Plant_SNP_TATA_Z-Tester: A Web Service That Unequivocally Estimates the Impact of Proximal Promoter Mutations on Plant Gene Expression
Rasskazov, Dmitry, Chadaeva, Irina, Sharypova, Ekaterina, Zolotareva, Karina, Khandaev, Bato, Ponomarenko, Petr, Podkolodnyy, Nikolay, Tverdokhleb, Natalya, Vishnevsky, Oleg, Bogomolov, Anton, Podkolodnaya, Olga, Savinkova, Ludmila, Zemlyanskaya, Elena, Golubyatnikov, Vadimir, Kolchanov, Nikolay, Ponomarenko, Mikhail
Published in International journal of molecular sciences (04.08.2022)
Published in International journal of molecular sciences (04.08.2022)
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Journal Article
AtSNP_TATAdb: Candidate Molecular Markers of Plant Advantages Related to Single Nucleotide Polymorphisms within Proximal Promoters of Arabidopsis thaliana L
Bogomolov, Anton, Zolotareva, Karina, Filonov, Sergey, Chadaeva, Irina, Rasskazov, Dmitry, Sharypova, Ekaterina, Podkolodnyy, Nikolay, Ponomarenko, Petr, Savinkova, Ludmila, Tverdokhleb, Natalya, Khandaev, Bato, Kondratyuk, Ekaterina, Podkolodnaya, Olga, Zemlyanskaya, Elena, Kolchanov, Nikolay A, Ponomarenko, Mikhail
Published in International journal of molecular sciences (03.01.2024)
Published in International journal of molecular sciences (03.01.2024)
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Journal Article
Candidate SNP Markers Significantly Altering the Affinity of TATA-Binding Protein for the Promoters of Human Hub Genes for Atherogenesis, Atherosclerosis and Atheroprotection
Bogomolov, Anton, Filonov, Sergey, Chadaeva, Irina, Rasskazov, Dmitry, Khandaev, Bato, Zolotareva, Karina, Kazachek, Anna, Oshchepkov, Dmitry, Ivanisenko, Vladimir A, Demenkov, Pavel, Podkolodnyy, Nikolay, Kondratyuk, Ekaterina, Ponomarenko, Petr, Podkolodnaya, Olga, Mustafin, Zakhar, Savinkova, Ludmila, Kolchanov, Nikolay, Tverdokhleb, Natalya, Ponomarenko, Mikhail
Published in International journal of molecular sciences (19.05.2023)
Published in International journal of molecular sciences (19.05.2023)
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Journal Article
Computational modeling of the cell-autonomous mammalian circadian oscillator
Podkolodnaya, Olga A, Tverdokhleb, Natalya N, Podkolodnyy, Nikolay L
Published in BMC systems biology (24.02.2017)
Published in BMC systems biology (24.02.2017)
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Journal Article
Unannotated single nucleotide polymorphisms in the TATA box of erythropoiesis genes show in vitro positive involvements in cognitive and mental disorders
Ponomarenko, Mikhail, Sharypova, Ekaterina, Drachkova, Irina, Chadaeva, Irina, Arkova, Olga, Podkolodnaya, Olga, Ponomarenko, Petr, Kolchanov, Nikolay, Savinkova, Ludmila
Published in BMC medical genetics (22.10.2020)
Published in BMC medical genetics (22.10.2020)
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Journal Article
Nucleosome formation potential of eukaryotic DNA: calculation and promoters analysis
Levitsky, Victor G., Podkolodnaya, Olga A., Kolchanov, Nikolay A., Podkolodny, Nikolay L.
Published in Bioinformatics (01.11.2001)
Published in Bioinformatics (01.11.2001)
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Journal Article
NPRD: Nucleosome Positioning Region Database
Levitsky, Victor G., Katokhin, Aleksey V., Podkolodnaya, Olga A., Furman, Dagmara P., Kolchanov, Nikolay A.
Published in Nucleic acids research (01.01.2005)
Published in Nucleic acids research (01.01.2005)
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Journal Article
A single ChIP-seq dataset is sufficient for comprehensive analysis of motifs co-occurrence with MCOT package
Levitsky, Victor, Zemlyanskaya, Elena, Oshchepkov, Dmitry, Podkolodnaya, Olga, Ignatieva, Elena, Grosse, Ivo, Mironova, Victoria, Merkulova, Tatyana
Published in Nucleic acids research (02.12.2019)
Published in Nucleic acids research (02.12.2019)
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Journal Article
Nucleosome formation potential of exons, introns, and Alu repeats
Levitsky, Victor G., Podkolodnaya, Olga A., Kolchanov, Nikolay A., Podkolodny, Nikolay L.
Published in Bioinformatics (01.11.2001)
Published in Bioinformatics (01.11.2001)
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Journal Article
Oligonucleotide frequency matrices addressed to recognizing functional DNA sites
Ponomarenko, M P, Ponomarenko, J V, Frolov, A S, Podkolodnaya, O A, Vorobyev, D G, Kolchanov, N A, Overton, G C
Published in Bioinformatics (Oxford, England) (01.07.1999)
Published in Bioinformatics (Oxford, England) (01.07.1999)
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Journal Article
AtSNP_TATAdb: Candidate Molecular Markers of Plant Advantages Related to Single Nucleotide Polymorphisms within Proximal Promoters of IArabidopsis thaliana/I L
Bogomolov, Anton, Zolotareva, Karina, Filonov, Sergey, Chadaeva, Irina, Rasskazov, Dmitry, Sharypova, Ekaterina, Podkolodnyy, Nikolay, Ponomarenko, Petr, Savinkova, Ludmila, Tverdokhleb, Natalya, Khandaev, Bato, Kondratyuk, Ekaterina, Podkolodnaya, Olga, Zemlyanskaya, Elena, Kolchanov, Nikolay A, Ponomarenko, Mikhail
Published in International journal of molecular sciences (01.01.2024)
Published in International journal of molecular sciences (01.01.2024)
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Journal Article
GeneNet Database: Description and Modeling of Gene Networks
Kolchanov, Nikolay A., Nedosekina, Eugenia A., Ananko, Elena A., Likhoshvai, Vitaly A., Podkolodny, Nikolay L., Ratushny, Alexander V., Stepanenko, Irina L., Podkolodnaya, Olga A., Ignatieva, Elena V., Matushkin, Yury G.
Published in In silico biology (2002)
Published in In silico biology (2002)
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Journal Article
Candidate SNP Markers of Chronopathologies Are Predicted by a Significant Change in the Affinity of TATA-Binding Protein for Human Gene Promoters
Ponomarenko, Mikhail, Kolchanov, Nikolay, Chadaeva, Irina, Podkolodny, Nikolay L., Podkolodnaya, Olga, Savinkova, Ludmila, Sharypova, Ekaterina, Suslov, Valentin, Rasskazov, Dmitry, Ponomarenko, M. P., Tverdokhleb, Natalya N.
Published in BioMed research international (01.01.2016)
Published in BioMed research international (01.01.2016)
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Journal Article
Computational modeling of the cell-autonomous mammalian circadian oscillator
Podkolodnaya, Olga A., Tverdokhleb, Natalya N., Podkolodnyy, Nikolay L.
Published in BMC systems biology (24.02.2017)
Published in BMC systems biology (24.02.2017)
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Journal Article
Nucleosome formation potential of exons, introns, and Alu repeats
LEVITSKY, Victor G, PODKOLODNAYA, Olga A, KOLCHANOV, Nikolay A, PODKOLODNY, Nikolay L
Published in Bioinformatics (Oxford. Print) (2001)
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Published in Bioinformatics (Oxford. Print) (2001)
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