Multi-omics disease module detection with an explainable Greedy Decision Forest
Pfeifer, Bastian, Baniecki, Hubert, Saranti, Anna, Biecek, Przemyslaw, Holzinger, Andreas
Published in Scientific reports (07.10.2022)
Published in Scientific reports (07.10.2022)
Get full text
Journal Article
Actionable Explainable AI (AxAI): A Practical Example with Aggregation Functions for Adaptive Classification and Textual Explanations for Interpretable Machine Learning
Saranti, Anna, Hudec, Miroslav, Mináriková, Erika, Takáč, Zdenko, Großschedl, Udo, Koch, Christoph, Pfeifer, Bastian, Angerschmid, Alessa, Holzinger, Andreas
Published in Machine learning and knowledge extraction (01.12.2022)
Published in Machine learning and knowledge extraction (01.12.2022)
Get full text
Journal Article
EHR problem list clustering for improved topic-space navigation
Kreuzthaler, Markus, Pfeifer, Bastian, Vera Ramos, Jose Antonio, Kramer, Diether, Grogger, Victor, Bredenfeldt, Sylvia, Pedevilla, Markus, Krisper, Peter, Schulz, Stefan
Published in BMC medical informatics and decision making (04.04.2019)
Published in BMC medical informatics and decision making (04.04.2019)
Get full text
Journal Article
Towards multi-modal causability with Graph Neural Networks enabling information fusion for explainable AI
Holzinger, Andreas, Malle, Bernd, Saranti, Anna, Pfeifer, Bastian
Published in Information fusion (01.07.2021)
Published in Information fusion (01.07.2021)
Get full text
Journal Article
PopGenome: an efficient Swiss army knife for population genomic analyses in R
Pfeifer, Bastian, Wittelsbürger, Ulrich, Ramos-Onsins, Sebastian E, Lercher, Martin J
Published in Molecular biology and evolution (01.07.2014)
Published in Molecular biology and evolution (01.07.2014)
Get full text
Journal Article
Tree smoothing: Post-hoc regularization of tree ensembles for interpretable machine learning
Pfeifer, Bastian, Gevaert, Arne, Loecher, Markus, Holzinger, Andreas
Published in Information sciences (01.02.2025)
Published in Information sciences (01.02.2025)
Get full text
Journal Article
Embedding-based terminology expansion via secondary use of large clinical real-world datasets
Kugic, Amila, Pfeifer, Bastian, Schulz, Stefan, Kreuzthaler, Markus
Published in Journal of biomedical informatics (01.11.2023)
Published in Journal of biomedical informatics (01.11.2023)
Get full text
Journal Article
Detection and quantification of introgression using Bayesian inference based on conjugate priors
Pfeifer, Bastian, Kapan, Durrell D, Herzog, Sereina A
Published in Bioinformatics (Oxford, England) (01.11.2024)
Published in Bioinformatics (Oxford, England) (01.11.2024)
Get full text
Journal Article
From 3D point‐cloud data to explainable geometric deep learning: State‐of‐the‐art and future challenges
Saranti, Anna, Pfeifer, Bastian, Gollob, Christoph, Stampfer, Karl, Holzinger, Andreas
Published in Wiley interdisciplinary reviews. Data mining and knowledge discovery (01.11.2024)
Published in Wiley interdisciplinary reviews. Data mining and knowledge discovery (01.11.2024)
Get full text
Journal Article
Effective signal reconstruction from multiple ranked lists via convex optimization
Schimek, Michael G., Vitale, Luca, Pfeifer, Bastian, La Rocca, Michele
Published in Data mining and knowledge discovery (01.05.2024)
Published in Data mining and knowledge discovery (01.05.2024)
Get full text
Journal Article
Parea: Multi-view ensemble clustering for cancer subtype discovery
Pfeifer, Bastian, Bloice, Marcus D., Schimek, Michael G.
Published in Journal of biomedical informatics (01.07.2023)
Published in Journal of biomedical informatics (01.07.2023)
Get full text
Journal Article
Ensemble-GNN: federated ensemble learning with graph neural networks for disease module discovery and classification
Pfeifer, Bastian, Chereda, Hryhorii, Martin, Roman, Saranti, Anna, Clemens, Sandra, Hauschild, Anne-Christin, Beißbarth, Tim, Holzinger, Andreas, Heider, Dominik
Published in Bioinformatics (Oxford, England) (01.11.2023)
Published in Bioinformatics (Oxford, England) (01.11.2023)
Get full text
Journal Article
Genome scans for selection and introgression based on k‐nearest neighbour techniques
Pfeifer, Bastian, Alachiotis, Nikolaos, Pavlidis, Pavlos, Schimek, Michael G.
Published in Molecular ecology resources (01.11.2020)
Published in Molecular ecology resources (01.11.2020)
Get full text
Journal Article