MpoxRadar: a worldwide MPXV genomic surveillance dashboard
Nasri, Ferdous, Kongkitimanon, Kunaphas, Wittig, Alice, Cortés, Jorge Sánchez, Brinkmann, Annika, Nitsche, Andreas, Schmachtenberg , Anna-Juliane, Renard, Bernhard Y, Fuchs, Stephan
Published in Nucleic acids research (05.07.2023)
Published in Nucleic acids research (05.07.2023)
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Journal Article
DUDes: a top-down taxonomic profiler for metagenomics
Piro, Vitor C, Lindner, Martin S, Renard, Bernhard Y
Published in Bioinformatics (Oxford, England) (01.08.2016)
Published in Bioinformatics (Oxford, England) (01.08.2016)
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Journal Article
Hitac: a hierarchical taxonomic classifier for fungal ITS sequences compatible with QIIME2
Miranda, Fábio M, Azevedo, Vasco C, Ramos, Rommel J, Renard, Bernhard Y, Piro, Vitor C
Published in BMC bioinformatics (02.07.2024)
Published in BMC bioinformatics (02.07.2024)
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Journal Article
seq-seq-pan: building a computational pan-genome data structure on whole genome alignment
Jandrasits, Christine, Dabrowski, Piotr W, Fuchs, Stephan, Renard, Bernhard Y
Published in BMC genomics (15.01.2018)
Published in BMC genomics (15.01.2018)
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Journal Article
Parasitic Nematodes Exert Antimicrobial Activity and Benefit From Microbiota-Driven Support for Host Immune Regulation
Rausch, Sebastian, Midha, Ankur, Kuhring, Matthias, Affinass, Nicole, Radonic, Aleksandar, Kühl, Anja A, Bleich, André, Renard, Bernhard Y, Hartmann, Susanne
Published in Frontiers in immunology (08.10.2018)
Published in Frontiers in immunology (08.10.2018)
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Journal Article
The Proteome of the Isolated Chlamydia trachomatis Containing Vacuole Reveals a Complex Trafficking Platform Enriched for Retromer Components
Aeberhard, Lukas, Banhart, Sebastian, Fischer, Martina, Jehmlich, Nico, Rose, Laura, Koch, Sophia, Laue, Michael, Renard, Bernhard Y, Schmidt, Frank, Heuer, Dagmar
Published in PLoS pathogens (01.06.2015)
Published in PLoS pathogens (01.06.2015)
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Journal Article
LazyFox: fast and parallelized overlapping community detection in large graphs
Garrels, Tim, Khodabakhsh, Athar, Renard, Bernhard Y, Baum, Katharina
Published in PeerJ. Computer science (20.04.2023)
Published in PeerJ. Computer science (20.04.2023)
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Journal Article
Life Cycle Stage-resolved Proteomic Analysis of the Excretome/Secretome from Strongyloides ratti—Identification of Stage-specific Proteases
Soblik, Hanns, Younis, Abuelhassan Elshazly, Mitreva, Makedonka, Renard, Bernhard Y., Kirchner, Marc, Geisinger, Frank, Steen, Hanno, Brattig, Norbert W.
Published in Molecular & cellular proteomics (01.12.2011)
Published in Molecular & cellular proteomics (01.12.2011)
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Journal Article
RAMBO-K: Rapid and Sensitive Removal of Background Sequences from Next Generation Sequencing Data
Tausch, Simon H, Renard, Bernhard Y, Nitsche, Andreas, Dabrowski, Piotr Wojciech
Published in PloS one (17.09.2015)
Published in PloS one (17.09.2015)
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Journal Article
Silent Witness: Dual-Species Transcriptomics Reveals Epithelial Immunological Quiescence to Helminth Larval Encounter and Fostered Larval Development
Ebner, Friederike, Kuhring, Mathias, Radonić, Aleksandar, Midha, Ankur, Renard, Bernhard Y, Hartmann, Susanne
Published in Frontiers in immunology (15.08.2018)
Published in Frontiers in immunology (15.08.2018)
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Journal Article
Concise Representation of Mass Spectrometry Images by Probabilistic Latent Semantic Analysis
Hanselmann, Michael, Kirchner, Marc, Renard, Bernhard Y, Amstalden, Erika R, Glunde, Kristine, Heeren, Ron M. A, Hamprecht, Fred A
Published in Analytical chemistry (Washington) (15.12.2008)
Published in Analytical chemistry (Washington) (15.12.2008)
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Journal Article
FLEXIQuant-LF to quantify protein modification extent in label-free proteomics data
Schlaffner, Christoph N, Kahnert, Konstantin, Muntel, Jan, Chauhan, Ruchi, Renard, Bernhard Y, Steen, Judith A, Steen, Hanno
Published in eLife (07.12.2020)
Published in eLife (07.12.2020)
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Journal Article
Quantitative comparison of a human cancer cell surface proteome between interphase and mitosis
Özlü, Nurhan, Qureshi, Mohammad H, Toyoda, Yusuke, Renard, Bernhard Y, Mollaoglu, Gürkan, Özkan, Nazlı E, Bulbul, Selda, Poser, Ina, Timm, Wiebke, Hyman, Anthony A, Mitchison, Timothy J, Steen, Judith A
Published in The EMBO journal (14.01.2015)
Published in The EMBO journal (14.01.2015)
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Journal Article