A Candida auris Outbreak and Its Control in an Intensive Care Setting
Eyre, David W, Sheppard, Anna E, Madder, Hilary, Moir, Ian, Moroney, Ruth, Quan, T. Phuong, Griffiths, David, George, Sophie, Butcher, Lisa, Morgan, Marcus, Newnham, Robert, Sunderland, Mary, Clarke, Tiphanie, Foster, Dona, Hoffman, Peter, Borman, Andrew M, Johnson, Elizabeth M, Moore, Ginny, Brown, Colin S, Walker, A. Sarah, Peto, Tim E.A, Crook, Derrick W, Jeffery, Katie J.M
Published in The New England journal of medicine (04.10.2018)
Published in The New England journal of medicine (04.10.2018)
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Journal Article
Mortality risks associated with emergency admissions during weekends and public holidays: an analysis of electronic health records
Walker, A Sarah, Prof, Mason, Amy, DPhil, Quan, T Phuong, MSc, Fawcett, Nicola J, MBChB, Watkinson, Peter, MD, Llewelyn, Martin, Prof, Stoesser, Nicole, DPhil, Finney, John, MSc, Davies, Jim, Prof, Wyllie, David H, DPhil, Crook, Derrick W, Prof, Peto, Tim E A, Prof
Published in The Lancet (British edition) (01.07.2017)
Published in The Lancet (British edition) (01.07.2017)
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Journal Article
Evaluation of Whole-Genome Sequencing for Mycobacterial Species Identification and Drug Susceptibility Testing in a Clinical Setting: a Large-Scale Prospective Assessment of Performance against Line Probe Assays and Phenotyping
Quan, T Phuong, Bawa, Zharain, Foster, Dona, Walker, Tim, Del Ojo Elias, Carlos, Rathod, Priti, Iqbal, Zamin, Bradley, Phelim, Mowbray, Janet, Walker, A Sarah, Crook, Derrick W, Wyllie, David H, Peto, Timothy E A, Smith, E Grace
Published in Journal of clinical microbiology (01.02.2018)
Published in Journal of clinical microbiology (01.02.2018)
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Journal Article
Effects of control interventions on Clostridium difficile infection in England: an observational study
Dingle, Kate E, Dr, Didelot, Xavier, DPhil, Quan, T Phuong, MSc, Eyre, David W, DPhil, Stoesser, Nicole, MBBS, Golubchik, Tanya, PhD, Harding, Rosalind M, PhD, Wilson, Daniel J, DPhil, Griffiths, David, BSc, Vaughan, Alison, BSc, Finney, John M, BSc, Wyllie, David H, PhD, Oakley, Sarah J, MSc, Fawley, Warren N, PhD, Freeman, Jane, PhD, Morris, Kirsti, PhD, Martin, Jessica, MRCP, Howard, Philip, FRPharmS, Gorbach, Sherwood, Prof, Goldstein, Ellie J C, Prof, Citron, Diane M, BSc, Hopkins, Susan, MD, Hope, Russell, PhD, Johnson, Alan P, Prof, Wilcox, Mark H, Prof, Peto, Timothy E A, Prof, Walker, A Sarah, Prof, Crook, Derrick W, Prof
Published in The Lancet infectious diseases (01.04.2017)
Published in The Lancet infectious diseases (01.04.2017)
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Journal Article
Trends over time in Escherichia coli bloodstream infections, urinary tract infections, and antibiotic susceptibilities in Oxfordshire, UK, 1998–2016: a study of electronic health records
Vihta, Karina-Doris, Stoesser, Nicole, Llewelyn, Martin J, Quan, T Phuong, Davies, Tim, Fawcett, Nicola J, Dunn, Laura, Jeffery, Katie, Butler, Chris C, Hayward, Gail, Andersson, Monique, Morgan, Marcus, Oakley, Sarah, Mason, Amy, Hopkins, Susan, Wyllie, David H, Crook, Derrick W, Wilcox, Mark H, Johnson, Alan P, Peto, Tim E A, Walker, A Sarah
Published in The Lancet infectious diseases (01.10.2018)
Published in The Lancet infectious diseases (01.10.2018)
