An exclusive metabolic niche enables strain engraftment in the gut microbiota
Shepherd, Elizabeth Stanley, DeLoache, William C., Pruss, Kali M., Whitaker, Weston R., Sonnenburg, Justin L.
Published in Nature (London) (01.05.2018)
Published in Nature (London) (01.05.2018)
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Journal Article
Recovery of the Gut Microbiota after Antibiotics Depends on Host Diet, Community Context, and Environmental Reservoirs
Ng, Katharine Michelle, Aranda-Díaz, Andrés, Tropini, Carolina, Frankel, Matthew Ryan, Van Treuren, William, O’Loughlin, Colleen T., Merrill, Bryan Douglas, Yu, Feiqiao Brian, Pruss, Kali M., Oliveira, Rita Almeida, Higginbottom, Steven Kyle, Neff, Norma F., Fischbach, Michael Andrew, Xavier, Karina Bivar, Sonnenburg, Justin Laine, Huang, Kerwyn Casey
Published in Cell host & microbe (13.11.2019)
Published in Cell host & microbe (13.11.2019)
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Journal Article
Host-microbe co-metabolism via MCAD generates circulating metabolites including hippuric acid
Pruss, Kali M., Chen, Haoqing, Liu, Yuanyuan, Van Treuren, William, Higginbottom, Steven K., Jarman, John B., Fischer, Curt R., Mak, Justin, Wong, Beverly, Cowan, Tina M., Fischbach, Michael A., Sonnenburg, Justin L., Dodd, Dylan
Published in Nature communications (31.01.2023)
Published in Nature communications (31.01.2023)
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Journal Article
The emerging metabolic view of Clostridium difficile pathogenesis
Hryckowian, Andrew J, Pruss, Kali M, Sonnenburg, Justin L
Published in Current opinion in microbiology (01.02.2017)
Published in Current opinion in microbiology (01.02.2017)
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Journal Article
Recovery of the Gut Microbiota after Antibiotics Depends on Host Diet, Community Context, and Environmental Reservoirs
Ng, Katharine Michelle, Aranda-Díaz, Andrés, Tropini, Carolina, Frankel, Matthew Ryan, Van Treuren, William, O’Loughlin, Colleen T., Merrill, Bryan Douglas, Yu, Feiqiao Brian, Pruss, Kali M., Oliveira, Rita Almeida, Higginbottom, Steven Kyle, Neff, Norma F., Fischbach, Michael Andrew, Xavier, Karina Bivar, Sonnenburg, Justin Laine, Huang, Kerwyn Casey
Published in Cell host & microbe (07.10.2020)
Published in Cell host & microbe (07.10.2020)
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Journal Article
Prevotella copri and microbiota members mediate the beneficial effects of a therapeutic food for malnutrition
Chang, Hao-Wei, Lee, Evan M., Wang, Yi, Zhou, Cyrus, Pruss, Kali M., Henrissat, Suzanne, Chen, Robert Y., Kao, Clara, Hibberd, Matthew C., Lynn, Hannah M., Webber, Daniel M., Crane, Marie, Cheng, Jiye, Rodionov, Dmitry A., Arzamasov, Aleksandr A., Castillo, Juan J., Couture, Garret, Chen, Ye, Balcazo, Nikita P., Lebrilla, Carlito B., Terrapon, Nicolas, Henrissat, Bernard, Ilkayeva, Olga, Muehlbauer, Michael J., Newgard, Christopher B., Mostafa, Ishita, Das, Subhasish, Mahfuz, Mustafa, Osterman, Andrei L., Barratt, Michael J., Ahmed, Tahmeed, Gordon, Jeffrey I.
Published in Nature microbiology (01.04.2024)
Published in Nature microbiology (01.04.2024)
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Journal Article
Oxidative ornithine metabolism supports non-inflammatory C. difficile colonization
Pruss, Kali M., Enam, Fatima, Battaglioli, Eric, DeFeo, Mary, Diaz, Oscar R., Higginbottom, Steven K., Fischer, Curt R., Hryckowian, Andrew J., Van Treuren, William, Dodd, Dylan, Kashyap, Purna, Sonnenburg, Justin L.
