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Virulence genes and phylogenetic groups of uropathogenic Escherichia coli isolates from patients with urinary tract infection and uninfected control subjects: a case-control study
Rezatofighi, Seyedeh Elham, Mirzarazi, Mahsa, Salehi, Mansour
Published in BMC infectious diseases (17.04.2021)
Published in BMC infectious diseases (17.04.2021)
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Phylogenetic, virulence and antibiotic resistance characteristics of commensal strain populations of Escherichia coli from community subjects in the Paris area in 2010 and evolution over 30 years
Massot, Méril, Daubié, Anne-Sophie, Clermont, Olivier, Jauréguy, Françoise, Couffignal, Camille, Dahbi, Ghizlane, Mora, Azucena, Blanco, Jorge, Branger, Catherine, Mentré, France, Eddi, Alain, Picard, Bertrand, Denamur, Erick, the COLIVILLE Group
Published in Microbiology (Society for General Microbiology) (01.04.2016)
Published in Microbiology (Society for General Microbiology) (01.04.2016)
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Phylogenetic reduction of the magnocellular red nucleus in primates and inter-subject variability in humans
Stacho, Martin, Häusler, A. Niklas, Brandstetter, Andrea, Iannilli, Francesca, Mohlberg, Hartmut, Schiffer, Christian, Smaers, Jeroen B., Amunts, Katrin
Published in Frontiers in neuroanatomy (13.03.2024)
Published in Frontiers in neuroanatomy (13.03.2024)
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Comparative analysis of fecal DNA extraction methods with phylogenetic microarray: Effective recovery of bacterial and archaeal DNA using mechanical cell lysis
Salonen, Anne, Nikkilä, Janne, Jalanka-Tuovinen, Jonna, Immonen, Outi, Rajilić-Stojanović, Mirjana, Kekkonen, Riina A., Palva, Airi, de Vos, Willem M.
Published in Journal of microbiological methods (01.05.2010)
Published in Journal of microbiological methods (01.05.2010)
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PhyloSift: phylogenetic analysis of genomes and metagenomes
Darling, Aaron E., Jospin, Guillaume, Lowe, Eric, Matsen, Frederick A., Bik, Holly M., Eisen, Jonathan A.
Published in PeerJ (San Francisco, CA) (09.01.2014)
Published in PeerJ (San Francisco, CA) (09.01.2014)
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A class of identifiable phylogenetic birth–death models
Legried, Brandon, Terhorst, Jonathan
Published in Proceedings of the National Academy of Sciences - PNAS (30.08.2022)
Published in Proceedings of the National Academy of Sciences - PNAS (30.08.2022)
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Phylogenetic convolutional neural networks in metagenomics
Fioravanti, Diego, Giarratano, Ylenia, Maggio, Valerio, Agostinelli, Claudio, Chierici, Marco, Jurman, Giuseppe, Furlanello, Cesare
Published in BMC bioinformatics (08.03.2018)
Published in BMC bioinformatics (08.03.2018)
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Phylogenetic Analysis of Dysbiosis in Ulcerative Colitis During Remission
Rajilić-Stojanović, Mirjana, Shanahan, Fergus, Guarner, Francisco, de Vos, Willem M.
Published in Inflammatory bowel diseases (01.03.2013)
Published in Inflammatory bowel diseases (01.03.2013)
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Molecular epidemiology of PRRSV: A phylogenetic perspective
Shi, Mang, Lam, Tommy Tsan-Yuk, Hon, Chung-Chau, Hui, Raymond Kin-Hei, Faaberg, Kay S., Wennblom, Trevor, Murtaugh, Michael P., Stadejek, Tomasz, Leung, Frederick Chi-Ching
Published in Virus research (01.12.2010)
Published in Virus research (01.12.2010)
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Broccoli: Combining Phylogenetic and Network Analyses for Orthology Assignment
Derelle, Romain, Philippe, Hervé, Colbourne, John K
Published in Molecular biology and evolution (01.11.2020)
Published in Molecular biology and evolution (01.11.2020)
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Worldwide Phylogenetic Group Patterns of Escherichia coli from Commensal Human and Wastewater Treatment Plant Isolates
Stoppe, Nancy de Castro, Silva, Juliana S., Carlos, Camila, Sato, Maria I. Z., Saraiva, Antonio M., Ottoboni, Laura M. M., Torres, Tatiana T.
Published in Frontiers in microbiology (21.12.2017)
Published in Frontiers in microbiology (21.12.2017)
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Highlighting new phylogenetic specificities of Crohn's disease microbiota
Mondot, S., Kang, S., Furet, J. P., Aguirre de Carcer, D., McSweeney, C., Morrison, M., Marteau, P., Doré, J., Leclerc, M.
Published in Inflammatory bowel diseases (01.01.2011)
Published in Inflammatory bowel diseases (01.01.2011)
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Phylogenetic and Case-Control Study on Hepatitis E Virus Infection in Germany
Wichmann, Ole, Schimanski, Sven, Koch, Judith, Kohler, Martin, Rothe, Camilla, Plentz, Annelie, Jilg, Wolfgang, Stark, Klaus
Published in The Journal of infectious diseases (15.12.2008)
Published in The Journal of infectious diseases (15.12.2008)
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Dysbiosis of fecal microbiota in Crohn's disease patients as revealed by a custom phylogenetic microarray
Kang, Seungha, Denman, Stuart E., Morrison, Mark, Yu, Zhongtang, Dore, Joel, Leclerc, Marion, McSweeney, Chris S.
Published in Inflammatory bowel diseases (01.12.2010)
Published in Inflammatory bowel diseases (01.12.2010)
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Phylogenetic analysis of the human antibody repertoire reveals quantitative signatures of immune senescence and aging
de Bourcy, Charles F. A., Angel, Cesar J. Lopez, Vollmers, Christopher, Dekker, Cornelia L., Davis, Mark M., Quake, Stephen R.
Published in Proceedings of the National Academy of Sciences - PNAS (31.01.2017)
Published in Proceedings of the National Academy of Sciences - PNAS (31.01.2017)
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Phylogenetic evidence clarifies the history of the extrusion of Indochina
Li, Xiao-Qian, Peng, Huan-Wen, Xiang, Kun-Li, Xiang, Xiao-Guo, Jabbour, Florian, Ortiz, Rosa del C., Soltis, Pamela S., Soltis, Douglas E., Wang, Wei
Published in Proceedings of the National Academy of Sciences - PNAS (27.08.2024)
Published in Proceedings of the National Academy of Sciences - PNAS (27.08.2024)
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