Ultrastructural visualization of 3D chromatin folding using volume electron microscopy and DNA in situ hybridization
Trzaskoma, Paweł, Ruszczycki, Błażej, Lee, Byoungkoo, Pels, Katarzyna K, Krawczyk, Katarzyna, Bokota, Grzegorz, Szczepankiewicz, Andrzej A, Aaron, Jesse, Walczak, Agnieszka, Śliwińska, Małgorzata A, Magalska, Adriana, Kadlof, Michal, Wolny, Artur, Parteka, Zofia, Arabasz, Sebastian, Kiss-Arabasz, Magdalena, Plewczyński, Dariusz, Ruan, Yijun, Wilczyński, Grzegorz M
Published in Nature communications (01.05.2020)
Published in Nature communications (01.05.2020)
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CTCF-Mediated Human 3D Genome Architecture Reveals Chromatin Topology for Transcription
Tang, Zhonghui, Luo, Oscar Junhong, Li, Xingwang, Zheng, Meizhen, Zhu, Jacqueline Jufen, Szalaj, Przemyslaw, Trzaskoma, Pawel, Magalska, Adriana, Wlodarczyk, Jakub, Ruszczycki, Blazej, Michalski, Paul, Piecuch, Emaly, Wang, Ping, Wang, Danjuan, Tian, Simon Zhongyuan, Penrad-Mobayed, May, Sachs, Laurent M., Ruan, Xiaoan, Wei, Chia-Lin, Liu, Edison T., Wilczynski, Grzegorz M., Plewczynski, Dariusz, Li, Guoliang, Ruan, Yijun
Published in Cell (17.12.2015)
Published in Cell (17.12.2015)
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Spatial chromatin architecture alteration by structural variations in human genomes at the population scale
Sadowski, Michal, Kraft, Agnieszka, Szalaj, Przemyslaw, Wlasnowolski, Michal, Tang, Zhonghui, Ruan, Yijun, Plewczynski, Dariusz
Published in Genome Biology (30.07.2019)
Published in Genome Biology (30.07.2019)
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Editorial: Unveiling novel aspects of SARS-CoV-2 to combat COVID-19
Ghosh, Nimisha, Saha, Indrajit, Plewczynski, Dariusz
Published in Frontiers in genetics (21.02.2024)
Published in Frontiers in genetics (21.02.2024)
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COVID-DeepPredictor: Recurrent Neural Network to Predict SARS-CoV-2 and Other Pathogenic Viruses
Saha, Indrajit, Ghosh, Nimisha, Maity, Debasree, Seal, Arjit, Plewczynski, Dariusz
Published in Frontiers in genetics (11.02.2021)
Published in Frontiers in genetics (11.02.2021)
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The 3D enhancer network of the developing T cell genome is shaped by SATB1
Zelenka, Tomas, Klonizakis, Antonios, Tsoukatou, Despina, Papamatheakis, Dionysios-Alexandros, Franzenburg, Sören, Tzerpos, Petros, Tzonevrakis, Ioannis-Rafail, Papadogkonas, George, Kapsetaki, Manouela, Nikolaou, Christoforos, Plewczynski, Dariusz, Spilianakis, Charalampos
Published in Nature communications (14.11.2022)
Published in Nature communications (14.11.2022)
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Editorial: SARS-CoV-2: From Genetic Variability to Vaccine Design
Saha, Indrajit, Ghosh, Nimisha, Plewczynski, Dariusz
Published in Frontiers in genetics (26.08.2022)
Published in Frontiers in genetics (26.08.2022)
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TBC1D24 emerges as an important contributor to progressive postlingual dominant hearing loss
Oziębło, Dominika, Leja, Marcin L, Lazniewski, Michal, Sarosiak, Anna, Tacikowska, Grażyna, Kochanek, Krzysztof, Plewczynski, Dariusz, Skarżyński, Henryk, Ołdak, Monika
Published in Scientific reports (13.05.2021)
Published in Scientific reports (13.05.2021)
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Structural Variants and Implicated Processes Associated with Familial Tourette Syndrome
Fichna, Jakub P, Chiliński, Mateusz, Halder, Anup Kumar, Cięszczyk, Paweł, Plewczynski, Dariusz, Żekanowski, Cezary, Janik, Piotr
Published in International journal of molecular sciences (01.06.2024)
Published in International journal of molecular sciences (01.06.2024)
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PartSeg: a tool for quantitative feature extraction from 3D microscopy images for dummies
Bokota, Grzegorz, Sroka, Jacek, Basu, Subhadip, Das, Nirmal, Trzaskoma, Pawel, Yushkevich, Yana, Grabowska, Agnieszka, Magalska, Adriana, Plewczynski, Dariusz
Published in BMC bioinformatics (17.02.2021)
Published in BMC bioinformatics (17.02.2021)
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Dendritic Spines Taxonomy: The Functional and Structural Classification • Time-Dependent Probabilistic Model of Neuronal Activation
Urban, Paulina, Rezaei, Vahid, Bokota, Grzegorz, Denkiewicz, Michał, Basu, Subhadip, Plewczyński, Dariusz
Published in Journal of computational biology (01.04.2019)
Published in Journal of computational biology (01.04.2019)
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Super-resolution visualization of chromatin loop folding in human lymphoblastoid cells using interferometric photoactivated localization microscopy
Parteka-Tojek, Zofia, Zhu, Jacqueline Jufen, Lee, Byoungkoo, Jodkowska, Karolina, Wang, Ping, Aaron, Jesse, Chew, Teng-Leong, Banecki, Krzysztof, Plewczynski, Dariusz, Ruan, Yijun
Published in Scientific reports (20.05.2022)
Published in Scientific reports (20.05.2022)
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Quantitative 3-D morphometric analysis of individual dendritic spines
Basu, Subhadip, Saha, Punam Kumar, Roszkowska, Matylda, Magnowska, Marta, Baczynska, Ewa, Das, Nirmal, Plewczynski, Dariusz, Wlodarczyk, Jakub
Published in Scientific reports (23.02.2018)
Published in Scientific reports (23.02.2018)
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Clinical and molecular characteristics of newly reported mitochondrial disease entity caused by biallelic PARS2 mutations
Ciara, Elżbieta, Rokicki, Dariusz, Lazniewski, Michal, Mierzewska, Hanna, Jurkiewicz, Elżbieta, Bekiesińska-Figatowska, Monika, Piekutowska-Abramczuk, Dorota, Iwanicka-Pronicka, Katarzyna, Szymańska, Edyta, Stawiński, Piotr, Kosińska, Joanna, Pollak, Agnieszka, Pronicki, Maciej, Plewczyński, Dariusz, Płoski, Rafał, Pronicka, Ewa
Published in Journal of human genetics (01.04.2018)
Published in Journal of human genetics (01.04.2018)
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