Genome-resolved metagenomics suggests a mutualistic relationship between Mycoplasma and salmonid hosts
Rasmussen, Jacob A, Villumsen, Kasper R, Duchêne, David A, Puetz, Lara C, Delmont, Tom O, Sveier, Harald, Jørgensen, Louise von Gersdorff, Præbel, Kim, Martin, Michael D, Bojesen, Anders M, Gilbert, M Thomas P, Kristiansen, Karsten, Limborg, Morten T
Published in Communications biology (14.05.2021)
Published in Communications biology (14.05.2021)
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GC bias affects genomic and metagenomic reconstructions, underrepresenting GC-poor organisms
Browne, Patrick Denis, Nielsen, Tue Kjærgaard, Kot, Witold, Aggerholm, Anni, Gilbert, M Thomas P, Puetz, Lara, Rasmussen, Morten, Zervas, Athanasios, Hansen, Lars Hestbjerg
Published in Gigascience (01.02.2020)
Published in Gigascience (01.02.2020)
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Diabetic cats have decreased gut microbial diversity and a lack of butyrate producing bacteria
Kieler, Ida Nordang, Osto, Melania, Hugentobler, Leoni, Puetz, Lara, Gilbert, M Thomas P, Hansen, Torben, Pedersen, Oluf, Reusch, Claudia E, Zini, Eric, Lutz, Thomas A, Bjørnvad, Charlotte Reinhard
Published in Scientific reports (18.03.2019)
Published in Scientific reports (18.03.2019)
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A comparison of storage methods for gut microbiome studies in teleosts: Insights from rainbow trout (Oncorhynchus mykiss)
Hildonen, Mathis, Kodama, Miyako, Puetz, Lara C., Gilbert, M. Thomas P., Limborg, Morten T.
Published in Journal of microbiological methods (01.05.2019)
Published in Journal of microbiological methods (01.05.2019)
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Gut Microbiota Linked with Reduced Fear of Humans in Red Junglefowl Has Implications for Early Domestication
Puetz, Lara C., Delmont, Tom O., Aizpurua, Ostaizka, Guo, Chunxue, Zhang, Guojie, Katajamaa, Rebecca, Jensen, Per, Gilbert, M. Thomas P.
Published in Genetics & genomics next (01.12.2021)
Published in Genetics & genomics next (01.12.2021)
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Conservation genomics of the endangered Seychelles Magpie‐Robin (Copsychus sechellarum): a unique insight into the history of a precious endemic bird
Cavill, Emily L., Gopalakrishnan, Shyam, Puetz, Lara C., Ribeiro, Ângela M., Mak, Sarah S. T., da Fonseca, Rute R., Pacheco, George, Dunlop, Bronwyn, Accouche, Wilna, Shah, Nirmal, Zora, Anna, Calabrese, Licia, Genner, Martin, Jones, Gareth, Guo, Chunxue, Zhang, Guojie, Gilbert, M. Thomas P.
Published in Ibis (London, England) (01.04.2022)
Published in Ibis (London, England) (01.04.2022)
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Releasing the microbes from old bones: the effect of different DNA extraction protocols on microbial community profiling
Eriksen, Anne Marie Høier, Puetz, Lara, Rocha, Carolina, Nielsen, Tue K., Hansen, Lars H., Gilbert, M. Thomas P.
Published in Science and technology of archaeological research (01.01.2020)
Published in Science and technology of archaeological research (01.01.2020)
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An integrated morphological–molecular approach reveals new insights on the systematics of the octocoral
Poliseno, Angelo, Altuna, Alvaro, Puetz, Lara C., Mak, Sarah S. T., Ríos, Pilar, Petroni, Emily, McFadden, Catherine S., Sørensen, Martin V., Gilbert, M. Thomas P.
Published in Invertebrate systematics (24.03.2021)
Published in Invertebrate systematics (24.03.2021)
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31° South: The physiology of adaptation to arid conditions in a passerine bird
Ribeiro, Ângela M., Puetz, Lara, Pattinson, Nicholas B., Dalén, Love, Deng, Yuan, Zhang, Guojie, Fonseca, Rute R., Smit, Ben, Gilbert, M. Thomas P.
