Exaggerated false positives by popular differential expression methods when analyzing human population samples
Li, Yumei, Ge, Xinzhou, Peng, Fanglue, Li, Wei, Li, Jingyi Jessica
Published in Genome Biology (15.03.2022)
Published in Genome Biology (15.03.2022)
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Adaptive endoplasmic reticulum stress signalling via IRE1α–XBP1 preserves self-renewal of haematopoietic and pre-leukaemic stem cells
Liu, Lu, Zhao, Meiling, Jin, Xi, Ney, Gina, Yang, Kevin B, Peng, Fanglue, Cao, Jin, Iwawaki, Takao, Del Valle, Juan, Chen, Xi, Li, Qing
Published in Nature cell biology (01.03.2019)
Published in Nature cell biology (01.03.2019)
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An atlas of alternative polyadenylation quantitative trait loci contributing to complex trait and disease heritability
Li, Lei, Huang, Kai-Lieh, Gao, Yipeng, Cui, Ya, Wang, Gao, Elrod, Nathan D., Li, Yumei, Chen, Yiling Elaine, Ji, Ping, Peng, Fanglue, Russell, William K., Wagner, Eric J., Li, Wei
Published in Nature genetics (01.07.2021)
Published in Nature genetics (01.07.2021)
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Protein quality control through endoplasmic reticulum-associated degradation maintains haematopoietic stem cell identity and niche interactions
Xu, Longyong, Liu, Xia, Peng, Fanglue, Zhang, Weijie, Zheng, Liting, Ding, Yao, Gu, Tianpeng, Lv, Kaosheng, Wang, Jin, Ortinau, Laura, Hu, Tianyuan, Shi, Xiangguo, Shi, Guojun, Shang, Ge, Sun, Shengyi, Iwawaki, Takao, Ji, Yewei, Li, Wei, Rosen, Jeffrey M., Zhang, Xiang H.-F., Park, Dongsu, Adoro, Stanley, Catic, Andre, Tong, Wei, Qi, Ling, Nakada, Daisuke, Chen, Xi
Published in Nature cell biology (01.10.2020)
Published in Nature cell biology (01.10.2020)
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Notch-induced endoplasmic reticulum-associated degradation governs mouse thymocyte β-selection
Liu, Xia, Yu, Jingjing, Xu, Longyong, Umphred-Wilson, Katharine, Peng, Fanglue, Ding, Yao, Barton, Brendan M, Lv, Xiangdong, Zhao, Michael Y, Sun, Shengyi, Hong, Yuning, Qi, Ling, Adoro, Stanley, Chen, Xi
Published in eLife (09.07.2021)
Published in eLife (09.07.2021)
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Alternative polyadenylation transcriptome-wide association study identifies APA-linked susceptibility genes in brain disorders
Cui, Ya, Arnold, Frederick J., Peng, Fanglue, Wang, Dan, Li, Jason Sheng, Michels, Sebastian, Wagner, Eric J., La Spada, Albert R., Li, Wei
Published in Nature communications (03.02.2023)
Published in Nature communications (03.02.2023)
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Journal Article
3′aQTL-atlas: an atlas of 3′UTR alternative polyadenylation quantitative trait loci across human normal tissues
Cui, Ya, Peng, Fanglue, Wang, Dan, Li, Yumei, Li, Jason Sheng, Li, Lei, Li, Wei
Published in Nucleic acids research (07.01.2022)
Published in Nucleic acids research (07.01.2022)
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DORGE: Discovery of Oncogenes and tumoR suppressor genes using Genetic and Epigenetic features
Lyu, Jie, Li, Jingyi Jessica, Su, Jianzhong, Peng, Fanglue, Chen, Yiling Elaine, Ge, Xinzhou, Li, Wei
Published in Science advances (01.11.2020)
Published in Science advances (01.11.2020)
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Modulation of the proteostasis network promotes tumor resistance to oncogenic KRAS inhibitors
