Rapid Nanopore Sequencing of Plasmids and Resistance Gene Detection in Clinical Isolates
Lemon, Jamie K, Khil, Pavel P, Frank, Karen M, Dekker, John P
Published in Journal of clinical microbiology (01.12.2017)
Published in Journal of clinical microbiology (01.12.2017)
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Journal Article
Integrated transcriptome analysis of mouse spermatogenesis
Margolin, Gennady, Khil, Pavel P, Kim, Joongbaek, Bellani, Marina A, Camerini-Otero, R Daniel
Published in BMC genomics (18.01.2014)
Published in BMC genomics (18.01.2014)
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Journal Article
Hypermutator strains of Pseudomonas aeruginosa reveal novel pathways of resistance to combinations of cephalosporin antibiotics and beta-lactamase inhibitors
Dulanto Chiang, Augusto, Patil, Prashant P, Beka, Lidia, Youn, Jung-Ho, Launay, Adrien, Bonomo, Robert A, Khil, Pavel P, Dekker, John P
Published in PLoS biology (18.11.2022)
Published in PLoS biology (18.11.2022)
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Journal Article
Sensitive mapping of recombination hotspots using sequencing-based detection of ssDNA
Khil, Pavel P, Smagulova, Fatima, Brick, Kevin M, Camerini-Otero, R Daniel, Petukhova, Galina V
Published in Genome research (01.05.2012)
Published in Genome research (01.05.2012)
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Journal Article
Roving methyltransferases generate a mosaic epigenetic landscape and influence evolution in Bacteroides fragilis group
Tisza, Michael J., Smith, Derek D. N., Clark, Andrew E., Youn, Jung-Ho, Khil, Pavel P., Dekker, John P.
Published in Nature communications (10.07.2023)
Published in Nature communications (10.07.2023)
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Journal Article
Dynamic Emergence of Mismatch Repair Deficiency Facilitates Rapid Evolution of Ceftazidime-Avibactam Resistance in Pseudomonas aeruginosa Acute Infection
Khil, Pavel P, Dulanto Chiang, Augusto, Ho, Jonathan, Youn, Jung-Ho, Lemon, Jamie K, Gea-Banacloche, Juan, Frank, Karen M, Parta, Mark, Bonomo, Robert A, Dekker, John P
Published in mBio (17.09.2019)
Published in mBio (17.09.2019)
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Journal Article
Genomic insights into the host specific adaptation of the Pneumocystis genus
Cissé, Ousmane H., Ma, Liang, Dekker, John P., Khil, Pavel P., Youn, Jung-Ho, Brenchley, Jason M., Blair, Robert, Pahar, Bapi, Chabé, Magali, Van Rompay, Koen K. A., Keesler, Rebekah, Sukura, Antti, Hirsch, Vanessa, Kutty, Geetha, Liu, Yueqin, Peng, Li, Chen, Jie, Song, Jun, Weissenbacher-Lang, Christiane, Xu, Jie, Upham, Nathan S., Stajich, Jason E., Cuomo, Christina A., Cushion, Melanie T., Kovacs, Joseph A.
Published in Communications biology (08.03.2021)
Published in Communications biology (08.03.2021)
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Journal Article
Characterization of the DNA Damage-inducible Helicase DinG from Escherichia coli
Voloshin, Oleg N., Vanevski, Filip, Khil, Pavel P., Camerini-Otero, R.Daniel
Published in The Journal of biological chemistry (25.07.2003)
Published in The Journal of biological chemistry (25.07.2003)
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Journal Article
ACKR1 Alleles at 5.6 kb in a Well-Characterized Renewable US Food and Drug Administration (FDA) Reference Panel for Standardization of Blood Group Genotyping
Srivastava, Kshitij, Khil, Pavel P., Sippert, Emilia, Volkova, Evgeniya, Dekker, John P., Rios, Maria, Flegel, Willy A.
Published in The Journal of molecular diagnostics : JMD (01.10.2020)
Published in The Journal of molecular diagnostics : JMD (01.10.2020)
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Journal Article
Pooled Testing for Surveillance of SARS-CoV-2 in Asymptomatic Individuals
Das, Sanchita, Lau, Anna F., Youn, Jung-Ho, Khil, Pavel P., Zelazny, Adrian M., Frank, Karen M.
Published in Journal of clinical virology (01.11.2020)
Published in Journal of clinical virology (01.11.2020)
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Journal Article
Crystal structure of the Escherichia coli YcdX protein reveals a trinuclear zinc active site
Teplyakov, Alexey, Obmolova, Galina, Khil, Pavel P., Howard, Andrew J., Camerini-Otero, R. Daniel, Gilliland, Gary L.
Published in Proteins, structure, function, and bioinformatics (01.05.2003)
Published in Proteins, structure, function, and bioinformatics (01.05.2003)
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Journal Article
Comparative Population Genomics Analysis of the Mammalian Fungal Pathogen Pneumocystis
Cissé, Ousmane H, Ma, Liang, Wei Huang, Da, Khil, Pavel P, Dekker, John P, Kutty, Geetha, Bishop, Lisa, Liu, Yueqin, Deng, Xilong, Hauser, Philippe M, Pagni, Marco, Hirsch, Vanessa, Lempicki, Richard A, Stajich, Jason E, Cuomo, Christina A, Kovacs, Joseph A
Published in mBio (08.05.2018)
Published in mBio (08.05.2018)
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Journal Article
Severe BCG-osis Misdiagnosed as Multidrug-Resistant Tuberculosis in an IL-12Rβ1-Deficient Peruvian Girl
Esteve-Sole, Ana, Sánchez-Dávila, Suly P., Deyà-Martínez, Angela, Freeman, Alexandra F., Zelazny, Adrian M., Dekker, John P., Khil, Pavel P., Holland, Steven M., Noguera-Julian, Antoni, Bustamante, Jacinta, Casanova, Jean-Laurent, Juan, Manel, Cordova, Wilmer, Alsina, Laia
Published in Journal of clinical immunology (01.08.2018)
Published in Journal of clinical immunology (01.08.2018)
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Journal Article
Protracted course of disseminated adenovirus disease with necrotizing granulomas in the liver
Lerner, Andrea M., Bennett, John E., Pittaluga, Stefania, Khil, Pavel P., Youn, JH, Fahle, Gary A., Frank, Karen M., Dekker, John P., Jerussi, Theresa D., Sun, Clare, Wiestner, Adrian, Gea-Banacloche, Juan
Published in Diagnostic microbiology and infectious disease (01.06.2019)
Published in Diagnostic microbiology and infectious disease (01.06.2019)
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Journal Article
Disseminated Mycoplasma Orale Infection in Patients With Phosphoinositide-3-Kinase Regulatory Subunit 1 Mutations
Totten, Arthur H, Uzel, Gulbu, Khil, Pavel P, Youn, Jung-Ho, Treat, Jennifer, Soutar, Craig D, Holland, Steven M, Dekker, John P, Zerbe, Christa S
Published in Open forum infectious diseases (01.09.2022)
Published in Open forum infectious diseases (01.09.2022)
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Journal Article