Combined impact of primary tumor molecular profile and location in the relapse pattern of early-stage, microsatellite stable colorectal cancer
Manca, Paolo, Kris, Ayush, Walch, Henry S., Fong, Christopher, Jee, Justin, Pichotta, Karl, Schultz, Nikolaus, Chatila, Walid Khaled, Sanchez-Vega, Francisco, Yaeger, Rona
Published in Journal of clinical oncology (01.06.2024)
Published in Journal of clinical oncology (01.06.2024)
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Journal Article
DNA Liquid Biopsies for Cancer-Associated Venous Thromboembolism Prediction
Jee, Justin, Brannon, Angela Rose, Fong, Chris, Lee, Adrian, Gray, Lauren, Pichotta, Karl, Luthra, Anisha, Diosdado, Monica, Haque, Mohammad, Guo, Jiannan, Hernandez, Jennifer, Garg, Kavita, Derkach, Andriy, Wilhelm, Clare, Singh, Rohan, Arcila, Maria E., Pavlakis, Nick, Clarke, Stephen, Shah, Sohrab P, Razavi, Pedram, Reis-Filho, Jorge, Ladanyi, Marc, Schultz, Nikolaus, Zwicker, Jeffrey I., Berger, Michael F., Li, Bob T, Mantha, Simon
Published in Blood (02.11.2023)
Published in Blood (02.11.2023)
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Journal Article
DNA liquid biopsy-based prediction of cancer-associated venous thromboembolism
Jee, Justin, Brannon, A. Rose, Singh, Rohan, Derkach, Andriy, Fong, Christopher, Lee, Adrian, Gray, Lauren, Pichotta, Karl, Luthra, Anisha, Diosdado, Monica, Haque, Mohammad, Guo, Jiannan, Hernandez, Jennifer, Garg, Kavita, Wilhelm, Clare, Arcila, Maria E, Pavlakis, Nick, Clarke, Stephen, Shah, Sohrab P, Razavi, Pedram, Reis-Filho, Jorge S, Ladanyi, Marc, Schultz, Nikolaus, Zwicker, Jeffrey, Berger, Michael F, Li, Bob T, Mantha, Simon
Published in Nature medicine (01.09.2024)
Published in Nature medicine (01.09.2024)
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Journal Article
Abstract 911: Automatic identification of subjective appetite or weight loss in clinician notes empowers studies of cachexia
Park, Tricia, Pichotta, Karl, Fong, Christopher J., Schultz, Nikolaus, Iyengar, Puneeth, Jee, Justin, Reznik, Ed
Published in Cancer research (Chicago, Ill.) (22.03.2024)
Published in Cancer research (Chicago, Ill.) (22.03.2024)
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Abstract 3556: A pan-cancer ex vivo drug screen database for next-generation pharmacogenomics and functional precision oncology
Markus, Anneliese, Pichotta, Karl, Quinn, Jeffrey, White, Jessica, Tosh, Christopher, Liu, Jinrui, Coyne, Erin, Tansey, Wesley
Published in Cancer research (Chicago, Ill.) (22.03.2024)
Published in Cancer research (Chicago, Ill.) (22.03.2024)
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Journal Article
Large-scale clinicogenomic models of solid tumor CNS metastasis
Jee, Justin, Luthra, Anisha, Fong, Christopher, Pichotta, Karl, Tran, Thinh, Altoe, Mirella, Miller, Alex, Shen, Ronglai, Berger, Michael F., Sanchez-Vega, Francisco, Maron, Steven Brad, Safonov, Anton, Kehl, Kenneth L., Reis-Filho, Jorge S., Schrag, Deborah, Shah, Sohrab P, Razavi, Pedram, Li, Bob T., Riely, Gregory J., Schultz, Nikolaus
Published in Journal of clinical oncology (01.06.2023)
Published in Journal of clinical oncology (01.06.2023)
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Journal Article
Semisupervised Training of a Brain MRI Tumor Detection Model Using Mined Annotations
Swinburne, Nathaniel C, Yadav, Vivek, Kim, Julie, Choi, Ye R, Gutman, David C, Yang, Jonathan T, Moss, Nelson, Stone, Jacqueline, Tisnado, Jamie, Hatzoglou, Vaios, Haque, Sofia S, Karimi, Sasan, Lyo, John, Juluru, Krishna, Pichotta, Karl, Gao, Jianjiong, Shah, Sohrab P, Holodny, Andrei I, Young, Robert J
Published in Radiology (01.04.2022)
Published in Radiology (01.04.2022)
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Journal Article
Abstract 1252: AI-derived predictions improve identification of real-world cancer driver mutations
Tran, Thinh N., Fong, Chris, Pichotta, Karl, Luthra, Anisha, Shen, Ronglai, Chen, Yuan, Waters, Michele, Kim, Susie, Riely, Gregory, Chakravarty, Debyani, Schultz, Nikolaus, Jee, Justin
Published in Cancer research (Chicago, Ill.) (22.03.2024)
Published in Cancer research (Chicago, Ill.) (22.03.2024)
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Journal Article
Abstract 3779: Genomic and clinical characterization of metastatic patterns using real-word data from a large cohort of colorectal cancer patients
Manca, Paolo, Kris, Ayush V., Walch, Henry, Fong, Christopher, Jee, Justin, Pichotta, Karl, Schultz, Nikolaus, Chatila, Walid K., Yaeger, Rona, Sanchez-Vega, Francisco
Published in Cancer research (Chicago, Ill.) (22.03.2024)
Published in Cancer research (Chicago, Ill.) (22.03.2024)
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Journal Article
Fast, light, and scalable: harnessing data-mined line annotations for automated tumor segmentation on brain MRI
Swinburne, Nathaniel C., Yadav, Vivek, Murthy, Krishna Nand Keshava, Elnajjar, Pierre, Shih, Hao-Hsin, Panyam, Prashanth Kumar, Santilli, Alice, Gutman, David C., Pike, Luke, Moss, Nelson S., Stone, Jacqueline, Hatzoglou, Vaios, Shah, Akash, Juluru, Krishna, Shah, Sohrab P., Holodny, Andrei I., Young, Robert J.
