A Uniform System for the Annotation of Vertebrate microRNA Genes and the Evolution of the Human microRNAome
Fromm, Bastian, Billipp, Tyler, Peck, Liam E, Johansen, Morten, Tarver, James E, King, Benjamin L, Newcomb, James M, Sempere, Lorenzo F, Flatmark, Kjersti, Hovig, Eivind, Peterson, Kevin J
Published in Annual review of genetics (23.11.2015)
Published in Annual review of genetics (23.11.2015)
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The Cambrian Conundrum: Early Divergence and Later Ecological Success in the Early History of Animals
Erwin, Douglas H., Laflamme, Marc, Tweedt, Sarah M., Sperling, Erik A., Pisani, Davide, Peterson, Kevin J.
Published in Science (American Association for the Advancement of Science) (25.11.2011)
Published in Science (American Association for the Advancement of Science) (25.11.2011)
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MirGeneDB 2.1: toward a complete sampling of all major animal phyla
Fromm, Bastian, Høye, Eirik, Domanska, Diana, Zhong, Xiangfu, Aparicio-Puerta, Ernesto, Ovchinnikov, Vladimir, Umu, Sinan U, Chabot, Peter J, Kang, Wenjing, Aslanzadeh, Morteza, Tarbier, Marcel, Mármol-Sánchez, Emilio, Urgese, Gianvito, Johansen, Morten, Hovig, Eivind, Hackenberg, Michael, Friedländer, Marc R, Peterson, Kevin J
Published in Nucleic acids research (07.01.2022)
Published in Nucleic acids research (07.01.2022)
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The Antagonistic Gene Paralogs Upf3a and Upf3b Govern Nonsense-Mediated RNA Decay
Shum, Eleen Y., Jones, Samantha H., Shao, Ada, Chousal, Jennifer N., Krause, Matthew D., Chan, Wai-Kin, Lou, Chih-Hong, Espinoza, Josh L., Song, Hye-Won, Phan, Mimi H., Ramaiah, Madhuvanthi, Huang, Lulu, McCarrey, John R., Peterson, Kevin J., De Rooij, Dirk G., Cook-Andersen, Heidi, Wilkinson, Miles F.
Published in Cell (07.04.2016)
Published in Cell (07.04.2016)
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Episodic radiations in the fly tree of life
Wiegmann, Brian M, Trautwein, Michelle D, Winkler, Isaac S, Barr, Norman B, Kim, Jung-Wook, Lambkin, Christine, Bertone, Matthew A, Cassel, Brian K, Bayless, Keith M, Heimberg, Alysha M, Wheeler, Benjamin M, Peterson, Kevin J, Pape, Thomas, Sinclair, Bradley J, Skevington, Jeffrey H, Blagoderov, Vladimir, Caravas, Jason, Kutty, Sujatha Narayanan, Schmidt-Ott, Urs, Kampmeier, Gail E, Thompson, F. Christian, Grimaldi, David A, Beckenbach, Andrew T, Courtney, Gregory W, Friedrich, Markus, Meier, Rudolf, Yeates, David K
Published in Proceedings of the National Academy of Sciences - PNAS (05.04.2011)
Published in Proceedings of the National Academy of Sciences - PNAS (05.04.2011)
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microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
Heimberg, Alysha M., Cowper-Sal·lari, Richard, Sémon, Marie, Donoghue, Philip C. J., Peterson, Kevin J., Schopf, J. William
Published in Proceedings of the National Academy of Sciences - PNAS (09.11.2010)
Published in Proceedings of the National Academy of Sciences - PNAS (09.11.2010)
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Acoelomorph flatworms are deuterostomes related to Xenoturbella
PHILIPPE, Hervé, BRINKMANN, Henner, COPLEY, Richard R, MOROZ, Leonid L, NAKANO, Hiroaki, POUSTKA, Albert J, WALLBERG, Andreas, PETERSON, Kevin J, TELFORD, Maximilian J
Published in Nature (London) (10.02.2011)
Published in Nature (London) (10.02.2011)
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A congruent solution to arthropod phylogeny: phylogenomics, microRNAs and morphology support monophyletic Mandibulata
Rota-Stabelli, Omar, Campbell, Lahcen, Brinkmann, Henner, Edgecombe, Gregory D., Longhorn, Stuart J., Peterson, Kevin J., Pisani, Davide, Philippe, Hervé, Telford, Maximilian J.
