Pdgfra marks a cellular lineage with distinct contributions to myofibroblasts in lung maturation and injury response
Li, Rongbo, Bernau, Ksenija, Sandbo, Nathan, Gu, Jing, Preissl, Sebastian, Sun, Xin
Published in eLife (04.09.2018)
Published in eLife (04.09.2018)
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Journal Article
A single-cell atlas of chromatin accessibility in the human genome
Zhang, Kai, Hocker, James D., Miller, Michael, Hou, Xiaomeng, Chiou, Joshua, Poirion, Olivier B., Qiu, Yunjiang, Li, Yang E., Gaulton, Kyle J., Wang, Allen, Preissl, Sebastian, Ren, Bing
Published in Cell (24.11.2021)
Published in Cell (24.11.2021)
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Journal Article
Complex Oscillatory Waves Emerging from Cortical Organoids Model Early Human Brain Network Development
Trujillo, Cleber A., Gao, Richard, Negraes, Priscilla D., Gu, Jing, Buchanan, Justin, Preissl, Sebastian, Wang, Allen, Wu, Wei, Haddad, Gabriel G., Chaim, Isaac A., Domissy, Alain, Vandenberghe, Matthieu, Devor, Anna, Yeo, Gene W., Voytek, Bradley, Muotri, Alysson R.
Published in Cell stem cell (03.10.2019)
Published in Cell stem cell (03.10.2019)
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Journal Article
Comprehensive analysis of single cell ATAC-seq data with SnapATAC
Fang, Rongxin, Preissl, Sebastian, Li, Yang, Hou, Xiaomeng, Lucero, Jacinta, Wang, Xinxin, Motamedi, Amir, Shiau, Andrew K, Zhou, Xinzhu, Xie, Fangming, Mukamel, Eran A, Zhang, Kai, Zhang, Yanxiao, Behrens, M Margarita, Ecker, Joseph R, Ren, Bing
Published in Nature communications (26.02.2021)
Published in Nature communications (26.02.2021)
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Journal Article
Iterative single-cell multi-omic integration using online learning
Gao, Chao, Liu, Jialin, Kriebel, April R, Preissl, Sebastian, Luo, Chongyuan, Castanon, Rosa, Sandoval, Justin, Rivkin, Angeline, Nery, Joseph R, Behrens, Margarita M, Ecker, Joseph R, Ren, Bing, Welch, Joshua D
Published in Nature biotechnology (01.08.2021)
Published in Nature biotechnology (01.08.2021)
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Journal Article
Single-nucleus analysis of accessible chromatin in developing mouse forebrain reveals cell-type-specific transcriptional regulation
Preissl, Sebastian, Fang, Rongxin, Huang, Hui, Zhao, Yuan, Raviram, Ramya, Gorkin, David U, Zhang, Yanxiao, Sos, Brandon C, Afzal, Veena, Dickel, Diane E, Kuan, Samantha, Visel, Axel, Pennacchio, Len A, Zhang, Kun, Ren, Bing
Published in Nature neuroscience (01.03.2018)
Published in Nature neuroscience (01.03.2018)
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Journal Article
Broad histone H3K4me3 domains in mouse oocytes modulate maternal-to-zygotic transition
Dahl, John Arne, Jung, Inkyung, Aanes, Håvard, Greggains, Gareth D, Manaf, Adeel, Lerdrup, Mads, Li, Guoqiang, Kuan, Samantha, Li, Bin, Lee, Ah Young, Preissl, Sebastian, Jermstad, Ingunn, Haugen, Mads Haugland, Suganthan, Rajikala, Bjørås, Magnar, Hansen, Klaus, Dalen, Knut Tomas, Fedorcsak, Peter, Ren, Bing, Klungland, Arne
Published in Nature (London) (22.09.2016)
Published in Nature (London) (22.09.2016)
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Journal Article
Transcriptionally active HERV-H retrotransposons demarcate topologically associating domains in human pluripotent stem cells
Zhang, Yanxiao, Li, Ting, Preissl, Sebastian, Amaral, Maria Luisa, Grinstein, Jonathan D, Farah, Elie N, Destici, Eugin, Qiu, Yunjiang, Hu, Rong, Lee, Ah Young, Chee, Sora, Ma, Kaiyue, Ye, Zhen, Zhu, Quan, Huang, Hui, Fang, Rongxin, Yu, Leqian, Izpisua Belmonte, Juan Carlos, Wu, Jun, Evans, Sylvia M, Chi, Neil C, Ren, Bing
Published in Nature genetics (01.09.2019)
Published in Nature genetics (01.09.2019)
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Journal Article
Single-cell chromatin accessibility identifies pancreatic islet cell type- and state-specific regulatory programs of diabetes risk
Chiou, Joshua, Zeng, Chun, Cheng, Zhang, Han, Jee Yun, Schlichting, Michael, Miller, Michael, Mendez, Robert, Huang, Serina, Wang, Jinzhao, Sui, Yinghui, Deogaygay, Allison, Okino, Mei-Lin, Qiu, Yunjiang, Sun, Ying, Kudtarkar, Parul, Fang, Rongxin, Preissl, Sebastian, Sander, Maike, Gorkin, David U, Gaulton, Kyle J
Published in Nature genetics (01.04.2021)
Published in Nature genetics (01.04.2021)
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Journal Article
Distinct epigenetic programs regulate cardiac myocyte development and disease in the human heart in vivo
Gilsbach, Ralf, Schwaderer, Martin, Preissl, Sebastian, Grüning, Björn A, Kranzhöfer, David, Schneider, Pedro, Nührenberg, Thomas G, Mulero-Navarro, Sonia, Weichenhan, Dieter, Braun, Christian, Dreßen, Martina, Jacobs, Adam R, Lahm, Harald, Doenst, Torsten, Backofen, Rolf, Krane, Markus, Gelb, Bruce D, Hein, Lutz
Published in Nature communications (26.01.2018)
