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Rahmani, Elior, Schweiger, Regev, Rhead, Brooke, Criswell, Lindsey A., Barcellos, Lisa F., Eskin, Eleazar, Rosset, Saharon, Sankararaman, Sriram, Halperin, Eran
Published in Nature communications (31.07.2019)
Published in Nature communications (31.07.2019)
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A phenotypic and genomics approach in a multi-ethnic cohort to subtype systemic lupus erythematosus
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Published in Nature communications (29.08.2019)
Published in Nature communications (29.08.2019)
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The UCSC Genome Browser database: extensions and updates 2013
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Published in Nucleic acids research (01.01.2013)
Published in Nucleic acids research (01.01.2013)
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Proximal and distal effects of genetic susceptibility to multiple sclerosis on the T cell epigenome
Roostaei, Tina, Klein, Hans-Ulrich, Ma, Yiyi, Felsky, Daniel, Kivisäkk, Pia, Connor, Sarah M., Kroshilina, Alexandra, Yung, Christina, Kaskow, Belinda J., Shao, Xiaorong, Rhead, Brooke, Ordovás, José M., Absher, Devin M., Arnett, Donna K., Liu, Jia, Patsopoulos, Nikolaos, Barcellos, Lisa F., Weiner, Howard L., De Jager, Philip L.
Published in Nature communications (06.12.2021)
Published in Nature communications (06.12.2021)
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Global expression and CpG methylation analysis of primary endothelial cells before and after TNFa stimulation reveals gene modules enriched in inflammatory and infectious diseases and associated DMRs
Rhead, Brooke, Shao, Xiaorong, Quach, Hong, Ghai, Poonam, Barcellos, Lisa F, Bowcock, Anne M
Published in PloS one (31.03.2020)
Published in PloS one (31.03.2020)
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Admixture mapping reveals evidence of differential multiple sclerosis risk by genetic ancestry
Chi, Calvin, Shao, Xiaorong, Rhead, Brooke, Gonzales, Edlin, Smith, Jessica B, Xiang, Anny H, Graves, Jennifer, Waldman, Amy, Lotze, Timothy, Schreiner, Teri, Weinstock-Guttman, Bianca, Aaen, Gregory, Tillema, Jan-Mendelt, Ness, Jayne, Candee, Meghan, Krupp, Lauren, Gorman, Mark, Benson, Leslie, Chitnis, Tanuja, Mar, Soe, Belman, Anita, Casper, Theron Charles, Rose, John, Moodley, Manikum, Rensel, Mary, Rodriguez, Moses, Greenberg, Benjamin, Kahn, Llana, Rubin, Jennifer, Schaefer, Catherine, Waubant, Emmanuelle, Langer-Gould, Annette, Barcellos, Lisa F
Published in PLoS genetics (17.01.2019)
Published in PLoS genetics (17.01.2019)
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Author Correction: A phenotypic and genomics approach in a multi-ethnic cohort to subtype systemic lupus erythematosus
Lanata, Cristina M., Paranjpe, Ishan, Nititham, Joanne, Taylor, Kimberly E., Gianfrancesco, Milena, Paranjpe, Manish, Andrews, Shan, Chung, Sharon A., Rhead, Brooke, Barcellos, Lisa F., Trupin, Laura, Katz, Patricia, Dall’Era, Maria, Yazdany, Jinoos, Sirota, Marina, Criswell, Lindsey A.
Published in Nature communications (27.02.2020)
Published in Nature communications (27.02.2020)
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Association of genetic ancestry with molecular tumor profiles in colorectal cancer
Rhead, Brooke, Hein, David M, Pouliot, Yannick, Guinney, Justin, De La Vega, Francisco M, Sanford, Nina N
Published in Genome medicine (13.08.2024)
Published in Genome medicine (13.08.2024)
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Molecular profiling of a real-world breast cancer cohort with genetically inferred ancestries reveals actionable tumor biology differences between European ancestry and African ancestry patient populations
Miyashita, Minoru, Bell, Joshua S K, Wenric, Stephane, Karaesmen, Ezgi, Rhead, Brooke, Kase, Matthew, Kaneva, Kristiyana, De La Vega, Francisco M, Zheng, Yonglan, Yoshimatsu, Toshio F, Khramtsova, Galina, Liu, Fang, Zhao, Fangyuan, Howard, Frederick M, Nanda, Rita, Beaubier, Nike, White, Kevin P, Huo, Dezheng, Olopade, Olufunmilayo I
Published in Breast cancer research : BCR (25.05.2023)
Published in Breast cancer research : BCR (25.05.2023)
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Increased DNA methylation of SLFN12 in CD4+ and CD8+ T cells from multiple sclerosis patients
Rhead, Brooke, Brorson, Ina S, Berge, Tone, Adams, Cameron, Quach, Hong, Moen, Stine Marit, Berg-Hansen, Pål, Celius, Elisabeth Gulowsen, Sangurdekar, Dipen P, Bronson, Paola G, Lea, Rodney A, Burnard, Sean, Maltby, Vicki E, Scott, Rodney J, Lechner-Scott, Jeannette, Harbo, Hanne F, Bos, Steffan D, Barcellos, Lisa F
Published in PloS one (2018)
Published in PloS one (2018)
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Expanded COVID-19 phenotype definitions reveal distinct patterns of genetic association and protective effects
Roberts, Genevieve H. L., Partha, Raghavendran, Rhead, Brooke, Knight, Spencer C., Park, Danny S., Coignet, Marie V., Zhang, Miao, Berkowitz, Nathan, Turrisini, David A., Gaddis, Michael, McCurdy, Shannon R., Pavlovic, Milos, Ruiz, Luong, Sass, Chodon, Haug Baltzell, Asher K., Guturu, Harendra, Girshick, Ahna R., Ball, Catherine A., Hong, Eurie L., Rand, Kristin A.