Published in Proceedings of the Royal Society. B, Biological sciences (22.01.2011)
Published in Proceedings of the Royal Society. B, Biological sciences (22.01.2011)
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The Ediacaran emergence of bilaterians: congruence between the genetic and the geological fossil records
Peterson, Kevin J, Cotton, James A, Gehling, James G, Pisani, Davide
Published in Philosophical transactions of the Royal Society of London. Series B. Biological sciences (27.04.2008)
Published in Philosophical transactions of the Royal Society of London. Series B. Biological sciences (27.04.2008)
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MicroRNAs and phylogenomics resolve the relationships of Tardigrada and suggest that velvet worms are the sister group of Arthropoda
Campbell, Lahcen I, Rota-Stabelli, Omar, Edgecombe, Gregory D, Marchioro, Trevor, Longhorn, Stuart J, Telford, Maximilian J, Philippe, Hervé, Rebecchi, Lorena, Peterson, Kevin J, Pisani, Davide
Published in Proceedings of the National Academy of Sciences - PNAS (20.09.2011)
Published in Proceedings of the National Academy of Sciences - PNAS (20.09.2011)
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The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
Tarver, James E, Dos Reis, Mario, Mirarab, Siavash, Moran, Raymond J, Parker, Sean, O'Reilly, Joseph E, King, Benjamin L, O'Connell, Mary J, Asher, Robert J, Warnow, Tandy, Peterson, Kevin J, Donoghue, Philip C J, Pisani, Davide
Published in Genome biology and evolution (01.02.2016)
Published in Genome biology and evolution (01.02.2016)
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The deep evolution of metazoan microRNAs
Wheeler, Benjamin M., Heimberg, Alysha M., Moy, Vanessa N., Sperling, Erik A., Holstein, Thomas W., Heber, Steffen, Peterson, Kevin J.
Published in Evolution & development (01.01.2009)
Published in Evolution & development (01.01.2009)
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Unicellular Origin of the Animal MicroRNA Machinery
Bråte, Jon, Neumann, Ralf S., Fromm, Bastian, Haraldsen, Arthur A.B., Tarver, James E., Suga, Hiroshi, Donoghue, Philip C.J., Peterson, Kevin J., Ruiz-Trillo, Iñaki, Grini, Paul E., Shalchian-Tabrizi, Kamran
Published in Current biology (22.10.2018)
Published in Current biology (22.10.2018)
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MirGeneDB 2.0: the metazoan microRNA complement
Fromm, Bastian, Domanska, Diana, Høye, Eirik, Ovchinnikov, Vladimir, Kang, Wenjing, Aparicio-Puerta, Ernesto, Johansen, Morten, Flatmark, Kjersti, Mathelier, Anthony, Hovig, Eivind, Hackenberg, Michael, Friedländer, Marc R, Peterson, Kevin J
Published in Nucleic acids research (08.01.2020)
Published in Nucleic acids research (08.01.2020)
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Large scale changes in the transcriptome of Eisenia fetida during regeneration
Bhambri, Aksheev, Dhaunta, Neeraj, Patel, Surendra Singh, Hardikar, Mitali, Bhatt, Abhishek, Srikakulam, Nagesh, Shridhar, Shruti, Vellarikkal, Shamsudheen, Pandey, Rajesh, Jayarajan, Rijith, Verma, Ankit, Kumar, Vikram, Gautam, Pradeep, Khanna, Yukti, Khan, Jameel Ahmed, Fromm, Bastian, Peterson, Kevin J, Scaria, Vinod, Sivasubbu, Sridhar, Pillai, Beena
Published in PloS one (27.09.2018)
Published in PloS one (27.09.2018)
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MicroRNAs support a turtle + lizard clade
Lyson, Tyler R., Sperling, Erik A., Heimberg, Alysha M., Gauthier, Jacques A., King, Benjamin L., Peterson, Kevin J.
Published in Biology letters (2005) (23.02.2012)
Published in Biology letters (2005) (23.02.2012)
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