An amplicon-based sequencing framework for accurately measuring intrahost virus diversity using PrimalSeq and iVar
Grubaugh, Nathan D, Gangavarapu, Karthik, Quick, Joshua, Matteson, Nathaniel L, De Jesus, Jaqueline Goes, Main, Bradley J, Tan, Amanda L, Paul, Lauren M, Brackney, Doug E, Grewal, Saran, Gurfield, Nikos, Van Rompay, Koen K A, Isern, Sharon, Michael, Scott F, Coffey, Lark L, Loman, Nicholas J, Andersen, Kristian G
Published in Genome Biology (08.01.2019)
Published in Genome Biology (08.01.2019)
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Field-deployable viral diagnostics using CRISPR-Cas13
Myhrvold, Cameron, Freije, Catherine A, Gootenberg, Jonathan S, Abudayyeh, Omar O, Metsky, Hayden C, Durbin, Ann F, Kellner, Max J, Tan, Amanda L, Paul, Lauren M, Parham, Leda A, Garcia, Kimberly F, Barnes, Kayla G, Chak, Bridget, Mondini, Adriano, Nogueira, Mauricio L, Isern, Sharon, Michael, Scott F, Lorenzana, Ivette, Yozwiak, Nathan L, MacInnis, Bronwyn L, Bosch, Irene, Gehrke, Lee, Zhang, Feng, Sabeti, Pardis C
Published in Science (American Association for the Advancement of Science) (27.04.2018)
Published in Science (American Association for the Advancement of Science) (27.04.2018)
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Travel surveillance uncovers dengue virus dynamics and introductions in the Caribbean
Taylor-Salmon, Emma, Hill, Verity, Paul, Lauren M., Koch, Robert T., Breban, Mallery I., Chaguza, Chrispin, Sodeinde, Afeez, Warren, Joshua L., Bunch, Sylvia, Cano, Natalia, Cone, Marshall, Eysoldt, Sarah, Garcia, Alezaundra, Gilles, Nicadia, Hagy, Andrew, Heberlein, Lea, Jaber, Rayah, Kassens, Elizabeth, Colarusso, Pamela, Davis, Amanda, Baudin, Samantha, Rico, Edhelene, Mejía-Echeverri, Álvaro, Scott, Blake, Stanek, Danielle, Zimler, Rebecca, Muñoz-Jordán, Jorge L., Santiago, Gilberto A., Adams, Laura E., Paz-Bailey, Gabriela, Spillane, Melanie, Katebi, Volha, Paulino-Ramírez, Robert, Mueses, Sayira, Peguero, Armando, Sánchez, Nelissa, Norman, Francesca F., Galán, Juan-Carlos, Huits, Ralph, Hamer, Davidson H., Vogels, Chantal B. F., Morrison, Andrea, Michael, Scott F., Grubaugh, Nathan D.
Published in Nature communications (25.04.2024)
Published in Nature communications (25.04.2024)
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Introduction and Spread of Dengue Virus 3, Florida, USA, May 2022-April 2023
Jones, Forrest K, Morrison, Andrea M, Santiago, Gilberto A, Rysava, Kristyna, Zimler, Rebecca A, Heberlein, Lea A, Kopp, Edgar, Saunders, Katharine E, Baudin, Samantha, Rico, Edhelene, Mejía-Echeverri, Álvaro, Taylor-Salmon, Emma, Hill, Verity, Breban, Mallery I, Vogels, Chantal B F, Grubaugh, Nathan D, Paul, Lauren M, Michael, Scott F, Johansson, Michael A, Adams, Laura E, Munoz-Jordan, Jorge, Paz-Bailey, Gabriela, Stanek, Danielle R
Published in Emerging infectious diseases (01.02.2024)
Published in Emerging infectious diseases (01.02.2024)
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Dengue virus antibodies enhance Zika virus infection
Paul, Lauren M, Carlin, Eric R, Jenkins, Meagan M, Tan, Amanda L, Barcellona, Carolyn M, Nicholson, Cindo O, Michael, Scott F, Isern, Sharon
