SynergyFinder Plus: Toward Better Interpretation and Annotation of Drug Combination Screening Datasets
Zheng, Shuyu, Wang, Wenyu, Aldahdooh, Jehad, Malyutina, Alina, Shadbahr, Tolou, Tanoli, Ziaurrehman, Pessia, Alberto, Tang, Jing
Published in Genomics, proteomics & bioinformatics (01.06.2022)
Published in Genomics, proteomics & bioinformatics (01.06.2022)
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Journal Article
Drug combination sensitivity scoring facilitates the discovery of synergistic and efficacious drug combinations in cancer
Malyutina, Alina, Majumder, Muntasir Mamun, Wang, Wenyu, Pessia, Alberto, Heckman, Caroline A, Tang, Jing
Published in PLoS computational biology (01.05.2019)
Published in PLoS computational biology (01.05.2019)
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Journal Article
DrugComb: an integrative cancer drug combination data portal
Zagidullin, Bulat, Aldahdooh, Jehad, Zheng, Shuyu, Wang, Wenyu, Wang, Yinyin, Saad, Joseph, Malyutina, Alina, Jafari, Mohieddin, Tanoli, Ziaurrehman, Pessia, Alberto, Tang, Jing
Published in Nucleic acids research (02.07.2019)
Published in Nucleic acids research (02.07.2019)
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Journal Article
drda : An R Package for Dose-Response Data Analysis Using Logistic Functions
Malyutina, Alina, Tang, Jing, Pessia, Alberto
Published in Journal of statistical software (01.03.2023)
Published in Journal of statistical software (01.03.2023)
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Journal Article
Niacin Cures Systemic NAD+ Deficiency and Improves Muscle Performance in Adult-Onset Mitochondrial Myopathy
Pirinen, Eija, Auranen, Mari, Khan, Nahid A., Brilhante, Virginia, Urho, Niina, Pessia, Alberto, Hakkarainen, Antti, Kuula, Juho, Heinonen, Ulla, Schmidt, Mark S., Haimilahti, Kimmo, Piirilä, Päivi, Lundbom, Nina, Taskinen, Marja-Riitta, Brenner, Charles, Velagapudi, Vidya, Pietiläinen, Kirsi H., Suomalainen, Anu
Published in Cell metabolism (02.06.2020)
Published in Cell metabolism (02.06.2020)
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Journal Article
Host-Microbe Co-metabolism Dictates Cancer Drug Efficacy in C. elegans
Scott, Timothy A., Quintaneiro, Leonor M., Norvaisas, Povilas, Lui, Prudence P., Wilson, Matthew P., Leung, Kit-Yi, Herrera-Dominguez, Lucia, Sudiwala, Sonia, Pessia, Alberto, Clayton, Peter T., Bryson, Kevin, Velagapudi, Vidya, Mills, Philippa B., Typas, Athanasios, Greene, Nicholas D.E., Cabreiro, Filipe
Published in Cell (20.04.2017)
Published in Cell (20.04.2017)
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Journal Article
CLUH regulates mitochondrial metabolism by controlling translation and decay of target mRNAs
Schatton, Désirée, Pla-Martin, David, Marx, Marie-Charlotte, Hansen, Henriette, Mourier, Arnaud, Nemazanyy, Ivan, Pessia, Alberto, Zentis, Peter, Corona, Teresa, Kondylis, Vangelis, Barth, Esther, Schauss, Astrid C, Velagapudi, Vidya, Rugarli, Elena I
Published in The Journal of cell biology (06.03.2017)
Published in The Journal of cell biology (06.03.2017)
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Journal Article
Author Correction: Integrated targeted metabolomic and lipidomic analysis: A novel approach to classifying early cystic precursors to invasive pancreatic cancer
Gaiser, Rogier Aäron, Pessia, Alberto, Ateeb, Zeeshan, Davanian, Haleh, Moro, Carlos Fernández, Alkharaan, Hassan, Healy, Katie, Ghazi, Sam, Arnelo, Urban, Valente, Roberto, Velagapudi, Vidya, Chen, Margaret Sällberg, Del Chiaro, Marco
Published in Scientific reports (28.03.2022)
Published in Scientific reports (28.03.2022)
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Journal Article
CD73 contributes to anti‐inflammatory properties of afferent lymphatic endothelial cells in humans and mice
Eichin, Dominik, Pessia, Alberto, Takeda, Akira, Laakkonen, Joni, Bellmann, Lydia, Kankainen, Matti, Imhof, Beat A., Stoitzner, Patrizia, Tang, Jing, Salmi, Marko, Jalkanen, Sirpa
Published in European journal of immunology (01.01.2021)
Published in European journal of immunology (01.01.2021)
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Journal Article
Niacin Cures Systemic NAD+ Deficiency and Improves Muscle Performance in Adult-Onset Mitochondrial Myopathy