Published in European radiology (01.09.2023)
Published in European radiology (01.09.2023)
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Journal Article
Abstract 1158: A.I.-assisted clinical data curation to determine genomic biomarkers of cancer metastasis
Luthra, Anisha, Pichotta, Karl, Mastrogiacomo, Brooke, McCarthy, Samantha, Maron, Steven, Gao, Jianjiong, Jee, Justin, Fong, Christopher J., Schultz, Nikolaus
Published in Cancer research (Chicago, Ill.) (15.06.2022)
Published in Cancer research (Chicago, Ill.) (15.06.2022)
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Journal Article
Abstract 4259: Identification of anti-neoplastic therapy given before initial visit at a referral center using natural language processing applied to medical oncology initial consultation notes
Tran, Thinh N., Pichotta, Karl B., Liu, Si-Yang, Fong, Christopher, Luthra, Anisha, Mastrogiacomo, Brooke, Maron, Steven, Schrag, Deborah, Shah, Sohrab P., Razavi, Pedram, Li, Bob T., Riely, Gregory J., Schultz, Nikolaus, Jee, Justin
Published in Cancer research (Chicago, Ill.) (04.04.2023)
Published in Cancer research (Chicago, Ill.) (04.04.2023)
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Journal Article
Abstract 3892: Systematic generation of a clinicogenomic harmonized oncologic real-world dataset (MSK-CHORD)
Fong, Christopher J., Pichotta, Karl, Tran, Thinh, Waters, Michele, Fu, Tom, Pirun, Mono, Altoe, Mirella, Mastrogiacomo, Brooke, Luthra, Anisha, Ahmed, Mehnaj, Pasha, Arfath, Kohli, Armaan, Lim, Raymond, Pollard, Tom, Moore, Darin, Gross, Benjamin, Wang, Avery, Chennault, Calla, Kundra, Ritika, Madupuri, Ramyasree, de Bruijn, Ino, Lisman, Aaron, Chatila, Walid K., Nandakumar, Subhiksha, Begum, Anika, Rose, Doori, Kehl, Kenneth L., Schrag, Deborah, Berger, Michael, Carrot-Zhang, Jian, Razavi, Pedram, Li, Bob, Stetson, Peter, Schultz, Nikolaus, Jee, Justin
Published in Cancer research (Chicago, Ill.) (22.03.2024)
Published in Cancer research (Chicago, Ill.) (22.03.2024)
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Journal Article
Abstract 4260: Understanding genomic and social determinants of cancer immunotherapy outcome across ancestry
Fong, Christopher J., Waters, Michele, Pichotta, Karl, Jee, Justin, Jutagir, Devika R., Ma, David, Perea-Chamblee, Tomin, Kim, Susie, Arora, Kanika, Mastrogiacomo, Brooke, Tran, Thinh, Maron, Steven, Altoe, Mirella, Luthra, Anisha, Kholodenko, Joseph, Patha, Arfath, Rose, Doori, Berger, Michael F., Riely, Gregory J., Schultz, Nikolaus, Goyert, Sanna, Schoenfeld, Adam, Gany, Francesca, Carrot-Zhang, Jian
Published in Cancer research (Chicago, Ill.) (04.04.2023)
Published in Cancer research (Chicago, Ill.) (04.04.2023)
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Journal Article
Abstract 5721: Automated annotation for large-scale clinicogenomic models of lung cancer treatment response and overall survival
Jee, Justin, Fong, Chris, Pichotta, Karl, Tran, Thinh, Luthra, Anisha, Altoe, Mirella, Maron, Steven, Shen, Ronglai, Liu, Si-Yang, Waters, Michele, Kholodenko, Joseph, Mastrogiacomo, Brooke, Kim, Susie, Brannon, A Rose, Berger, Michael F., Martin, Axel, Chang, Jason, Safonov, Anton, Reis-Filho, Jorge S., Schrag, Deborah, Shah, Sohrab P., Razavi, Pedram, Li, Bob T., Riely, Gregory J., Schultz, Nikolaus
Published in Cancer research (Chicago, Ill.) (04.04.2023)
Published in Cancer research (Chicago, Ill.) (04.04.2023)
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Journal Article
Relational theories with null values and non-herbrand stable models
LIFSCHITZ, VLADIMIR, PICHOTTA, KARL, YANG, FANGKAI
Published in Theory and practice of logic programming (01.07.2012)
Published in Theory and practice of logic programming (01.07.2012)
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Journal Article
Does BERT Pretrained on Clinical Notes Reveal Sensitive Data?
Lehman, Eric, Jain, Sarthak, Pichotta, Karl, Goldberg, Yoav, Wallace, Byron C
Published in arXiv.org (22.04.2021)
Published in arXiv.org (22.04.2021)
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