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Journal Article
Epidemiology of Clostridium difficile in infants in Oxfordshire, UK: Risk factors for colonization and carriage, and genetic overlap with regional C. difficile infection strains
Stoesser, Nicole, Eyre, David W, Quan, T Phuong, Godwin, Heather, Pill, Gemma, Mbuvi, Emily, Vaughan, Alison, Griffiths, David, Martin, Jessica, Fawley, Warren, Dingle, Kate E, Oakley, Sarah, Wanelik, Kazimierz, Finney, John M, Kachrimanidou, Melina, Moore, Catrin E, Gorbach, Sherwood, Riley, Thomas V, Crook, Derrick W, Peto, Tim E A, Wilcox, Mark H, Walker, A Sarah
Published in PloS one (16.08.2017)
Published in PloS one (16.08.2017)
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Journal Article
Increasing burden of community-acquired pneumonia leading to hospitalisation, 1998–2014
Quan, T Phuong, Fawcett, Nicola J, Wrightson, John M, Finney, John, Wyllie, David, Jeffery, Katie, Jones, Nicola, Shine, Brian, Clarke, Lorraine, Crook, Derrick, Walker, A Sarah, Peto, Timothy E A
Published in Thorax (01.06.2016)
Published in Thorax (01.06.2016)
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Journal Article
Investigation of the impact of the NICE guidelines regarding antibiotic prophylaxis during invasive dental procedures on the incidence of infective endocarditis in England: an electronic health records study
Quan, T Phuong, Muller-Pebody, Berit, Fawcett, Nicola, Young, Bernadette C, Minaji, Mehdi, Sandoe, Jonathan, Hopkins, Susan, Crook, Derrick, Peto, Timothy, Johnson, Alan P, Walker, A Sarah
Published in BMC medicine (02.04.2020)
Published in BMC medicine (02.04.2020)
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Journal Article
Reconciling the Potentially Irreconcilable? Genotypic and Phenotypic Amoxicillin-Clavulanate Resistance in Escherichia coli
Davies, Timothy J, Stoesser, Nicole, Sheppard, Anna E, Abuoun, Manal, Fowler, Philip, Swann, Jeremy, Quan, T Phuong, Griffiths, David, Vaughan, Alison, Morgan, Marcus, Phan, Hang T T, Jeffery, Katie J, Andersson, Monique, Ellington, Matt J, Ekelund, Oskar, Woodford, Neil, Mathers, Amy J, Bonomo, Robert A, Crook, Derrick W, Peto, Tim E A, Anjum, Muna F, Walker, A Sarah
Published in Antimicrobial agents and chemotherapy (21.05.2020)
Published in Antimicrobial agents and chemotherapy (21.05.2020)
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Journal Article
Antimicrobial resistance in commensal opportunistic pathogens isolated from non-sterile sites can be an effective proxy for surveillance in bloodstream infections
Vihta, Karina-Doris, Gordon, Nicola Claire, Stoesser, Nicole, Quan, T. Phuong, Tyrrell, Carina S. B., Vongsouvath, Manivanh, Ashley, Elizabeth A., Chansamouth, Vilada, Turner, Paul, Ling, Clare L., Eyre, David W., White, Nicholas J., Crook, Derrick, Peto, Tim E. A., Walker, Ann Sarah
Published in Scientific reports (03.12.2021)
Published in Scientific reports (03.12.2021)
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Journal Article
Mycobacterial DNA extraction for whole-genome sequencing from early positive liquid (MGIT) cultures
Votintseva, Antonina A, Pankhurst, Louise J, Anson, Luke W, Morgan, Marcus R, Gascoyne-Binzi, Deborah, Walker, Timothy M, Quan, T Phuong, Wyllie, David H, Del Ojo Elias, Carlos, Wilcox, Mark, Walker, A Sarah, Peto, Tim E A, Crook, Derrick W
Published in Journal of clinical microbiology (01.04.2015)
Published in Journal of clinical microbiology (01.04.2015)