Published in Molecular ecology (01.08.2019)
Published in Molecular ecology (01.08.2019)
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31 degrees South: The physiology of adaptation to arid conditions in a passerine bird
Ribeiro, Angela M., Puetz, Lara, Pattinson, Nicholas B., Dalen, Love, Deng, Yuan, Zhang, Guojie, da Fonseca, Rute R., Smit, Ben, Gilbert, M. Thomas P.
Published in Molecular ecology (2019)
Published in Molecular ecology (2019)
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Journal Article
Dense sampling of bird diversity increases power of comparative genomics
Feng, Shaohong, Stiller, Josefin, Deng, Yuan, Armstrong, Joel, Fang, Qi, Xie, Duo, Chen, Guangji, Guo, Chunxue, Petersen, Bent, Wang, Zongji, Zhou, Qi, Diekhans, Mark, Chen, Wanjun, Andreu-Sánchez, Sergio, Margaryan, Ashot, Howard, Jason Travis, Parent, Carole, Sinding, Mikkel-Holger S, Cavill, Emily, Ribeiro, Ângela M, Eckhart, Leopold, Hosner, Peter A, Brumfield, Robb T, Christidis, Les, Bertelsen, Mads F, Tietze, Dieter Thomas, Song, Gang, Lovette, Irby J, Dumbacher, John Philip, Bunce, Michael, Burt, David W, Cracraft, Joel, Meng, Guanliang, Hackett, Shannon J, Ryan, Peter G, Jamieson, Ian G, da Fonseca, Rute R, Braun, Edward L, Mirarab, Siavash, Suh, Alexander, Ponnikas, Suvi, van der Zwan, Henriette, van der Sluis, Rencia, Visser, Carina, Balakrishnan, Christopher N, Clark, Andrew G, Fitzpatrick, John W, Bowman, Reed, Chen, Nancy, Cloutier, Alison, Edwards, Scott V, Foote, Dustin J, Shakya, Subir B, Vignal, Alain, González-Solís, Jacob, Ferrer-Obiol, Joan, Rozas, Julio, Friesen, Vicki, Urrutia, Araxi O, Székely, Tamás, Liu, Yang, Campana, Michael G, Fleischer, Robert C, Rutherford, Kim M, Dussex, Nicolas, Delmore, Kira, Liedvogel, Miriam, Franke, Andre, Krone, Oliver, Fudickar, Adam M, Milá, Borja, Ketterson, Ellen D, Parody-Merino, Ángela M, Battley, Phil F, Cox, Murray P, Lima, Nicholas Costa Barroso, Parchman, Thomas Lee, Schlinger, Barney A, Loiselle, Bette A, Blake, John G, Fuxjager, Matthew J, Baldwin, Maude W, Braun, Michael J, Wirthlin, Morgan, Camenisch, Glauco, Keller, Lukas F, DaCosta, Jeffrey M, Hauber, Mark E, Carling, Matthew D, Del-Rio, Glaucia, Aleixo, Alexandre, Vasconcelos, Ana Tereza Ribeiro, Weir, Jason T, Haussler, David, Yang, Huanming, Rahbek, Carsten, Gilbert, M Thomas P, Graves, Gary R, Jarvis, Erich D, Paten, Benedict
Published in Nature (London) (12.11.2020)
Published in Nature (London) (12.11.2020)
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An integrated morphological–molecular approach reveals new insights on the systematics of the octocoral Telestula humilis (Thomson, 1927) (Octocorallia : Alcyonacea : Clavulariidae)
Poliseno, Angelo, Altuna, Alvaro, Puetz, Lara C., Mak, Sarah S. T., Ríos, Pilar, Petroni, Emily, McFadden, Catherine S., Sørensen, Martin V., Gilbert, M. Thomas P.
