Linking genetic markers and crop model parameters using neural networks to enhance genomic prediction of integrative traits
Larue, Florian, Rouan, Lauriane, Pot, David, Rami, Jean-François, Luquet, Delphine, Beurier, Grégory
Published in Frontiers in plant science (30.07.2024)
Published in Frontiers in plant science (30.07.2024)
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Transcriptome Analysis of Leaves, Flowers and Fruits Perisperm of Coffea arabica L. Reveals the Differential Expression of Genes Involved in Raffinose Biosynthesis
Ivamoto, Suzana Tiemi, Reis, Júnior, Osvaldo, Domingues, Douglas Silva, Dos Santos, Tiago Benedito, de Oliveira, Fernanda Freitas, Pot, David, Leroy, Thierry, Vieira, Luiz Gonzaga Esteves, Carazzolle, Marcelo Falsarella, Pereira, Gonçalo Amarante Guimarães, Pereira, Luiz Filipe Protasio
Published in PloS one (09.01.2017)
Published in PloS one (09.01.2017)
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Plasticity of Sorghum Stem Biomass Accumulation in Response to Water Deficit: A Multiscale Analysis from Internode Tissue to Plant Level
Perrier, Lisa, Rouan, Lauriane, Jaffuel, Sylvie, Clément-Vidal, Anne, Roques, Sandrine, Soutiras, Armelle, Baptiste, Christelle, Bastianelli, Denis, Fabre, Denis, Dubois, Cécile, Pot, David, Luquet, Delphine
Published in Frontiers in plant science (01.09.2017)
Published in Frontiers in plant science (01.09.2017)
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Journal Article
Genetic structure, linkage disequilibrium and signature of selection in Sorghum: lessons from physically anchored DArT markers
Bouchet, Sophie, Pot, David, Deu, Monique, Rami, Jean-François, Billot, Claire, Perrier, Xavier, Rivallan, Ronan, Gardes, Laëtitia, Xia, Ling, Wenzl, Peter, Kilian, Andrzej, Glaszmann, Jean-Christophe
Published in PloS one (13.03.2012)
Published in PloS one (13.03.2012)
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Transcriptional Regulation of Sorghum Stem Composition: Key Players Identified Through Co-expression Gene Network and Comparative Genomics Analyses
Hennet, Lauriane, Berger, Angélique, Trabanco, Noemi, Ricciuti, Emeline, Dufayard, Jean-François, Bocs, Stéphanie, Bastianelli, Denis, Bonnal, Laurent, Roques, Sandrine, Rossini, Laura, Luquet, Delphine, Terrier, Nancy, Pot, David
Published in Frontiers in plant science (03.03.2020)
Published in Frontiers in plant science (03.03.2020)
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Evolutionary forces affecting synonymous variations in plant genomes
Clément, Yves, Sarah, Gautier, Holtz, Yan, Homa, Felix, Pointet, Stéphanie, Contreras, Sandy, Nabholz, Benoit, Sabot, François, Sauné, Laure, Ardisson, Morgane, Bacilieri, Roberto, Besnard, Guillaume, Berger, Angélique, Cardi, Céline, De Bellis, Fabien, Fouet, Olivier, Jourda, Cyril, Khadari, Bouchaib, Lanaud, Claire, Leroy, Thierry, Pot, David, Sauvage, Christopher, Scarcelli, Nora, Tregear, James, Vigouroux, Yves, Yahiaoui, Nabila, Ruiz, Manuel, Santoni, Sylvain, Labouisse, Jean-Pierre, Pham, Jean-Louis, David, Jacques, Glémin, Sylvain
Published in PLoS genetics (22.05.2017)
Published in PLoS genetics (22.05.2017)
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Mobilizing sorghum genetic diversity: Biochemical and histological‐assisted design of a stem ideotype for biomethane production
Thomas, Hélène Laurence, Pot, David, Jaffuel, Sylvie, Verdeil, Jean‐Luc, Baptiste, Christelle, Bonnal, Laurent, Trouche, Gilles, Bastianelli, Denis, Latrille, Eric, Berger, Angélique, Calatayud, Caroline, Chauvergne, Céline, Rossard, Virginie, Jeanson, Patrice, Alcouffe, Joël, Carrère, Hélène
Published in Global change biology. Bioenergy (01.12.2021)
Published in Global change biology. Bioenergy (01.12.2021)
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SL-Cloud: A Cloud-based resource to support synthetic lethal interaction discovery [version 1; peer review: 1 approved, 1 approved with reservations]
Tercan, Bahar, Qin, Guangrong, Kim, Taek-Kyun, Aguilar, Boris, Phan, John, Longabaugh, William, Pot, David, Kemp, Christopher J., Chambwe, Nyasha, Shmulevich, Ilya
Published in F1000 research (2022)
Published in F1000 research (2022)
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Journal Article