Pirinen, Eija, Auranen, Mari, Khan, Nahid A., Brilhante, Virginia, Urho, Niina, Pessia, Alberto, Hakkarainen, Antti, Ulla Heinonen, Juho Kuula, Schmidt, Mark S., Haimilahti, Kimmo, Piirilä, Päivi, Lundbom, Nina, Taskinen, Marja-Riitta, Brenner, Charles, Velagapudi, Vidya, Pietiläinen, Kirsi H., Suomalainen, Anu
Published in Cell metabolism (07.07.2020)
Published in Cell metabolism (07.07.2020)
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Journal Article
Salmonella Typhimurium impairs glycolysis-mediated acidification of phagosomes to evade macrophage defense
Gutiérrez, Saray, Fischer, Julia, Ganesan, Raja, Hos, Nina Judith, Cildir, Gökhan, Wolke, Martina, Pessia, Alberto, Frommolt, Peter, Desiderio, Vincenzo, Velagapudi, Vidya, Robinson, Nirmal
Published in PLoS pathogens (23.09.2021)
Published in PLoS pathogens (23.09.2021)
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Journal Article
Vascular adhesion protein-1 defines a unique subpopulation of human hematopoietic stem cells and regulates their proliferation
Iftakhar-e-Khuda, Imtiaz, Pessia, Alberto, Zheng, Shuyu, Kankainen, Matti, Kontro, Mika, Karikoski, Marika, Laurila, Juha, Gerke, Heidi, Tadayon, Sina, Hollmén, Maija, Tang, Jing, Imhof, Beat A., Salmi, Marko, Jalkanen, Sirpa
Published in Cellular and molecular life sciences : CMLS (01.12.2021)
Published in Cellular and molecular life sciences : CMLS (01.12.2021)
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Journal Article
Integrated targeted metabolomic and lipidomic analysis: A novel approach to classifying early cystic precursors to invasive pancreatic cancer
Gaiser, Rogier Aäron, Pessia, Alberto, Ateeb, Zeeshan, Davanian, Haleh, Fernández Moro, Carlos, Alkharaan, Hassan, Healy, Katie, Ghazi, Sam, Arnelo, Urban, Valente, Roberto, Velagapudi, Vidya, Sällberg Chen, Margaret, Del Chiaro, Marco
Published in Scientific reports (15.07.2019)
Published in Scientific reports (15.07.2019)
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Journal Article
Validation and Automation of a High-Throughput Multitargeted Method for Semiquantification of Endogenous Metabolites from Different Biological Matrices Using Tandem Mass Spectrometry
Nandania, Jatin, Peddinti, Gopal, Pessia, Alberto, Kokkonen, Meri, Velagapudi, Vidya
Published in Metabolites (05.08.2018)
Published in Metabolites (05.08.2018)
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Journal Article
mTORC1 Regulates Mitochondrial Integrated Stress Response and Mitochondrial Myopathy Progression
Khan, Nahid A., Nikkanen, Joni, Yatsuga, Shuichi, Jackson, Christopher, Wang, Liya, Pradhan, Swagat, Kivelä, Riikka, Pessia, Alberto, Velagapudi, Vidya, Suomalainen, Anu
Published in Cell metabolism (01.08.2017)
Published in Cell metabolism (01.08.2017)
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Journal Article
Faecal and Serum Metabolomics in Paediatric Inflammatory Bowel Disease
Kolho, Kaija-Leena, Pessia, Alberto, Jaakkola, Tytti, de Vos, Willem M, Velagapudi, Vidya
Published in Journal of Crohn's and colitis (01.03.2017)
Published in Journal of Crohn's and colitis (01.03.2017)
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Journal Article
Dense genomic sampling identifies highways of pneumococcal recombination
Chewapreecha, Claire, Harris, Simon R, Croucher, Nicholas J, Turner, Claudia, Marttinen, Pekka, Cheng, Lu, Pessia, Alberto, Aanensen, David M, Mather, Alison E, Page, Andrew J, Salter, Susannah J, Harris, David, Nosten, Francois, Goldblatt, David, Corander, Jukka, Parkhill, Julian, Turner, Paul, Bentley, Stephen D
Published in Nature genetics (01.03.2014)
Published in Nature genetics (01.03.2014)
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Journal Article
Surveillance of European Domestic Pig Populations Identifies an Emerging Reservoir of Potentially Zoonotic Swine Influenza A Viruses
Henritzi, Dinah, Petric, Philipp Peter, Lewis, Nicola Sarah, Graaf, Annika, Pessia, Alberto, Starick, Elke, Breithaupt, Angele, Strebelow, Günter, Luttermann, Christine, Parker, Larissa Mareike Kristin, Schröder, Charlotte, Hammerschmidt, Bärbel, Herrler, Georg, Beilage, Elisabeth große, Stadlbauer, Daniel, Simon, Viviana, Krammer, Florian, Wacheck, Silke, Pesch, Stefan, Schwemmle, Martin, Beer, Martin, Harder, Timm Clemens
Published in Cell host & microbe (07.10.2020)
Published in Cell host & microbe (07.10.2020)
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