Published in Nature metabolism (01.01.2022)
Published in Nature metabolism (01.01.2022)
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Journal Article
A Gut Commensal-Produced Metabolite Mediates Colonization Resistance to Salmonella Infection
Jacobson, Amanda, Lam, Lilian, Rajendram, Manohary, Tamburini, Fiona, Honeycutt, Jared, Pham, Trung, Van Treuren, Will, Pruss, Kali, Stabler, Stephen Russell, Lugo, Kyler, Bouley, Donna M., Vilches-Moure, Jose G., Smith, Mark, Sonnenburg, Justin L., Bhatt, Ami S., Huang, Kerwyn Casey, Monack, Denise
Published in Cell host & microbe (08.08.2018)
Published in Cell host & microbe (08.08.2018)
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Journal Article
Prevotella copri -related effects of a therapeutic food for malnutrition
Chang, Hao-Wei, Lee, Evan M, Wang, Yi, Zhou, Cyrus, Pruss, Kali M, Henrissat, Suzanne, Chen, Robert Y, Kao, Clara, Hibberd, Matthew C, Lynn, Hannah M, Webber, Daniel M, Crane, Marie, Cheng, Jiye, Rodionov, Dmitry A, Arzamasov, Aleksandr A, Castillo, Juan J, Couture, Garret, Chen, Ye, Balcazo, Nikita P, Lebrilla, Carlito B, Terrapon, Nicolas, Henrissat, Bernard, Ilkayeva, Olga, Muehlbauer, Michael J, Newgard, Christopher B, Mostafa, Ishita, Das, Subhasish, Mahfuz, Mustafa, Osterman, Andrei L, Barratt, Michael J, Ahmed, Tahmeed, Gordon, Jeffrey I
Published in bioRxiv : the preprint server for biology (20.12.2023)
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Published in bioRxiv : the preprint server for biology (20.12.2023)
Journal Article
Prevotella copri-related effects of a therapeutic food for malnutrition
Hao-Wei, Chang, Lee, Evan M, Wang, Yi, Zhou, Cyrus, Pruss, Kali M, Henrissat, Suzanne, Chen, Robert Y, Kao, Clara, Hibberd, Matthew C, Lynn, Hannah M, Webber, Daniel M, Crane, Marie, Cheng, Jiye, Rodionov, Dmitry A, Arzamasov, Aleksandr A, Castillo, Juan J, Couture, Garret, Chen, Ye, Balcazo, Nikita P, Lebrilla, Carlito B, Terrapon, Nicolas, Henrissat, Bernard, Ilkayeva, Olga, Muehlbauer, Michael J, Newgard, Christopher, Mostafa, Ishita, Das, Subhasish, Mahfuz, Mustafa, Osterman, Andrei, Barratt, Michael J, Tahmeed Ahmed, Gordon, Jeffrey
Published in bioRxiv (20.12.2023)
Published in bioRxiv (20.12.2023)
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Paper
Mucin-derived O-glycans supplemented to diet mitigate diverse microbiota perturbations
Pruss, Kali M, Marcobal, Angela, Southwick, Audrey, Dahan, Dylan, Smits, Sam, Ferreyra, Jessica, Higginbottom, Steven, Sonnenburg, Erica, Kashyap, Purna, Choudhury, Biswa, Bode, Lars, Sonnenburg, Justin
Published in bioRxiv (11.06.2020)
Published in bioRxiv (11.06.2020)
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Paper
Recovery of the gut microbiota after antibiotics depends on host diet and environmental reservoirs
Ng, Katharine M, Aranda-Diaz, Andres, Tropini, Carolina, Matthew Ryan Frankel, Van Treuren, William W, O'laughlin, Colleen, Merrill, Bryan D, Feiqiao, Brian Yu, Pruss, Kali M, Rita Almeida Oliveira, Higginbottom, Steven K, Neff, Norma F, Fischbach, Michael A, Xavier, Karina B, Sonnenburg, Justin L, Kerwyn Casey Huang
Published in bioRxiv (08.08.2019)
Published in bioRxiv (08.08.2019)
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