Inference for nonlinear epidemiological models using genealogies and time series
Rasmussen, David A, Ratmann, Oliver, Koelle, Katia
Published in PLoS computational biology (01.08.2011)
Published in PLoS computational biology (01.08.2011)
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Journal Article
Phylodynamic inference for structured epidemiological models
Rasmussen, David A, Volz, Erik M, Koelle, Katia
Published in PLoS computational biology (01.04.2014)
Published in PLoS computational biology (01.04.2014)
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Journal Article
Recombination-aware phylogeographic inference using the structured coalescent with ancestral recombination
Guo, Fangfang, Carbone, Ignazio, Rasmussen, David A
Published in PLoS computational biology (01.08.2022)
Published in PLoS computational biology (01.08.2022)
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Journal Article
Aphid Transmission of Potyvirus : The Largest Plant-Infecting RNA Virus Genus
Gadhave, Kiran R, Gautam, Saurabh, Rasmussen, David A, Srinivasan, Rajagopalbabu
Published in Viruses (17.07.2020)
Published in Viruses (17.07.2020)
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Journal Article
The Structured Coalescent and Its Approximations
Müller, Nicola F, Rasmussen, David A, Stadler, Tanja
Published in Molecular biology and evolution (01.11.2017)
Published in Molecular biology and evolution (01.11.2017)
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Journal Article
BEAST 2.5: An advanced software platform for Bayesian evolutionary analysis
Bouckaert, Remco, Vaughan, Timothy G, Barido-Sottani, Joëlle, Duchêne, Sebastián, Fourment, Mathieu, Gavryushkina, Alexandra, Heled, Joseph, Jones, Graham, Kühnert, Denise, De Maio, Nicola, Matschiner, Michael, Mendes, Fábio K, Müller, Nicola F, Ogilvie, Huw A, du Plessis, Louis, Popinga, Alex, Rambaut, Andrew, Rasmussen, David, Siveroni, Igor, Suchard, Marc A, Wu, Chieh-Hsi, Xie, Dong, Zhang, Chi, Stadler, Tanja, Drummond, Alexei J
Published in PLoS computational biology (08.04.2019)
Published in PLoS computational biology (08.04.2019)
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Diversity and Pathobiology of an Ilarvirus Unexpectedly Detected in Diverse Plants and Global Sequencing Data
Rivarez, Mark Paul Selda, Faure, Chantal, Svanella-Dumas, Laurence, Pecman, Anja, Tušek-Žnidaric, Magda, Schönegger, Deborah, De Jonghe, Kris, Blouin, Arnaud, Rasmussen, David A, Massart, Sebastien, Ravnikar, Maja, Kutnjak, Denis, Marais, Armelle, Candresse, Thierry
Published in Phytopathology (01.09.2023)
Published in Phytopathology (01.09.2023)
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Web Resource
Estimating Epidemic Incidence and Prevalence from Genomic Data
Vaughan, Timothy G, Leventhal, Gabriel E, Rasmussen, David A, Drummond, Alexei J, Welch, David, Stadler, Tanja
Published in Molecular biology and evolution (01.08.2019)
Published in Molecular biology and evolution (01.08.2019)
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Journal Article
Phylodynamics on local sexual contact networks
Rasmussen, David A, Kouyos, Roger, Günthard, Huldrych F, Stadler, Tanja
Published in PLoS computational biology (01.03.2017)
Published in PLoS computational biology (01.03.2017)
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Journal Article
Taming the BEAST—A Community Teaching Material Resource for BEAST 2
Barido-Sottani, Joëlle, Bošková, Veronika, du Plessis, Louis, Kühnert, Denise, Magnus, Carsten, Mitov, Venelin, Müller, Nicola F., Pečerska, Jūlija, Rasmussen, David A., Zhang, Chi, Drummond, Alexei J., Heath, Tracy A., Pybus, Oliver G., Vaughan, Timothy G., Stadler, Tanja
Published in Systematic biology (01.01.2018)
Published in Systematic biology (01.01.2018)
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