Enhancer histone-QTLs are enriched on autoimmune risk haplotypes and influence gene expression within chromatin networks
Pelikan, Richard C, Kelly, Jennifer A, Fu, Yao, Lareau, Caleb A, Tessneer, Kandice L, Wiley, Graham B, Wiley, Mandi M, Glenn, Stuart B, Harley, John B, Guthridge, Joel M, James, Judith A, Aryee, Martin J, Montgomery, Courtney, Gaffney, Patrick M
Published in Nature communications (25.07.2018)
Published in Nature communications (25.07.2018)
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Journal Article
Single Cell Transcriptomics Implicate Novel Monocyte and T Cell Immune Dysregulation in Sarcoidosis
Garman, Lori, Pelikan, Richard C, Rasmussen, Astrid, Lareau, Caleb A, Savoy, Kathryn A, Deshmukh, Umesh S, Bagavant, Harini, Levin, Albert M, Daouk, Salim, Drake, Wonder P, Montgomery, Courtney G
Published in Frontiers in immunology (08.12.2020)
Published in Frontiers in immunology (08.12.2020)
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Journal Article
Systemic lupus erythematosus variants modulate the function of an enhancer upstream of TNFAIP3
Pasula, Satish, Gopalakrishnan, Jaanam, Fu, Yao, Tessneer, Kandice L, Wiley, Mandi M, Pelikan, Richard C, Kelly, Jennifer A, Gaffney, Patrick M
Published in Frontiers in genetics (19.09.2022)
Published in Frontiers in genetics (19.09.2022)
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Journal Article
Massively parallel reporter assay confirms regulatory potential of hQTLs and reveals important variants in lupus and other autoimmune diseases
Fu, Yao, Kelly, Jennifer A., Gopalakrishnan, Jaanam, Pelikan, Richard C., Tessneer, Kandice L., Pasula, Satish, Grundahl, Kiely, Murphy, David A., Gaffney, Patrick M.
Published in HGG advances (11.04.2024)
Published in HGG advances (11.04.2024)
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Journal Article
Modulation of lipid metabolic defects rescues cleft palate in Tgfbr2 mutant mice
Iwata, Junichi, Suzuki, Akiko, Pelikan, Richard C, Ho, Thach-Vu, Sanchez-Lara, Pedro A, Chai, Yang
Published in Human molecular genetics (01.01.2014)
Published in Human molecular genetics (01.01.2014)
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Journal Article
WNT/β-Catenin Signaling Regulates Multiple Steps of Myogenesis by Regulating Step-Specific Targets
Suzuki, Akiko, Pelikan, Richard C., Iwata, Junichi
Published in Molecular and cellular biology (01.05.2015)
Published in Molecular and cellular biology (01.05.2015)
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Journal Article
Novel ovarian cancer maintenance therapy targeted at mortalin and mutant p53
Ramraj, Satish K., Elayapillai, Sugantha P., Pelikan, Richard C., Zhao, Yan D., Isingizwe, Zitha R., Kennedy, Amy L., Lightfoot, Stanley A., Benbrook, Doris M.
Published in International journal of cancer (15.08.2020)
Published in International journal of cancer (15.08.2020)
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Journal Article
Variants on the UBE2L3/YDJC Autoimmune Disease Risk Haplotype Increase UBE2L3 Expression by Modulating CCCTC‐Binding Factor and YY1 Binding
Gopalakrishnan, Jaanam, Tessneer, Kandice L., Fu, Yao, Pasula, Satish, Pelikan, Richard C., Kelly, Jennifer A., Wiley, Graham B., Gaffney, Patrick M.
