencing of Bacterial Clinical Isolates Reveals Cryptic Transmissions and Novel Microbiota
Roach, David J, Burton, Joshua N, Lee, Choli, Stackhouse, Bethany, Butler-Wu, Susan M, Cookson, Brad T, Shendure, Jay, Salipante, Stephen J
Published in PLoS genetics (01.07.2015)
Published in PLoS genetics (01.07.2015)
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Journal Article
Large-scale genomic sequencing of extraintestinal pathogenic Escherichia coli strains
Salipante, Stephen J, Roach, David J, Kitzman, Jacob O, Snyder, Matthew W, Stackhouse, Bethany, Butler-Wu, Susan M, Lee, Choli, Cookson, Brad T, Shendure, Jay
Published in Genome research (01.01.2015)
Published in Genome research (01.01.2015)
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Journal Article
Ultrashort Echo-Time Magnetic Resonance Imaging Is a Sensitive Method for the Evaluation of Early Cystic Fibrosis Lung Disease
Roach, David J, Crémillieux, Yannick, Fleck, Robert J, Brody, Alan S, Serai, Suraj D, Szczesniak, Rhonda D, Kerlakian, Stephanie, Clancy, John P, Woods, Jason C
Published in Annals of the American Thoracic Society (01.11.2016)
Published in Annals of the American Thoracic Society (01.11.2016)
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Journal Article
Correction: A Year of Infection in the Intensive Care Unit: Prospective Whole Genome Sequencing of Bacterial Clinical Isolates Reveals Cryptic Transmissions and Novel Microbiota
Roach, David J, Burton, Joshua N, Lee, Choli, Stackhouse, Bethany, Butler-Wu, Susan M, Cookson, Brad T, Shendure, Jay, Salipante, Stephen J
Published in PLoS genetics (01.04.2017)
Published in PLoS genetics (01.04.2017)
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Journal Article
Primate evolution of the recombination regulator PRDM9
Schwartz, Jerrod J., Roach, David J., Thomas, James H., Shendure, Jay
Published in Nature communications (08.07.2014)
Published in Nature communications (08.07.2014)
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Journal Article
129 Xe Image Processing Pipeline: An open-source, graphical user interface application for the analysis of hyperpolarized 129 Xe MRI
Bdaiwi, Abdullah S, Willmering, Matthew M, Plummer, Joseph W, Hussain, Riaz, Roach, David J, Parra-Robles, Juan, Niedbalski, Peter J, Woods, Jason C, Walkup, Laura L, Cleveland, Zackary I
Published in Magnetic resonance in medicine (31.10.2024)
Published in Magnetic resonance in medicine (31.10.2024)
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Journal Article
Same-Day Repeatability and 28-Day Reproducibility of Xenon MRI Ventilation in Children With Cystic Fibrosis in a Multi-Site Trial
Walkup, Laura L, Roach, David J, Plummer, Joseph W, Willmering, Matthew M, Zanette, Brandon, Santyr, Giles, Fain, Sean B, Rock, Michael J, Mata, Jaime, Froh, Deborah, Stanojevic, Sanja, Cleveland, Zackary I, Ratjen, Felix, Woods, Jason C
Published in Journal of magnetic resonance imaging (11.09.2024)
Published in Journal of magnetic resonance imaging (11.09.2024)
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Journal Article
Clinical and Genomic Characterization of a Cohort of Patients With Klebsiella pneumoniae Bloodstream Infection
Roach, David J, Sridhar, Sushmita, Oliver, Elizabeth, Rao, Sowmya R, Slater, Damien M, Hwang, Wontae, Hutt Vater, Kian, Dinesh, Anupama, Qadri, Firdausi, Chisti, Mohammod J, Pierce, Virginia M, Turbett, Sarah E, Bhattacharyya, Roby P, Worby, Colin J, Earl, Ashlee M, LaRocque, Regina C, Harris, Jason B
Published in Clinical infectious diseases (25.01.2024)
Published in Clinical infectious diseases (25.01.2024)
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Journal Article
Regional Structure-Function in Cystic Fibrosis Lung Disease Using Hyperpolarized 129Xe and Ultrashort Echo Magnetic Resonance Imaging
Thomen, Robert P, Walkup, Laura L, Roach, David J, Higano, Nara, Schapiro, Andrew, Brody, Alan, Clancy, John P, Cleveland, Zackary I, Woods, Jason C
Published in American journal of respiratory and critical care medicine (15.07.2020)
Published in American journal of respiratory and critical care medicine (15.07.2020)
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Journal Article
Automated Parallel DNA Sequencing on Multiple Channel Microchips
Liu, Shaorong, Ren, Hongji, Gao, Qiufeng, Roach, David J., Loder, Robert T., Armstrong, Thomas M., Mao, Qinglu, Blaga, Iuliu, Barker, David L., Jovanovich, Stevan B.
