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Published in Clinical microbiology reviews (01.07.2015)
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Simultaneous assay of every Salmonella Typhi gene using one million transposon mutants
Langridge, Gemma C, Phan, Minh-Duy, Turner, Daniel J, Perkins, Timothy T, Parts, Leopold, Haase, Jana, Charles, Ian, Maskell, Duncan J, Peters, Sarah E, Dougan, Gordon, Wain, John, Parkhill, Julian, Turner, A Keith
Published in Genome research (01.12.2009)
Published in Genome research (01.12.2009)
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A strand-specific RNA-Seq analysis of the transcriptome of the typhoid bacillus Salmonella typhi
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Published in PLoS genetics (01.07.2009)
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Sequence-based analysis uncovers an abundance of non-coding RNA in the total transcriptome of Mycobacterium tuberculosis
Arnvig, Kristine B, Comas, Iñaki, Thomson, Nicholas R, Houghton, Joanna, Boshoff, Helena I, Croucher, Nicholas J, Rose, Graham, Perkins, Timothy T, Parkhill, Julian, Dougan, Gordon, Young, Douglas B
Published in PLoS pathogens (01.11.2011)
Published in PLoS pathogens (01.11.2011)
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Differences in the population structure of Neisseria meningitidis in two Australian states: Victoria and Western Australia
Mowlaboccus, Shakeel, Mullally, Christopher A, Richmond, Peter C, Howden, Benjamin P, Stevens, Kerrie, Speers, David J, Keil, Anthony D, Bjørnstad, Ottar N, Perkins, Timothy T, Kahler, Charlene M
Published in PloS one (24.10.2017)
Published in PloS one (24.10.2017)
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ChIP‐seq and transcriptome analysis of the OmpR regulon of Salmonella enterica serovars Typhi and Typhimurium reveals accessory genes implicated in host colonization
Perkins, Timothy T., Davies, Mark R., Klemm, Elizabeth J., Rowley, Gary, Wileman, Thomas, James, Keith, Keane, Thomas, Maskell, Duncan, Hinton, Jay C. D., Dougan, Gordon, Kingsley, Robert A.
Published in Molecular microbiology (01.02.2013)
Published in Molecular microbiology (01.02.2013)
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Choosing a benchtop sequencing machine to characterise Helicobacter pylori genomes
Perkins, Timothy T, Tay, Chin Yen, Thirriot, Fanny, Marshall, Barry
Published in PloS one (28.06.2013)
Published in PloS one (28.06.2013)
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Temporal Changes in BEXSERO® Antigen Sequence Type Associated with Genetic Lineages of Neisseria meningitidis over a 15-Year Period in Western Australia
Mowlaboccus, Shakeel, Perkins, Timothy T, Smith, Helen, Sloots, Theo, Tozer, Sarah, Prempeh, Lydia-Jessica, Tay, Chin Yen, Peters, Fanny, Speers, David, Keil, Anthony D, Kahler, Charlene M
Published in PloS one (29.06.2016)
Published in PloS one (29.06.2016)
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Evaluation of the Cepheid Xpert C. difficile/Epi and meridian bioscience illumigene C. difficile assays for detecting Clostridium difficile ribotype 033 strains
Androga, Grace O, McGovern, Alan M, Elliott, Briony, Chang, Barbara J, Perkins, Timothy T, Foster, Niki F, Riley, Thomas V
Published in Journal of clinical microbiology (01.03.2015)
Published in Journal of clinical microbiology (01.03.2015)
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Acquisition of the capsule locus by horizontal gene transfer in Neisseria meningitidis is often accompanied by the loss of UDP-GalNAc synthesis
Bartley, Stephanie N., Mowlaboccus, Shakeel, Mullally, Christopher A., Stubbs, Keith A., Vrielink, Alice, Maiden, Martin C. J., Harrison, Odile B., Perkins, Timothy T., Kahler, Charlene M.
Published in Scientific reports (14.03.2017)
Published in Scientific reports (14.03.2017)
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Quantitative RNA-seq analysis of the Campylobacter jejuni transcriptome
CHAUDHURI, RoyR, LUYU, KANJI, Alpa, PERKINS, Timothy T, GARDNER, Paul P, CHOUDHARY, Jyoti, MASKELL, Duncan J, GRANT, Andrew J
Published in Microbiology (Society for General Microbiology) (01.10.2011)
Published in Microbiology (Society for General Microbiology) (01.10.2011)
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A simple method for directional transcriptome sequencing using Illumina technology
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Published in Nucleic acids research (01.12.2009)
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Quantum changes in Helicobacter pylori gene expression accompany host-adaptation
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Published in DNA research (01.02.2017)
Published in DNA research (01.02.2017)
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Temporal Changes in BEXSERO.sup.® Antigen Sequence Type Associated with Genetic Lineages of Neisseria meningitidis over a 15-Year Period in Western Australia
Mowlaboccus, Shakeel, Perkins, Timothy T, Smith, Helen, Sloots, Theo, Tozer, Sarah, Prempeh, Lydia-Jessica, Tay, Chin Yen, Peters, Fanny, Speers, David, Keil, Anthony D, Kahler, Charlene M
Published in PloS one (29.06.2016)
Published in PloS one (29.06.2016)
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Evaluation of the Cepheid Xpert C. difficile/ Epi and Meridian Bioscience illumi gene C. difficile Assays for Detecting Clostridium difficile Ribotype 033 Strains
Androga, Grace O., McGovern, Alan M., Elliott, Briony, Chang, Barbara J., Perkins, Timothy T., Foster, Niki F., Riley, Thomas V.
Published in Journal of clinical microbiology (01.03.2015)
Published in Journal of clinical microbiology (01.03.2015)
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Quantumchanges in Helicobacter pylori gene expression accompany host-adaptation
Chua, E-G, Wise, MJ, Khosravi, Y, Seow, S-W, Amoyo, AA, Pettersson, S, Peters, F, Tay, C-Y, Perkins, TT, Loke, M-F
Published in DNA research (01.02.2017)
Published in DNA research (01.02.2017)
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ChIP ‐seq and transcriptome analysis of the OmpR regulon of S almonella enterica serovars T yphi and T yphimurium reveals accessory genes implicated in host colonization
Perkins, Timothy T., Davies, Mark R., Klemm, Elizabeth J., Rowley, Gary, Wileman, Thomas, James, Keith, Keane, Thomas, Maskell, Duncan, Hinton, Jay C. D., Dougan, Gordon, Kingsley, Robert A.
Published in Molecular microbiology (01.02.2013)
Published in Molecular microbiology (01.02.2013)
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Choosing a Benchtop Sequencing Machine to Characterise Helicobacter pylori Genomes. e67539
Perkins, Timothy T, Tay, Chin Yen, Thirriot, Fanny, Marshall, Barry
Published in PloS one (01.06.2013)
Published in PloS one (01.06.2013)
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