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Journal Article
'Caveat emptor': the cautionary tale of endocarditis and the potential pitfalls of clinical coding data-an electronic health records study
Fawcett, Nicola, Young, Bernadette, Peto, Leon, Quan, T Phuong, Gillott, Richard, Wu, Jianhua, Middlemass, Chris, Weston, Sheila, Crook, Derrick W, Peto, Tim E A, Muller-Pebody, Berit, Johnson, Alan P, Walker, A Sarah, Sandoe, Jonathan A T
Published in BMC medicine (04.09.2019)
Published in BMC medicine (04.09.2019)
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Journal Article
Using linked electronic health records to report healthcare-associated infections
Quan, T Phuong, Hope, Russell, Clarke, Tiphanie, Moroney, Ruth, Butcher, Lisa, Knight, Peter, Crook, Derrick, Hopkins, Susan, Peto, Timothy E A, Johnson, Alan P, Walker, A Sarah
Published in PloS one (07.11.2018)
Published in PloS one (07.11.2018)
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Journal Article
Penicillin Binding Protein Substitutions Cooccur with Fluoroquinolone Resistance in Epidemic Lineages of Multidrug-Resistant Clostridioides difficile
Dingle, Kate E, Freeman, Jane, Didelot, Xavier, Quan, T Phuong, Eyre, David W, Swann, Jeremy, Spittal, William D, Clark, Emma V, Jolley, Keith A, Walker, A Sarah, Wilcox, Mark H, Crook, Derrick W
Published in mBio (25.04.2023)
Published in mBio (25.04.2023)
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Journal Article
Genomic surveillance of Escherichia coli and Klebsiella spp. in hospital sink drains and patients
Constantinides, Bede, Chau, Kevin K, Quan, T Phuong, Rodger, Gillian, Andersson, Monique I, Jeffery, Katie, Lipworth, Sam, Gweon, Hyun S, Peniket, Andy, Pike, Graham, Millo, Julian, Byukusenge, Mary, Holdaway, Matt, Gibbons, Cat, Mathers, Amy J, Crook, Derrick W, Peto, Timothy E A, Walker, A Sarah, Stoesser, Nicole
Published in Microbial genomics (01.07.2020)
Published in Microbial genomics (01.07.2020)
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Journal Article
Combining Charlson and Elixhauser scores with varying lookback predicated mortality better than using individual scores
Pritchard, Emma, Fawcett, Nicola, Quan, T. Phuong, Crook, Derrick, Peto, Tim EA, Walker, A. Sarah
Published in Journal of clinical epidemiology (01.02.2021)
Published in Journal of clinical epidemiology (01.02.2021)
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Journal Article
A Role for Tetracycline Selection in Recent Evolution of Agriculture-Associated Clostridium difficile PCR Ribotype 078
Dingle, Kate E, Didelot, Xavier, Quan, T Phuong, Eyre, David W, Stoesser, Nicole, Marwick, Charis A, Coia, John, Brown, Derek, Buchanan, Sarah, Ijaz, Umer Z, Goswami, Cosmika, Douce, Gill, Fawley, Warren N, Wilcox, Mark H, Peto, Timothy E A, Walker, A Sarah, Crook, Derrick W
Published in mBio (12.03.2019)
Published in mBio (12.03.2019)
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Journal Article
Contribution to Clostridium Difficile Transmission of Symptomatic Patients With Toxigenic Strains Who Are Fecal Toxin Negative
Mawer, Damian P. C., Eyre, David W., Griffiths, David, Fawley, Warren N., Martin, Jessica S. H., Quan, T. Phuong, Peto, Timothy E. A., Crook, Derrick W., Walker, A. Sarah, Wilcox, Mark H.
Published in Clinical infectious diseases (01.05.2017)
Published in Clinical infectious diseases (01.05.2017)
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Journal Article