Published in Invertebrate systematics (01.05.2021)
Published in Invertebrate systematics (01.05.2021)
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Journal Article
Dense sampling of bird diversity increases power of comparative genomics (vol 587, pg 252, 2020)
Stiller, J, Deng, Y, Armstrong, J, Fang, Q, Reeve, A H, Xie, D, Faircloth, B C, Diekhans, M, Margaryan, A, Howard, J T, Parent, C, Puetz, L, Cavill, E, Ribeiro, A M, Fjeldsa, J, Hosner, P A, Christidis, L, Tietze, D T, Robertson, B C, Song, G, Borgia, G, Cowen, S J, Njoroge, P, Dumbacher, J P, Ryder, O A, Fuchs, J, Bunce, M, Burt, D W, Meng, G L, Ryan, P G, Jamieson, I G, da Fonseca, R R, Braun, E L, Houde, P, Mirarab, S, Suh, A, Hansson, B, Frandsen, P B, Balakrishnan, C N, Clark, A G, Fitzpatrick, J W, Bowman, R, Chen, N, Cloutier, A, Edwards, S V, Foote, D J, Shakya, S B, Sheldon, F H, Shapiro, B, Gonzalez-Solis, J, Ferrer-Obiol, J, Riutort, M, Tigano, A, Friesen, V, Urrutia, A O, Szekely, T, Liu, Y, Campana, M G, Corvelo, A, Fleischer, R C, Gemmell, N J, Thiele, N, Delmore, K, Franke, A, Hoeppner, M P, Fudickar, A M, Mila, B, Fidler, A E, Friis, G, Parody-Merino, A M, Battley, P F, Cox, M P, Prosdocimi, F, Parchman, T L, Schlinger, B A, Loiselle, B A, Lim, H C, Fuxjager, M J, Baldwin, M W, Braun, M J, Wirthlin, M, Ryder, T B, Camenisch, G, Keller, L F, DaCosta, J M, Hauber, M E, Louder, M I M, Witt, C C, Carling, M D, Taylor, S A, Del-Rio, G, Aleixo, A, Vasconcelos, A T R, Mello, C V, Weir, J T, Haussler, D, Yang, H M, Wang, J, Paten, B, Zhang, G J
Published in Nature (London) (29.04.2021)
Published in Nature (London) (29.04.2021)
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Author Correction: Dense sampling of bird diversity increases power of comparative genomics
Feng, Shaohong, Stiller, Josefin, Deng, Yuan, Armstrong, Joel, Fang, Qi, Xie, Duo, Chen, Guangji, Guo, Chunxue, Petersen, Bent, Wang, Zongji, Zhou, Qi, Diekhans, Mark, Chen, Wanjun, Andreu-Sánchez, Sergio, Margaryan, Ashot, Howard, Jason Travis, Parent, Carole, Sinding, Mikkel-Holger S, Cavill, Emily, Ribeiro, Ângela M, Eckhart, Leopold, Hosner, Peter A, Brumfield, Robb T, Christidis, Les, Bertelsen, Mads F, Tietze, Dieter Thomas, Song, Gang, Lovette, Irby J, Dumbacher, John Philip, Bunce, Michael, Burt, David W, Cracraft, Joel, Meng, Guanliang, Hackett, Shannon J, Ryan, Peter G, Jamieson, Ian G, da Fonseca, Rute R, Braun, Edward L, Mirarab, Siavash, Suh, Alexander, Ponnikas, Suvi, van der Sluis, Rencia, Visser, Carina, Balakrishnan, Christopher N, Clark, Andrew G, Fitzpatrick, John W, Bowman, Reed, Chen, Nancy, Cloutier, Alison, Edwards, Scott V, Foote, Dustin J, Shakya, Subir B, Vignal, Alain, González-Solís, Jacob, Ferrer-Obiol, Joan, Rozas, Julio, Friesen, Vicki, Urrutia, Araxi O, Székely, Tamás, Liu, Yang, Campana, Michael G, Fleischer, Robert C, Rutherford, Kim M, Dussex, Nicolas, Delmore, Kira, Liedvogel, Miriam, Franke, Andre, Hoeppner, Marc P, Krone, Oliver, Fudickar, Adam