New insights into adaptation and population structure of cork oak using genotyping by sequencing
Pina‐Martins, Francisco, Baptista, João, Pappas, Georgios, Paulo, Octávio S.
Published in Global change biology (01.01.2019)
Published in Global change biology (01.01.2019)
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Journal Article
Using gradient Forest to predict climate response and adaptation in Cork oak
Vanhove, Mathieu, Pina‐Martins, Francisco, Coelho, Ana Cristina, Branquinho, Cristina, Costa, Augusta, Batista, Dora, Príncipe, Adriana, Sousa, Paulo, Henriques, André, Marques, Isabel, Belkadi, Bouchra, Knowles, L. Lacey, Paulo, Octávio S.
Published in Journal of evolutionary biology (01.06.2021)
Published in Journal of evolutionary biology (01.06.2021)
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Journal Article
Excessive and asymmetrical removal of heterozygous sites by maxSH biases downstream population genetic inference: Implications for hybridization between two primroses
Zhang, Jie, Pina‐Martins, Francisco, Jin, Zu‐Shi, Cha, Yong‐Peng, Liu, Zu‐Yao, Peng, Jun‐Chu, Zhao, Jian‐Li, Li, Qing‐Jun
Published in Journal of systematics and evolution : JSE (01.09.2023)
Published in Journal of systematics and evolution : JSE (01.09.2023)
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Journal Article
Genomic signatures of introgression between commercial and native bumblebees, Bombus terrestris, in western Iberian Peninsula—Implications for conservation and trade regulation
Seabra, Sofia G., Silva, Sara E., Nunes, Vera L., Sousa, Vitor C., Martins, Joana, Marabuto, Eduardo, Rodrigues, Ana S. B., Pina‐Martins, Francisco, Laurentino, Telma G., Rebelo, Maria Teresa, Figueiredo, Elisabete, Paulo, Octávio S.
Published in Evolutionary applications (01.04.2019)
Published in Evolutionary applications (01.04.2019)
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Journal Article
Structure_threader: An improved method for automation and parallelization of programs structure, fastStructure and MavericK on multicore CPU systems
Pina‐Martins, Francisco, Silva, Diogo N., Fino, Joana, Paulo, Octávio S.
Published in Molecular ecology resources (01.11.2017)
Published in Molecular ecology resources (01.11.2017)
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Journal Article
Correction: A first look at sea-lavenders genomics - can genome wide SNP information tip the scales of controversy in the Limonium vulgare species complex?
Pina-Martins, Francisco, Caperta, Ana D, Conceicao, Sofia I R, Nunes, Vera L, Marques, Isabel, Paulo, Octavio S
Published in BMC plant biology (04.02.2023)
Published in BMC plant biology (04.02.2023)
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Journal Article
A first look at sea-lavenders genomics - can genome wide SNP information tip the scales of controversy in the Limonium vulgare species complex?
Pina-Martins, Francisco, Caperta, Ana D, Conceição, Sofia I R, Nunes, Vera L, Marques, Isabel, Paulo, Octávio S
Published in BMC plant biology (16.01.2023)
Published in BMC plant biology (16.01.2023)
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Journal Article
Repeated evolution of blanched coloration in a lizard across independent white‐sand habitats
Laurentino, Telma G., Dittmer, Drew E., Grundler, Maggie R., Pina‐Martins, Francisco, Haddock, Janey, Hibbitts, Toby J., Rosenblum, Erica Bree
Published in Ecology and evolution (01.12.2022)
Published in Ecology and evolution (01.12.2022)
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Journal Article
Population structure in Quercus suber L. revealed by nuclear microsatellite markers
Sousa, Filipe, Costa, Joana, Ribeiro, Carla, Varandas, Marta, Pina-Martins, Francisco, Simões, Fernanda, Matos, José, Glushkova, Maria, Miguel, Célia, Veloso, Maria Manuela, Oliveira, Margarida, Pinto Ricardo, Cândido, Batista, Dora, Paulo, Octávio S
Published in PeerJ (San Francisco, CA) (16.06.2022)
Published in PeerJ (San Francisco, CA) (16.06.2022)
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Journal Article
Population structure, adaptation and divergence of the meadow spittlebug, Philaenus spumarius (Hemiptera, Aphrophoridae), revealed by genomic and morphological data
Seabra, Sofia G, Rodrigues, Ana S B, Silva, Sara E, Neto, Ana Carina, Pina-Martins, Francisco, Marabuto, Eduardo, Thompson, Vinton, Wilson, Michael R, Yurtsever, Selçuk, Halkka, Antti, Rebelo, Maria Teresa, Borges, Paulo A V, Quartau, José A, Jiggins, Chris D, Paulo, Octávio S
Published in PeerJ (San Francisco, CA) (01.06.2021)
Published in PeerJ (San Francisco, CA) (01.06.2021)
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Journal Article