Published in Proceedings of the National Academy of Sciences - PNAS (09.05.2000)
Published in Proceedings of the National Academy of Sciences - PNAS (09.05.2000)
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Journal Article
Assessment of pulmonary structure–function relationships in young children and adolescents with cystic fibrosis by multivolume proton‐MRI and CT
Pennati, Francesca, Roach, David J., Clancy, John P., Brody, Alan S., Fleck, Robert J., Aliverti, Andrea, Woods, Jason C.
Published in Journal of magnetic resonance imaging (01.08.2018)
Published in Journal of magnetic resonance imaging (01.08.2018)
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Journal Article
Sensitive structural and functional measurements and 1-year pulmonary outcomes in pediatric cystic fibrosis
Willmering, Matthew M., Roach, David J., Kramer, Elizabeth L., Walkup, Laura L., Cleveland, Zackary I., Woods, Jason C.
Published in Journal of cystic fibrosis (01.05.2021)
Published in Journal of cystic fibrosis (01.05.2021)
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Journal Article
Morphological and quantitative evaluation of emphysema in chronic obstructive pulmonary disease patients: A comparative study of MRI with CT
Roach, David J., Crémillieux, Yannick, Serai, Suraj D., Thomen, Robert P., Wang, Hui, Zou, Yuanshu, Szczesniak, Rhonda D., Benzaquen, Sadia, Woods, Jason C.
Published in Journal of magnetic resonance imaging (01.12.2016)
Published in Journal of magnetic resonance imaging (01.12.2016)
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Journal Article
Cyst Ventilation Heterogeneity and Alveolar Airspace Dilation as Early Disease Markers in Lymphangioleiomyomatosis
Walkup, Laura L, Roach, David J, Hall, Chase S, Gupta, Nishant, Thomen, Robert P, Cleveland, Zackary I, McCormack, Francis X, Woods, Jason C
Published in Annals of the American Thoracic Society (01.08.2019)
Published in Annals of the American Thoracic Society (01.08.2019)
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Journal Article
Short-term structural and functional changes after airway clearance therapy in cystic fibrosis
West, Michael E, Spielberg, David R, Roach, David J, Willmering, Matthew M, Bdaiwi, Abdullah S, Cleveland, Zackary I, Woods, Jason C
Published in Journal of cystic fibrosis (01.09.2023)
Published in Journal of cystic fibrosis (01.09.2023)
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Journal Article
129Xe MRI as a measure of clinical disease severity for pediatric asthma
Lin, Nancy Y., Roach, David J., Willmering, Matthew M., Walkup, Laura L., Hossain, Md Monir, Desirazu, Priyanka, Cleveland, Zackary I., Guilbert, Theresa W., Woods, Jason C.
Published in Journal of allergy and clinical immunology (01.06.2021)
Published in Journal of allergy and clinical immunology (01.06.2021)
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Journal Article
Improved donor lung size matching by estimation of lung volumes based on chest X‐ray measurements
Roach, David J., Szugye, Nick A., Moore, Ryan A., Hossain, Md Monir, Morales, David L. S., Hayes, Don, Towe, Christopher T., Zafar, Farhan, Woods, Jason C.
Published in Pediatric transplantation (01.12.2023)
Published in Pediatric transplantation (01.12.2023)
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Journal Article
Structural lung abnormalities on computed tomography correlate with asthma inflammation in bronchoscopic alveolar lavage fluid
Roach, David J, Ruangnapa, Kanokpan, Fleck, Robert J, Rattan, Mantosh S, Zhang, Yin, Hossain, Md Monir, Guilbert, Theresa W, Woods, Jason C
Published in The Journal of asthma (01.09.2020)
Published in The Journal of asthma (01.09.2020)
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Journal Article
Regional Structure-Function in Cystic Fibrosis Lung Disease Using Hyperpolarized 129 Xe and Ultrashort Echo Magnetic Resonance Imaging
Thomen, Robert P, Walkup, Laura L, Roach, David J, Higano, Nara, Schapiro, Andrew, Brody, Alan, Clancy, John P, Cleveland, Zackary I, Woods, Jason C
Published in American journal of respiratory and critical care medicine (15.07.2020)
Published in American journal of respiratory and critical care medicine (15.07.2020)
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Journal Article