An imputation platform to enhance integration of rice genetic resources
Wang, Diane R., Agosto-Pérez, Francisco J., Chebotarov, Dmytro, Shi, Yuxin, Marchini, Jonathan, Fitzgerald, Melissa, McNally, Kenneth L., Alexandrov, Nickolai, McCouch, Susan R.
Published in Nature communications (29.08.2018)
Published in Nature communications (29.08.2018)
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A MicroRNA Signature of Hypoxia
Kulshreshtha, Ritu, Ferracin, Manuela, Wojcik, Sylwia E., Garzon, Ramiro, Alder, Hansjuerg, Agosto-Perez, Francisco J., Davuluri, Ramana, Liu, Chang-Gong, Croce, Carlo M., Negrini, Massimo, Calin, George A., Ivan, Mircea
Published in Molecular and Cellular Biology (01.03.2007)
Published in Molecular and Cellular Biology (01.03.2007)
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POU2AF1 Functions in the Human Airway Epithelium To Regulate Expression of Host Defense Genes
Zhou, Haixia, Brekman, Angelika, Zuo, Wu-Lin, Ou, Xuemei, Shaykhiev, Renat, Agosto-Perez, Francisco J, Wang, Rui, Walters, Matthew S, Salit, Jacqueline, Strulovici-Barel, Yael, Staudt, Michelle R, Kaner, Robert J, Mezey, Jason G, Crystal, Ronald G, Wang, Guoqing
Published in The Journal of immunology (1950) (01.04.2016)
Published in The Journal of immunology (1950) (01.04.2016)
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Genome-wide mapping of RNA Pol-II promoter usage in mouse tissues by ChIP-seq
Sun, Hao, Wu, Jiejun, Wickramasinghe, Priyankara, Pal, Sharmistha, Gupta, Ravi, Bhattacharyya, Anirban, Agosto-Perez, Francisco J, Showe, Louise C, Huang, Tim H.-M, Davuluri, Ramana V
Published in Nucleic acids research (01.01.2011)
Published in Nucleic acids research (01.01.2011)
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An integrative ChIP-chip and gene expression profiling to model SMAD regulatory modules
Qin, Huaxia, Chan, Michael W Y, Liyanarachchi, Sandya, Balch, Curtis, Potter, Dustin, Souriraj, Irene J, Cheng, Alfred S L, Agosto-Perez, Francisco J, Nikonova, Elena V, Yan, Pearlly S, Lin, Huey-Jen, Nephew, Kenneth P, Saltz, Joel H, Showe, Louise C, Huang, Tim H M, Davuluri, Ramana V
Published in BMC systems biology (17.07.2009)
Published in BMC systems biology (17.07.2009)
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Open access resources for genome-wide association mapping in rice
McCouch, Susan R., Wright, Mark H., Tung, Chih-Wei, Maron, Lyza G., McNally, Kenneth L., Fitzgerald, Melissa, Singh, Namrata, DeClerck, Genevieve, Agosto-Perez, Francisco, Korniliev, Pavel, Greenberg, Anthony J., Naredo, Ma. Elizabeth B., Mercado, Sheila Mae Q., Harrington, Sandra E., Shi, Yuxin, Branchini, Darcy A., Kuser-Falcão, Paula R., Leung, Hei, Ebana, Kowaru, Yano, Masahiro, Eizenga, Georgia, McClung, Anna, Mezey, Jason
Published in Nature communications (04.02.2016)
Published in Nature communications (04.02.2016)
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An improved 7K SNP array, the C7AIR, provides a wealth of validated SNP markers for rice breeding and genetics studies
Morales, Karina Y, Singh, Namrata, Perez, Francisco Agosto, Ignacio, John Carlos, Thapa, Ranjita, Arbelaez, Juan D, Tabien, Rodante E, Famoso, Adam, Wang, Diane R, Septiningsih, Endang M, Shi, Yuxin, Kretzschmar, Tobias, McCouch, Susan R, Thomson, Michael J
Published in PloS one (14.05.2020)
Published in PloS one (14.05.2020)
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Indigenous Arabs are descendants of the earliest split from ancient Eurasian populations
Rodriguez-Flores, Juan L, Fakhro, Khalid, Agosto-Perez, Francisco, Ramstetter, Monica D, Arbiza, Leonardo, Vincent, Thomas L, Robay, Amal, Malek, Joel A, Suhre, Karsten, Chouchane, Lotfi, Badii, Ramin, Al-Nabet Al-Marri, Ajayeb, Abi Khalil, Charbel, Zirie, Mahmoud, Jayyousi, Amin, Salit, Jacqueline, Keinan, Alon, Clark, Andrew G, Crystal, Ronald G, Mezey, Jason G
Published in Genome research (01.02.2016)
Published in Genome research (01.02.2016)
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Large-scale deployment of a rice 6 K SNP array for genetics and breeding applications
Thomson, Michael J., Singh, Namrata, Dwiyanti, Maria S., Wang, Diane R., Wright, Mark H., Perez, Francisco Agosto, DeClerck, Genevieve, Chin, Joong Hyoun, Malitic-Layaoen, Geraldine A., Juanillas, Venice Margarette, Dilla-Ermita, Christine J., Mauleon, Ramil, Kretzschmar, Tobias, McCouch, Susan R.