Correction to: Assessing genotype-phenotype associations in three dorsal colour morphs in the meadow spittlebug Philaenus spumarius (L.) (Hemiptera: Aphrophoridae) using genomic and transcriptomic resources
Rodrigues, Ana S B, Silva, Sara E, Pina-Martins, Francisco, Loureiro, João, Castro, Mariana, Gharbi, Karim, Johnson, Kevin P, Dietrich, Christopher H, Borges, Paulo A V, Quartau, José A, Jiggins, Chris D, Paulo, Octávio S, Seabra, Sofia G
Published in BMC genetics (24.03.2020)
Published in BMC genetics (24.03.2020)
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Journal Article
No evidence of inbreeding depression despite a historical severe bottleneck in the endangered Bermuda petrel (Pterodroma cahow)
Afonso, Rita O, Pina-Martins, Francisco, Friesen, Vicki, Sun, Zhengxin, Campioni, Letizia, Madeiros, Jeremy, Silva, Mónica C
Published in The Journal of heredity (23.08.2023)
Published in The Journal of heredity (23.08.2023)
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Journal Article
Ancient divergence, a crisis of salt and another of ice shaped the evolution of the west Mediterranean butterfly Euchloe tagis
Marabuto, Eduardo, Pina-Martins, Francisco, Rebelo, Maria Teresa, Paulo, Octávio S
Published in Biological journal of the Linnean Society (06.11.2020)
Published in Biological journal of the Linnean Society (06.11.2020)
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Journal Article
Haplotype diversity patterns in Quercus suber (Fagaceae) inferred from cpDNA sequence data
Sousa, Filipe, Viegas, Mariana Bray, Costa, Joana, Marques, Isabel, Pina-Martins, Francisco, Simões, Fernanda, Matos, José, Glushkova, Maria, Miguel, Célia, Veloso, Maria Manuela, Oliveira, M. Margarida, Ricardo, Cândido Pinto, Batista, Dora, Paulo, Octávio S.
Published in Plant systematics and evolution (01.12.2023)
Published in Plant systematics and evolution (01.12.2023)
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Journal Article
Population genomics of Bombus terrestris reveals high but unstructured genetic diversity in a potential glacial refugium
Silva, Sara E, Seabra, Sofia G, Carvalheiro, Luísa G, Nunes, Vera L, Marabuto, Eduardo, Mendes, Raquel, Rodrigues, Ana S B, Pina-Martins, Francisco, Yurtsever, Selçuk, Laurentino, Telma G, Figueiredo, Elisabete, Rebelo, Maria T, Paulo, Octávio S
Published in Biological journal of the Linnean Society (30.01.2020)
Published in Biological journal of the Linnean Society (30.01.2020)
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Journal Article
Building a Portuguese coalition for biodiversity genomics
Marques, João P, Alves, Paulo C, Amorim, Isabel R, Lopes, Ricardo J, Moura, Monica, Myers, Eugene, Sim-sim, Manuela, Sousa-Santos, Carla, Alves, M. Judite, Borges, Paulo A. V, Brown, Thomas, Carneiro, Miguel, Carrapato, Carlos, Ceríaco, Luís M. P, Ciofi, Claúdio, da Silva, Luís P, Diedericks, Genevieve, Diroma, Maria Angela, Farelo, Liliana, menti, Giulio, Gil, Fátima, Grilo, Miguel, Iannucci, Alessio, Leitão, Henrique G, Máguas, Cristina, Mc Cartney, Ann M, Mendes, Sofia L, Moreno, João M, Morselli, Marco, Mouton, Alice, Natali, Chiara, Pereira, Fernando, Rego, Rúben M. C, Resendes, Roberto, Roxo, Guilherme, Svardal, Hannes, Trindade, Helena, Vicente, Sara, Winkler, Sylke, Alvarenga, Marcela, Amaral, Andreia J, Antunes, Agostinho, Campos, Paula F, Canário, Adelino V. M, Castilho, Rita, Castro, L. Filipe C, Crottini, Angelica, Cunha, Mónica V, Espregueira Themudo, Gonçalo, Esteves, Pedro J, Faria, Rui, Rodríguez Fernandes, Carlos, Ledoux, Jean-Baptiste, Louro, Bruno, Magalhaes, Sara, Paulo, Octávio S, Pearson, Gareth, Pimenta, João, Pina-Martins, Francisco, Santos, Teresa L, Serrão, Ester, Melo-Ferreira, José, Sousa, Vítor C
Published in Npj Biodiversity (01.12.2024)
Published in Npj Biodiversity (01.12.2024)
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Journal Article
Identifying signatures of natural selection in cork oak (Quercus suber L.) genes through SNP analysis
Modesto, Inês S, Miguel, Célia, Pina-Martins, Francisco, Glushkova, Maria, Veloso, Manuela, Paulo, Octávio S, Batista, Dora
Published in Tree genetics & genomes (01.12.2014)
Published in Tree genetics & genomes (01.12.2014)
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Journal Article
Assessing genotype-phenotype associations in three dorsal colour morphs in the meadow spittlebug Philaenus spumarius (L.) (Hemiptera: Aphrophoridae) using genomic and transcriptomic resources
Rodrigues, Ana S B, Silva, Sara E, Pina-Martins, Francisco, Loureiro, João, Castro, Mariana, Gharbi, Karim, Johnson, Kevin P, Dietrich, Christopher H, Borges, Paulo A V, Quartau, José A, Jiggins, Chris D, Paulo, Octávio S, Seabra, Sofia G
Published in BMC genetics (15.11.2016)
Published in BMC genetics (15.11.2016)
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Journal Article