Published in Nature genetics (01.04.2022)
Published in Nature genetics (01.04.2022)
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The ENCODE Project at UC Santa Cruz
Thomas, Daryl J, Rosenbloom, Kate R, Clawson, Hiram, Hinrichs, Angie S, Trumbower, Heather, Raney, Brian J, Karolchik, Donna, Barber, Galt P, Harte, Rachel A, Hillman-Jackson, Jennifer, Kuhn, Robert M, Rhead, Brooke L, Smith, Kayla E, Thakkapallayil, Archana
Published in Nucleic acids research (01.01.2007)
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Published in Nucleic acids research (01.01.2007)
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ENCODE Project at UC Santa Cruz
Thomas, Daryl J, Rosenbloom, Kate R, Clawson, Hiram, Hinrichs, Angie S, Trumbower, Heather, Raney, Brian J, Karolchik, Donna, Barber, Galt P, Harte, Rachel A, Hillman-Jackson, Jennifer, Kuhn, Robert M, Rhead, Brooke L, Smith, Kayla E, Thakkapallayil, Archana, Zweig, Ann S, Haussler, David, Kent, W. James
Published in Nucleic acids research (01.01.2007)
Published in Nucleic acids research (01.01.2007)
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miRNA contributions to pediatric‐onset multiple sclerosis inferred from GWAS
Rhead, Brooke, Shao, Xiaorong, Graves, Jennifer S., Chitnis, Tanuja, Waldman, Amy T., Lotze, Timothy, Schreiner, Teri, Belman, Anita, Krupp, Lauren, Greenberg, Benjamin M., Weinstock–Guttman, Bianca, Aaen, Gregory, Tillema, Jan M., Rodriguez, Moses, Hart, Janace, Caillier, Stacy, Ness, Jayne, Harris, Yolanda, Rubin, Jennifer, Candee, Meghan S., Gorman, Mark, Benson, Leslie, Mar, Soe, Kahn, Ilana, Rose, John, Casper, T. Charles, Quach, Hong, Quach, Diana, Schaefer, Catherine, Waubant, Emmanuelle, Barcellos, Lisa F.
Published in Annals of clinical and translational neurology (01.06.2019)
Published in Annals of clinical and translational neurology (01.06.2019)
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Variation resources at UC Santa Cruz
Thomas, Daryl J, Trumbower, Heather, Kern, Andrew D, Rhead, Brooke L, Kuhn, Robert M, Haussler, David, Kent, W James
Published in Nucleic acids research (01.01.2007)
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Published in Nucleic acids research (01.01.2007)
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Variation resources at UC Santa Cruz
Thomas, Daryl J., Trumbower, Heather, Kern, Andrew D., Rhead, Brooke L., Kuhn, Robert M., Haussler, David, Kent, W. James
Published in Nucleic acids research (01.01.2007)
Published in Nucleic acids research (01.01.2007)
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Identification of Novel Inhibitors of Bacterial Translation Elongation Factors
JAYASEKERA, Maithri M. K, ONHEIBER, Keysha, DELCAMP, Tavner, SHAOMING HUANG, WOLIN, Ronald, BOBKOVA, Ekaterina V, SHAW, Karen Joy, KEITH, John, VENKATESAN, Hariharan, SANTILLAN, Alejandro, STOCKING, Emily M, LIU TANG, MILLER, Jennifer, GOMEZ, Leslie, RHEAD, Brooke
Published in Antimicrobial Agents and Chemotherapy (01.01.2005)
Published in Antimicrobial Agents and Chemotherapy (01.01.2005)
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Racial and genetic ancestry associations with gene expression patterns in a real-world cohort of colorectal cancer patients
Hein, David, Rhead, Brooke, Pouliot, Yannick, Guinney, Justin, De La Vega, Francisco M, Sanford, Nina Niu
Published in Journal of clinical oncology (01.06.2023)
Published in Journal of clinical oncology (01.06.2023)
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