Published in Rice (New York, N.Y.) (30.08.2017)
Published in Rice (New York, N.Y.) (30.08.2017)
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MPromDb update 2010: an integrated resource for annotation and visualization of mammalian gene promoters and ChIP-seq experimental data
Gupta, Ravi, Bhattacharyya, Anirban, Agosto-Perez, Francisco J, Wickramasinghe, Priyankara, Davuluri, Ramana V
Published in Nucleic acids research (01.01.2011)
Published in Nucleic acids research (01.01.2011)
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Smoking dysregulates the human airway basal cell transcriptome at COPD risk locus 19q13.2
Ryan, Dorothy M, Vincent, Thomas L, Salit, Jacqueline, Walters, Matthew S, Agosto-Perez, Francisco, Shaykhiev, Renat, Strulovici-Barel, Yael, Downey, Robert J, Buro-Auriemma, Lauren J, Staudt, Michelle R, Hackett, Neil R, Mezey, Jason G, Crystal, Ronald G
Published in PloS one (03.02.2014)
Published in PloS one (03.02.2014)
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Multiple Small-Effect Alleles of Indica Origin Enhance High Iron-Associated Stress Tolerance in Rice Under Field Conditions in West Africa
Melandri, Giovanni, Sikirou, Mouritala, Arbelaez, Juan D, Shittu, Afeez, Semwal, Vimal K, Konaté, Kadougoudiou A, Maji, Alhassan T, Ngaujah, Steven A, Akintayo, Inoussa, Govindaraj, Vishnu, Shi, Yuxin, Agosto-Peréz, Francisco J, Greenberg, Anthony J, Atlin, Gary, Ramaiah, Venuprasad, McCouch, Susan R
Published in Frontiers in plant science (15.01.2021)
Published in Frontiers in plant science (15.01.2021)
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Exome Sequencing Identifies Potential Risk Variants for Mendelian Disorders at High Prevalence in Qatar
Rodriguez-Flores, Juan L., Fakhro, Khalid, Hackett, Neil R., Salit, Jacqueline, Fuller, Jennifer, Agosto-Perez, Francisco, Gharbiah, Maey, Malek, Joel A., Zirie, Mahmoud, Jayyousi, Amin, Badii, Ramin, Al-Nabet Al-Marri, Ajayeb, Chouchane, Lotfi, Stadler, Dora J., Mezey, Jason G., Crystal, Ronald G.
Published in Human mutation (01.01.2014)
Published in Human mutation (01.01.2014)
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Pulmonary Abnormalities in Young, Light-Use Waterpipe (Hookah) Smokers
Strulovici-Barel, Yael, Shaykhiev, Renat, Salit, Jacqueline, Deeb, Ruba S, Krause, Anja, Kaner, Robert J, Vincent, Thomas L, Agosto-Perez, Francisco, Wang, Guoqing, Hollmann, Charleen, Shanmugam, Vignesh, Almulla, Ahmad M, Sattar, Hisham, Mahmoud, Mai, Mezey, Jason G, Gross, Steven S, Staudt, Michelle R, Walters, Matthew S, Crystal, Ronald G
Published in American journal of respiratory and critical care medicine (01.09.2016)
Published in American journal of respiratory and critical care medicine (01.09.2016)
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Correction: Corrigendum: Open access resources for genome-wide association mapping in rice
McCouch, Susan R., Wright, Mark H., Tung, Chih-Wei, Maron, Lyza G., McNally, Kenneth L., Fitzgerald, Melissa, Singh, Namrata, DeClerck, Genevieve, Perez, Francisco Agosto, Korniliev, Pavel, Greenberg, Anthony J., Naredo, Ma. Elizabeth B., Mercado, Sheila Mae Q., Harrington, Sandra E., Shi, Yuxin, Branchini, Darcy A., Kuser-Falcão, Paula R., Leung, Hei, Ebana, Kowaru, Yano, Masahiro, Eizenga, Georgia, McClung, Anna, Mezey, Jason
Published in Nature communications (20.04.2016)
Published in Nature communications (20.04.2016)
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Epigenetic repression of the estrogen-regulated Homeobox B13 gene in breast cancer
Rodriguez, Benjamin A.T., Cheng, Alfred S.L., Yan, Pearlly S., Potter, Dustin, Agosto-Perez, Francisco J., Shapiro, Charles L., Huang, Tim H.-M.
Published in Carcinogenesis (New York) (01.07.2008)
Published in Carcinogenesis (New York) (01.07.2008)
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Cigarette Smoking Induces Changes in Airway Epithelial Expression of Genes Associated with Monogenic Lung Disorders
Tilley, Ann E, Staudt, Michelle R, Salit, Jacqueline, Van de Graaf, Benjamin, Strulovici-Barel, Yael, Kaner, Robert J, Vincent, Thomas, Agosto-Perez, Francisco, Mezey, Jason G, Raby, Benjamin A, Crystal, Ronald G
Published in American journal of respiratory and critical care medicine (15.01.2016)
Published in American journal of respiratory and critical care medicine (15.01.2016)
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Copy number variations in the genome of the Qatari population
Fakhro, Khalid A, Yousri, Noha A, Rodriguez-Flores, Juan L, Robay, Amal, Staudt, Michelle R, Agosto-Perez, Francisco, Salit, Jacqueline, Malek, Joel A, Suhre, Karsten, Jayyousi, Amin, Zirie, Mahmoud, Stadler, Dora, Mezey, Jason G, Crystal, Ronald G
Published in BMC genomics (22.10.2015)
Published in BMC genomics (22.10.2015)
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