Interpreting Whole-Genome Sequence Analyses of Foodborne Bacteria for Regulatory Applications and Outbreak Investigations
Pightling, Arthur W, Pettengill, James B, Luo, Yan, Baugher, Joseph D, Rand, Hugh, Strain, Errol
Published in Frontiers in microbiology (10.07.2018)
Published in Frontiers in microbiology (10.07.2018)
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Journal Article
Using Evolutionary Analyses to Refine Whole-Genome Sequence Match Criteria
Pightling, Arthur W., Rand, Hugh, Pettengill, James
Published in Frontiers in microbiology (16.06.2022)
Published in Frontiers in microbiology (16.06.2022)
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Journal Article
Real-Time Pathogen Detection in the Era of Whole-Genome Sequencing and Big Data: Comparison of k-mer and Site-Based Methods for Inferring the Genetic Distances among Tens of Thousands of Salmonella Samples
Pettengill, James B, Pightling, Arthur W, Baugher, Joseph D, Rand, Hugh, Strain, Errol
Published in PloS one (10.11.2016)
Published in PloS one (10.11.2016)
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Journal Article
Genes significantly associated with lineage II food isolates of Listeria monocytogenes
Pirone-Davies, Cary, Chen, Yi, Pightling, Arthur, Ryan, Gina, Wang, Yu, Yao, Kuan, Hoffmann, Maria, Allard, Marc W
Published in BMC genomics (25.09.2018)
Published in BMC genomics (25.09.2018)
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Journal Article
Transient and resident pathogens: Intra-facility genetic diversity of Listeria monocytogenes and Salmonella from food production environments
Pettengill, James B, Rand, Hugh, Wang, Shizhen S, Kautter, Donald, Pightling, Arthur, Wang, Yu
Published in PloS one (01.09.2022)
Published in PloS one (01.09.2022)
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Journal Article
An Overview of Foodborne Sample-Initiated Retrospective Outbreak Investigations and Interagency Collaboration in the United States
Wellman, Allison, Bazaco, Michael C, Blessington, Tyann, Pightling, Arthur, Dwarka, Asha, Hintz, Leslie, Wise, Matthew E., Gieraltowski, Laura, Conrad, Amanda, Nguyen, Thai-An, Hise, Kelley, Viazis, Stelios, Beal, Jennifer
Published in Journal of food protection (01.06.2023)
Published in Journal of food protection (01.06.2023)
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Journal Article
Assessment of plasmids for relating the 2020 Salmonella enterica serovar Newport onion outbreak to farms implicated by the outbreak investigation
Commichaux, Seth, Rand, Hugh, Javkar, Kiran, Molloy, Erin K, Pettengill, James B, Pightling, Arthur, Hoffmann, Maria, Pop, Mihai, Jayeola, Victor, Foley, Steven, Luo, Yan
Published in BMC genomics (04.04.2023)
Published in BMC genomics (04.04.2023)
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Journal Article
An Outbreak Investigation of Salmonella Typhimurium Illnesses in the United States Linked to Packaged Leafy Greens Produced at a Controlled Environment Agriculture Indoor Hydroponic Operation – 2021
McClure, Monica, Whitney, Brooke, Gardenhire, Ifueko, Crosby, Alvin, Wellman, Allison, Patel, Kane, McCormic, Zachary D., Gieraltowski, Laura, Gollarza, Lauren, Low, Mabel S.F., Adams, Jennifer, Pightling, Arthur, Bell, Rebecca L., Nolte, Kurt, Tijerina, Mary, Frost, Joseph T., Beix, James A., Boegler, Karen A., Dow, Julie, Altman, Shana, Wise, Matthew E., Bazaco, Michael C., Viazis, Stelios
Published in Journal of food protection (01.05.2023)
Published in Journal of food protection (01.05.2023)
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A roadmap for the generation of benchmarking resources for antimicrobial resistance detection using next generation sequencing [version 2; peer review: 1 approved, 2 approved with reservations]
Petrillo, Mauro, Fabbri, Marco, Kagkli, Dafni Maria, Querci, Maddalena, Van den Eede, Guy, Alm, Erik, Aytan-Aktug, Derya, Capella-Gutierrez, Salvador, Carrillo, Catherine, Cestaro, Alessandro, Chan, Kok-Gan, Coque, Teresa, Endrullat, Christoph, Gut, Ivo, Hammer, Paul, Kay, Gemma L., Madec, Jean-Yves, Mather, Alison E., McHardy, Alice Carolyn, Naas, Thierry, Paracchini, Valentina, Peter, Silke, Pightling, Arthur, Raffael, Barbara, Rossen, John, Ruppé, Etienne, Schlaberg, Robert, Vanneste, Kevin, Weber, Lukas M., Westh, Henrik, Angers-Loustau, Alexandre
Published in F1000 research (16.03.2022)
Published in F1000 research (16.03.2022)
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Journal Article
Draft Genome Sequence of Listeria monocytogenes Strain LI0521 (syn. HPB7171), Isolated in 1983 during an Outbreak in Massachusetts Caused by Contaminated Cheese
Pightling, Arthur W, Lin, Min, Pagotto, Franco
Published in Genome announcements (Washington, DC) (24.07.2014)
Published in Genome announcements (Washington, DC) (24.07.2014)
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