M, Milá, Borja, Ketterson, Ellen D, Parody-Merino, Ángela M, Battley, Phil F, Cox, Murray P, Lima, Nicholas Costa Barroso, Parchman, Thomas Lee, Schlinger, Barney A, Loiselle, Bette A, Blake, John G, Fuxjager, Matthew J, Baldwin, Maude W, Braun, Michael J, Wirthlin, Morgan, Camenisch, Glauco, Keller, Lukas F, DaCosta, Jeffrey M, Hauber, Mark E, Carling, Matthew D, Del-Rio, Glaucia, Aleixo, Alexandre, Vasconcelos, Ana Tereza Ribeiro, Weir, Jason T, Haussler, David, Yang, Huanming, Rahbek, Carsten, Gilbert, M Thomas P, Graves, Gary R, Jarvis, Erich D, Paten, Benedict
Published in Nature (London) (29.04.2021)
Published in Nature (London) (29.04.2021)
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Journal Article
Dense sampling of bird diversity increases power of comparative genomics
Feng, Shaohong, Stiller, Josefin, Deng, Yuan, Armstrong, Joel, Fang, Qi, Reeve, Andrew Hart, Xie, Duo, Chen, Guangji, Guo, Chunxue, Faircloth, Brant, Petersen, Bent, Wang, Zongji, Zhou, Qi, Diekhans, Mark, Chen, Wanjun, Andreu-Sánchez, Sergio, Margaryan, Ashot, Howard, Jason Travis, Parent, Carole, Pacheco, George, Sinding, Mikkel-Holger, Puetz, Lara, Cavill, Emily, Ribeiro, Ângela, Eckhart, Leopold, Fjeldså, Jon, Hosner, Peter, Brumfield, Robb, Christidis, Les, Bertelsen, Mads, Sicheritz-Ponten, Thomas, Tietze, Dieter Thomas, Robertson, Bruce, Song, Gang, Borgia, Gerald, Claramunt, Santiago, Lovette, Irby, Cowen, Saul, Njoroge, Peter, Dumbacher, John Philip, Ryder, Oliver, Fuchs, Jérôme, Bunce, Michael, Burt, David, Cracraft, Joel, Meng, Guanliang, Hackett, Shannon, Ryan, Peter, Jønsson, Knud Andreas, Jamieson, Ian, da Fonseca, Rute, Braun, Edward, Houde, Peter, Mirarab, Siavash, Suh, Alexander, Hansson, Bengt, Ponnikas, Suvi, Sigeman, Hanna, Stervander, Martin, Frandsen, Paul, van der Zwan, Henriette, van der Sluis, Rencia, Visser, Carina, Balakrishnan, Christopher, Clark, Andrew, Fitzpatrick, John, Bowman, Reed, Chen, Nancy, Cloutier, Alison, Sackton, Timothy, Edwards, Scott, Foote, Dustin, Shakya, Subir, Sheldon, Frederick, Vignal, Alain, Soares, André, Shapiro, Beth, González-Solís, Jacob, Ferrer-Obiol, Joan, Rozas, Julio, Riutort, Marta, Tigano, Anna, Friesen, Vicki, Dalén, Love, Urrutia, Araxi, Székely, Tamás, Liu, Yang, Campana, Michael, Corvelo, André, Fleischer, Robert, Rutherford, Kim, Gemmell, Neil, Dussex, Nicolas, Mouritsen, Henrik, Thiele, Nadine, Delmore, Kira, Liedvogel, Miriam, Franke, Andre, Hoeppner, Marc, Krone, Oliver
Published in Nature (London) (12.11.2020)
Published in Nature (London) (12.11.2020)
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Influence of Oenococcus oeni and Brettanomyces bruxellensis on Aged Wine Microbial Taxonomic and Functional Profiles
Marie Lisandra Zepeda Mendoza, Nathalia Kruse Edwards, Mikkel Gulmann Madsen, Abel-Kistrup, Martin, Puetz, Lara, Thomas Sicheritz-Ponten, Swiegers, Jan H
Published in bioRxiv (08.11.2017)
Published in bioRxiv (08.11.2017)
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