Genotypic covariations of traits underlying sorghum stem biomass production and quality and their regulations by water availability: Insight from studies at organ and tissue levels
Luquet, Delphine, Perrier, Lisa, Clément‐Vidal, Anne, Jaffuel, Sylvie, Verdeil, Jean‐Luc, Roques, Sandrine, Soutiras, Armelle, Baptiste, Christelle, Fabre, Denis, Bastianelli, Denis, Bonnal, Laurent, Sartre, Pascal, Rouan, Lauriane, Pot, David
Published in Global change biology. Bioenergy (01.02.2019)
Published in Global change biology. Bioenergy (01.02.2019)
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Journal Article
An initial assessment of linkage disequilibrium (LD) in coffee trees: LD patterns in groups of Coffea canephora Pierre using microsatellite analysis
Cubry, Philippe, de Bellis, Fabien, Avia, Komlan, Bouchet, Sophie, Pot, David, Dufour, Magali, Legnate, Hyacinthe, Leroy, Thierry
Published in BMC genomics (16.01.2013)
Published in BMC genomics (16.01.2013)
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RBCS1 expression in coffee: Coffea orthologs, Coffea arabica homeologs, and expression variability between genotypes and under drought stress
Marraccini, Pierre, Freire, Luciana P, Alves, Gabriel S C, Vieira, Natalia G, Vinecky, Felipe, Elbelt, Sonia, Ramos, Humberto J O, Montagnon, Christophe, Vieira, Luiz G E, Leroy, Thierry, Pot, David, Silva, Vânia A, Rodrigues, Gustavo C, Andrade, Alan C
Published in BMC plant biology (16.05.2011)
Published in BMC plant biology (16.05.2011)
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Flavor precursors and sensory attributes of coffee submitted to different post-harvest processing
Sorane Good Kitzberger, Cíntia, Pot, David, Marraccini, Pierre, Filipe Protasio Pereira, Luiz, Brígida dos Santos Scholz, Maria
Published in AIMS agriculture and food (01.01.2020)
Published in AIMS agriculture and food (01.01.2020)
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The 'PUCE CAFE' Project: the first 15K coffee microarray, a new tool for discovering candidate genes correlated to agronomic and quality traits
Privat, Isabelle, Bardil, Amélie, Gomez, Aureliano Bombarely, Severac, Dany, Dantec, Christelle, Fuentes, Ivanna, Mueller, Lukas, Joët, Thierry, Pot, David, Foucrier, Séverine, Dussert, Stéphane, Leroy, Thierry, Journot, Laurent, de Kochko, Alexandre, Campa, Claudine, Combes, Marie-Christine, Lashermes, Philippe, Bertrand, Benoit
Published in BMC genomics (05.01.2011)
Published in BMC genomics (05.01.2011)
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Text-mining of PubMed abstracts by natural language processing to create a public knowledge base on molecular mechanisms of bacterial enteropathogens
Zaremba, Sam, Ramos-Santacruz, Mila, Hampton, Thomas, Shetty, Panna, Fedorko, Joel, Whitmore, Jon, Greene, John M, Perna, Nicole T, Glasner, Jeremy D, Plunkett, 3rd, Guy, Shaker, Matthew, Pot, David
Published in BMC bioinformatics (10.06.2009)
Published in BMC bioinformatics (10.06.2009)
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Journal Article
Automated SNP detection in expressed sequence tags: statistical considerations and application to maritime pine sequences
Dantec, Loïck Le, Chagné, David, Pot, David, Cantin, Olivier, Garnier-Géré, Pauline, Bedon, Frank, Frigerio, Jean-Marc, Chaumeil, Philippe, Léger, Patrick, Garcia, Virginie, Laigret, Frédéric, De Daruvar, Antoine, Plomion, Christophe
Published in Plant molecular biology (01.02.2004)
Published in Plant molecular biology (01.02.2004)
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Journal Article
QTLs and candidate genes for wood properties in maritime pine (Pinus pinaster Ait.)
Pot, David, Rodrigues, Jose-Carlos, Rozenberg, Philippe, Chantre, Guillaume, Tibbits, Josquin, Cahalan, Christine, Pichavant, Frédérique, Plomion, Christophe
Published in Tree genetics & genomes (01.02.2006)
Published in Tree genetics & genomes (01.02.2006)
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Journal Article
Characterization of a New Member of the TNF Family Expressed on Antigen Presenting Cells
Tribouley, Catherine, Wallroth, Marco, Chan, Vivien, Paliard, Xavier, Fang, Eric, Lamson, George, Pot, David, Escobedo, Jaime, Williams, Lewis T.
Published in Biological chemistry (01.12.1999)
Published in Biological chemistry (01.12.1999)
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