A comprehensive spectral assay library to quantify the Halobacterium salinarum NRC-1 proteome by DIA/SWATH-MS
Kusebauch, Ulrike, Lorenzetti, Alan P. R., Campbell, David S., Pan, Min, Shteynberg, David, Kapil, Charu, Midha, Mukul K., López García de Lomana, Adrián, Baliga, Nitin S., Moritz, Robert L.
Published in Scientific data (13.10.2023)
Published in Scientific data (13.10.2023)
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Journal Article
Iron Deficiency Generates Oxidative Stress and Activation of the SOS Response in Caulobacter crescentus
Leaden, Laura, Silva, Larissa G, Ribeiro, Rodolfo A, Dos Santos, Naara M, Lorenzetti, Alan P R, Alegria, Thiago G P, Schulz, Mariane L, Medeiros, Marisa H G, Koide, Tie, Marques, Marilis V
Published in Frontiers in microbiology (28.08.2018)
Published in Frontiers in microbiology (28.08.2018)
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Journal Article
The DEAD-box RNA helicase RhlB is required for efficient RNA processing at low temperature in Caulobacter
de Araújo, Hugo L, Picinato, Beatriz A, Lorenzetti, Alan P R, Muthunayake, Nisansala S, Rathnayaka-Mudiyanselage, I W, Dos Santos, Naara M, Schrader, Jared, Koide, Tie, Marques, Marilis V
Published in Microbiology spectrum (12.12.2023)
Published in Microbiology spectrum (12.12.2023)
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Journal Article
Selective Translation of Low Abundance and Upregulated Transcripts in Halobacterium salinarum
López García de Lomana, Adrián, Kusebauch, Ulrike, Raman, Arjun V., Pan, Min, Turkarslan, Serdar, Lorenzetti, Alan P. R., Moritz, Robert L., Baliga, Nitin S.
Published in mSystems (01.08.2020)
Published in mSystems (01.08.2020)
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Journal Article
A Genome-Scale Atlas Reveals Complex Interplay of Transcription and Translation in an Archaeon
Lorenzetti, Alan P R, Kusebauch, Ulrike, Zaramela, Lívia S, Wu, Wei-Ju, de Almeida, João P P, Turkarslan, Serdar, L G de Lomana, Adrián, Gomes-Filho, José V, Vêncio, Ricardo Z N, Moritz, Robert L, Koide, Tie, Baliga, Nitin S
Published in mSystems (27.04.2023)
Published in mSystems (27.04.2023)
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Journal Article
OxyR and the hydrogen peroxide stress response in Caulobacter crescentus
Silva, Larissa G., Lorenzetti, Alan P.R., Ribeiro, Rodolfo A., Alves, Ingrid R., Leaden, Laura, Galhardo, Rodrigo S., Koide, Tie, Marques, Marilis V.
Published in Gene (05.06.2019)
Published in Gene (05.06.2019)
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Journal Article
An integrated analysis of mRNA and sRNA transcriptional profiles in Coffea arabica L. roots: insights on nitrogen starvation responses
dos Santos, Tiago Benedito, Soares, João D. M., Lima, Joni E., Silva, Juliana C., Ivamoto, Suzana T., Baba, Viviane Y., Souza, Silvia G. H., Lorenzetti, Alan P. R., Paschoal, Alexandre R., Meda, Anderson R., Nishiyama Júnior, Milton Y., de Oliveira, Úrsula C., Mokochinski, João B., Guyot, Romain, Junqueira-de-Azevedo, Inácio L. M., Figueira, Antônio V. O., Mazzafera, Paulo, Júnior, Osvaldo R., Vieira, Luiz G. E., Pereira, Luiz F. P., Domingues, Douglas S.
Published in Functional & integrative genomics (2019)
Published in Functional & integrative genomics (2019)
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Journal Article
The Primary Antisense Transcriptome of Halobacterium salinarum NRC-1
de Almeida, João Paulo Pereira, Vêncio, Ricardo Z N, Lorenzetti, Alan P R, Caten, Felipe Ten, Gomes-Filho, José Vicente, Koide, Tie
Published in Genes (05.04.2019)
Published in Genes (05.04.2019)
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Journal Article
A genome-scale atlas reveals complex interplay of transcription and translation in an archaeon
Lorenzetti, Alan P R, Kusebauch, Ulrike, Zaramela, Lívia S, Wei-Ju, Wu, João P P De Almeida, Turkarslan, Serdar, Adrián López García De Lomana, Gomes-Filho, José V, Vêncio, Ricardo Z N, Moritz, Robert L, Koide, Tie, Baliga, Nitin S
Published in bioRxiv (03.09.2022)
Published in bioRxiv (03.09.2022)
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