Published in Arthritis & rheumatology (Hoboken, N.J.) (01.01.2022)
Published in Arthritis & rheumatology (Hoboken, N.J.) (01.01.2022)
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Journal Article
Smad4-Irf6 genetic interaction and TGFβ-mediated IRF6 signaling cascade are crucial for palatal fusion in mice
Iwata, Jun-ichi, Suzuki, Akiko, Pelikan, Richard C, Ho, Thach-Vu, Sanchez-Lara, Pedro A, Urata, Mark, Dixon, Michael J, Chai, Yang
Published in Development (Cambridge) (15.03.2013)
Published in Development (Cambridge) (15.03.2013)
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Journal Article
Noncanonical Transforming Growth Factor β (TGFβ) Signaling in Cranial Neural Crest Cells Causes Tongue Muscle Developmental Defects
Iwata, Jun-ichi, Suzuki, Akiko, Pelikan, Richard C., Ho, Thach-Vu, Chai, Yang
Published in The Journal of biological chemistry (11.10.2013)
Published in The Journal of biological chemistry (11.10.2013)
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Journal Article
Role of Systemic Lupus Erythematosus Risk Variants With Opposing Functional Effects as a Driver of Hypomorphic Expression of TNIP1 and Other Genes Within a Three‐Dimensional Chromatin Network
Pasula, Satish, Tessneer, Kandice L., Fu, Yao, Gopalakrishnan, Jaanam, Pelikan, Richard C., Kelly, Jennifer A., Wiley, Graham B., Wiley, Mandi M., Gaffney, Patrick M.
Published in Arthritis & rheumatology (Hoboken, N.J.) (01.05.2020)
Published in Arthritis & rheumatology (Hoboken, N.J.) (01.05.2020)
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Journal Article
Single-cell analysis of glandular T cell receptors in Sjögren's syndrome
Joachims, Michelle L, Leehan, Kerry M, Lawrence, Christina, Pelikan, Richard C, Moore, Jacen S, Pan, Zijian, Rasmussen, Astrid, Radfar, Lida, Lewis, David M, Grundahl, Kiely M, Kelly, Jennifer A, Wiley, Graham B, Shugay, Mikhail, Chudakov, Dmitriy M, Lessard, Christopher J, Stone, Donald U, Scofield, R Hal, Montgomery, Courtney G, Sivils, Kathy L, Thompson, Linda F, Farris, A Darise
Published in JCI insight (02.06.2016)
Published in JCI insight (02.06.2016)
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Mutated KLF4(K409Q) in meningioma binds STRs and activates FGF3 gene expression
Tsytsykova, Alla V., Wiley, Graham, Li, Chuang, Pelikan, Richard C., Garman, Lori, Acquah, Francis A., Mooers, Blaine H.M., Tsitsikov, Erdyni N., Dunn, Ian F.
Published in iScience (19.08.2022)
Published in iScience (19.08.2022)
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Journal Article
Variants on the UBE2L3-YDJC autoimmune disease risk haplotype increase UBE2L3 gene expression by modulating CTCF and YY1 binding
Gopalakrishnan, Jaanam, Tessneer, Kandice L., Fu, Yao, Pasula, Satish, Pelikan, Richard C., Kelly, Jennifer A., Wiley, Graham B., Gaffney, Patrick M.
Published in Arthritis & rheumatology (Hoboken, N.J.) (13.12.2021)
Published in Arthritis & rheumatology (Hoboken, N.J.) (13.12.2021)
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Journal Article
Role of Systemic Lupus Erythematosus Risk Variants With Opposing Functional Effects as a Driver of Hypomorphic Expression of TNIP 1 and Other Genes Within a Three‐Dimensional Chromatin Network
Pasula, Satish, Tessneer, Kandice L., Fu, Yao, Gopalakrishnan, Jaanam, Pelikan, Richard C., Kelly, Jennifer A., Wiley, Graham B., Wiley, Mandi M., Gaffney, Patrick M.
Published in Arthritis & rheumatology (Hoboken, N.J.) (01.05.2020)
Published in Arthritis & rheumatology (Hoboken, N.J.) (01.05.2020)
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Journal Article
Risk Variants with Opposing Functional Effects Result in Hypomorphic Expression of TNIP1 and Other Genes within a 3D Chromatin Network
Pasula, Satish, Tessneer, Kandice L., Fu, Yao, Gopalakrishnan, Jaanam, Pelikan, Richard C., Kelly, Jennifer A., Wiley, Graham B., Wiley, Mandi M., Gaffney, Patrick M.
Published in Arthritis & rheumatology (Hoboken, N.J.) (30.03.2020)
Published in Arthritis & rheumatology (Hoboken, N.J.) (30.03.2020)
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