Published in Nature communications (26.01.2018)
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Journal Article
Dynamic DNA methylation orchestrates cardiomyocyte development, maturation and disease
Gilsbach, Ralf, Preissl, Sebastian, Grüning, Björn A, Schnick, Tilman, Burger, Lukas, Benes, Vladimir, Würch, Andreas, Bönisch, Ulrike, Günther, Stefan, Backofen, Rolf, Fleischmann, Bernd K, Schübeler, Dirk, Hein, Lutz
Published in Nature communications (22.10.2014)
Published in Nature communications (22.10.2014)
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Journal Article
Single-cell chromatin accessibility maps reveal regulatory programs driving early mouse organogenesis
Pijuan-Sala, Blanca, Wilson, Nicola K, Xia, Jun, Hou, Xiaomeng, Hannah, Rebecca L, Kinston, Sarah, Calero-Nieto, Fernando J, Poirion, Olivier, Preissl, Sebastian, Liu, Feng, Göttgens, Berthold
Published in Nature cell biology (01.04.2020)
Published in Nature cell biology (01.04.2020)
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Journal Article
Single-cell multiomic profiling of human lungs reveals cell-type-specific and age-dynamic control of SARS-CoV2 host genes
Wang, Allen, Chiou, Joshua, Poirion, Olivier B, Buchanan, Justin, Valdez, Michael J, Verheyden, Jamie M, Hou, Xiaomeng, Kudtarkar, Parul, Narendra, Sharvari, Newsome, Jacklyn M, Guo, Minzhe, Faddah, Dina A, Zhang, Kai, Young, Randee E, Barr, Justinn, Sajti, Eniko, Misra, Ravi, Huyck, Heidie, Rogers, Lisa, Poole, Cory, Whitsett, Jeffery A, Pryhuber, Gloria, Xu, Yan, Gaulton, Kyle J, Preissl, Sebastian, Sun, Xin
Published in eLife (09.11.2020)
Published in eLife (09.11.2020)
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Journal Article
Histone H3 lysine 4 monomethylation modulates long- range chromatin interactions at enhancers
Yan, Jian, Chen, Shi-An A, Local, Andrea, Liu, Tristin, Qiu, Yunjiang, Dorighi, Kristel M, Preissl, Sebastian, Rivera, Chloe M, Wang, Chaochen, Ye, Zhen, Ge, Kai, Hu, Ming, Wysocka, Joanna, Ren, Bing
Published in Cell research (01.02.2018)
Published in Cell research (01.02.2018)
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Journal Article
Single-Cell Chromatin Analysis of Mammary Gland Development Reveals Cell-State Transcriptional Regulators and Lineage Relationships
Chung, Chi-Yeh, Ma, Zhibo, Dravis, Christopher, Preissl, Sebastian, Poirion, Olivier, Luna, Gidsela, Hou, Xiaomeng, Giraddi, Rajshekhar R., Ren, Bing, Wahl, Geoffrey M.
Published in Cell reports (Cambridge) (08.10.2019)
Published in Cell reports (Cambridge) (08.10.2019)
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Journal Article
DNA methylation signatures follow preformed chromatin compartments in cardiac myocytes
Nothjunge, Stephan, Nührenberg, Thomas G, Grüning, Björn A, Doppler, Stefanie A, Preissl, Sebastian, Schwaderer, Martin, Rommel, Carolin, Krane, Markus, Hein, Lutz, Gilsbach, Ralf
Published in Nature communications (21.11.2017)
Published in Nature communications (21.11.2017)
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Journal Article
Preclinical Development of a MicroRNA-Based Therapy for Elderly Patients With Myocardial Infarction
Gupta, Shashi Kumar, PhD, Foinquinos, Ariana, MSc, Thum, Sabrina, Remke, Janet, Zimmer, Karina, Bauters, Christophe, MD, de Groote, Pascal, MD, Boon, Reinier A., PhD, de Windt, Leon J., PhD, Preissl, Sebastian, PhD, Hein, Lutz, MD, Batkai, Sandor, MD, PhD, Pinet, Florence, PhD, Thum, Thomas, MD, PhD
Published in Journal of the American College of Cardiology (04.10.2016)
Published in Journal of the American College of Cardiology (04.10.2016)
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Journal Article
Cardiac Myocyte De Novo DNA Methyltransferases 3a/3b Are Dispensable for Cardiac Function and Remodeling after Chronic Pressure Overload in Mice
Nührenberg, Thomas G, Hammann, Nils, Schnick, Tilman, Preißl, Sebastian, Witten, Anika, Stoll, Monika, Gilsbach, Ralf, Neumann, Franz-Josef, Hein, Lutz
Published in PloS one (22.06.2015)
Published in PloS one (22.06.2015)
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Journal Article
Catecholamine treatment induces reversible heart injury and cardiomyocyte gene expression
Bode, Christine, Preissl, Sebastian, Hein, Lutz, Lother, Achim
Published in Intensive care medicine experimental (11.05.2024)
Published in Intensive care medicine experimental (11.05.2024)
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Journal Article
Mapping genetic effects on cell type-specific chromatin accessibility and annotating complex immune trait variants using single nucleus ATAC-seq in peripheral blood
Benaglio, Paola, Newsome, Jacklyn, Han, Jee Yun, Chiou, Joshua, Aylward, Anthony, Corban, Sierra, Miller, Michael, Okino, Mei-Lin, Kaur, Jaspreet, Preissl, Sebastian, Gorkin, David U, Gaulton, Kyle J
Published in PLoS genetics (08.06.2023)
Published in PLoS genetics (08.06.2023)
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