Lv, Xiangdong, Lu, Xuan, Cao, Jin, Luo, Qin, Ding, Yao, Peng, Fanglue, Pataer, Apar, Lu, Dong, Han, Dong, Malmberg, Eric, Chan, Doug W, Wang, Xiaoran, Savage, Sara R, Mao, Sufeng, Yu, Jingjing, Peng, Fei, Yan, Liang, Meng, Huan, Maneix, Laure, Han, Yumin, Chen, Yiwen, Yao, Wantong, Chang, Eric C, Catic, Andre, Lin, Xia, Miles, George, Huang, Pengxiang, Sun, Zheng, Burt, Bryan, Wang, Huamin, Wang, Jin, Yao, Qizhi Cathy, Zhang, Bing, Roth, Jack A, O'Malley, Bert W, Ellis, Matthew J, Rimawi, Mothaffar F, Ying, Haoqiang, Chen, Xi
Published in Science (American Association for the Advancement of Science) (08.09.2023)
Published in Science (American Association for the Advancement of Science) (08.09.2023)
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STAT5 confers lactogenic properties in breast tumorigenesis and restricts metastatic potential
Lin, Meng, Ku, Amy T., Dong, Jie, Yue, Fei, Jiang, Weiyu, Ibrahim, Ahmed Atef, Peng, Fanglue, Creighton, Chad J., Nagi, Chandandeep, Gutierrez, Carolina, Rosen, Jeffrey M., Zhang, Xiang H.-F., Hilsenbeck, Susan G., Chen, Xi, Du, Yi-Chieh Nancy, Huang, Shixia, Shi, Aiping, Fan, Zhimin, Li, Yi
Published in Oncogene (25.11.2022)
Published in Oncogene (25.11.2022)
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IRE1α silences dsRNA to prevent taxane-induced pyroptosis in triple-negative breast cancer
Xu, Longyong, Peng, Fanglue, Luo, Qin, Ding, Yao, Yuan, Fei, Zheng, Liting, He, Wei, Zhang, Sophie S., Fu, Xin, Liu, Jin, Mutlu, Ayse Sena, Wang, Shuyue, Nehring, Ralf Bernd, Li, Xingyu, Tang, Qianzi, Li, Catherine, Lv, Xiangdong, Dobrolecki, Lacey E., Zhang, Weijie, Han, Dong, Zhao, Na, Jaehnig, Eric, Wang, Jingyi, Wu, Weiche, Graham, Davis A., Li, Yumei, Chen, Rui, Peng, Weiyi, Chen, Yiwen, Catic, Andre, Zhang, Zhibin, Zhang, Bing, Mustoe, Anthony M., Koong, Albert C., Miles, George, Lewis, Michael T., Wang, Meng C., Rosenberg, Susan M., O’Malley, Bert W., Westbrook, Thomas F., Xu, Han, Zhang, Xiang H.-F., Osborne, C. Kent, Li, Jin Billy, Ellis, Matthew J., Rimawi, Mothaffar F., Rosen, Jeffrey M., Chen, Xi
Published in Cell (14.10.2024)
Published in Cell (14.10.2024)
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Journal Article
3'aQTL-atlas: an atlas of 3'UTR alternative polyadenylation quantitative trait loci across human normal tissues
Cui, Ya, Peng, Fanglue, Wang, Dan, Li, Yumei, Li, Jason Sheng, Li, Lei, Li, Wei
Published in Nucleic acids research (07.01.2022)
Published in Nucleic acids research (07.01.2022)
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Journal Article
Protein Quality Control Through Endoplasmic Reticulum-Associated Degradation Maintains Hematopoietic Stem Cell Identity and Niche Interactions
Xu, Longyong, Liu, Xia, Peng, Fanglue, Zhang, Weijie, Zheng, Liting, Ding, Yao, Gu, Tianpeng, Lv, Kaosheng, Wang, Jin, Ortinau, Laura, Hu, Tianyuan, Shi, Xiangguo, Shi, Guojun, Shang, Ge, Sun, Shengyi, Iwawaki, Takao, Ji, Yewei, Li, Wei, Rosen, Jeffrey M., Zhang, Xiang H.-F., Park, Dongsu, Adoro, Stanley, Catic, Andre, Tong, Wei, Qi, Ling, Nakada, Daisuke, Chen, Xi
Published in Nature cell biology (21.09.2020)
Published in Nature cell biology (21.09.2020)
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Journal Article
Notch-induced endoplasmic reticulum-associated degradation governs mouse thymocyte [beta]-selection
Liu, Xia, Yu, Jingjing, Xu, Longyong, Umphred-Wilson, Katharine, Peng, Fanglue, Ding, Yao, Barton, Brendan M, Lv, Xiangdong, Zhao, Michael Y, Sun, Shengyi, Hong, Yuning, Qi, Ling, Adoro, Stanley, Chen, Xi
Published in eLife (09.07.2021)
Published in eLife (09.07.2021)
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