Published in Clinical & translational immunology (01.12.2016)
Published in Clinical & translational immunology (01.12.2016)
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DengueSeq: a pan-serotype whole genome amplicon sequencing protocol for dengue virus
Vogels, Chantal B F, Hill, Verity, Breban, Mallery I, Chaguza, Chrispin, Paul, Lauren M, Sodeinde, Afeez, Taylor-Salmon, Emma, Ott, Isabel M, Petrone, Mary E, Dijk, Dennis, Jonges, Marcel, Welkers, Matthijs R A, Locksmith, Timothy, Dong, Yibo, Tarigopula, Namratha, Tekin, Omer, Schmedes, Sarah, Bunch, Sylvia, Cano, Natalia, Jaber, Rayah, Panzera, Charles, Stryker, Ian, Vergara, Julieta, Zimler, Rebecca, Kopp, Edgar, Heberlein, Lea, Herzog, Kaylee S, Fauver, Joseph R, Morrison, Andrea M, Michael, Scott F, Grubaugh, Nathan D
Published in BMC genomics (01.05.2024)
Published in BMC genomics (01.05.2024)
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Zika virus evolution and spread in the Americas
Metsky, Hayden C., Matranga, Christian B., Wohl, Shirlee, Schaffner, Stephen F., Freije, Catherine A., Winnicki, Sarah M., West, Kendra, Qu, James, Baniecki, Mary Lynn, Gladden-Young, Adrianne, Lin, Aaron E., Tomkins-Tinch, Christopher H., Ye, Simon H., Park, Daniel J., Luo, Cynthia Y., Barnes, Kayla G., Shah, Rickey R., Chak, Bridget, Barbosa-Lima, Giselle, Delatorre, Edson, Vieira, Yasmine R., Paul, Lauren M., Tan, Amanda L., Barcellona, Carolyn M., Porcelli, Mario C., Vasquez, Chalmers, Cannons, Andrew C., Cone, Marshall R., Hogan, Kelly N., Kopp, Edgar W., Anzinger, Joshua J., Garcia, Kimberly F., Parham, Leda A., Ramírez, Rosa M. Gélvez, Montoya, Maria C. Miranda, Rojas, Diana P., Brown, Catherine M., Hennigan, Scott, Sabina, Brandon, Scotland, Sarah, Gangavarapu, Karthik, Grubaugh, Nathan D., Oliveira, Glenn, Robles-Sikisaka, Refugio, Rambaut, Andrew, Gehrke, Lee, Smole, Sandra, Halloran, M. Elizabeth, Villar, Luis, Mattar, Salim, Lorenzana, Ivette, Cerbino-Neto, Jose, Valim, Clarissa, Degrave, Wim, Bozza, Patricia T., Gnirke, Andreas, Andersen, Kristian G., Isern, Sharon, Michael, Scott F., Bozza, Fernando A., Souza, Thiago M. L., Bosch, Irene, Yozwiak, Nathan L., MacInnis, Bronwyn L., Sabeti, Pardis C.
Published in Nature (London) (15.06.2017)
Published in Nature (London) (15.06.2017)
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Genomic epidemiology reveals multiple introductions of Zika virus into the United States
Grubaugh, Nathan D., Ladner, Jason T., Kraemer, Moritz U. G., Dudas, Gytis, Tan, Amanda L., Gangavarapu, Karthik, Wiley, Michael R., White, Stephen, Thézé, Julien, Magnani, Diogo M., Prieto, Karla, Reyes, Daniel, Bingham, Andrea M., Paul, Lauren M., Robles-Sikisaka, Refugio, Oliveira, Glenn, Pronty, Darryl, Barcellona, Carolyn M., Metsky, Hayden C., Baniecki, Mary Lynn, Barnes, Kayla G., Chak, Bridget, Freije, Catherine A., Gladden-Young, Adrianne, Gnirke, Andreas, Luo, Cynthia, MacInnis, Bronwyn, Matranga, Christian B., Park, Daniel J., Qu, James, Schaffner, Stephen F., Tomkins-Tinch, Christopher, West, Kendra L., Winnicki, Sarah M., Wohl, Shirlee, Yozwiak, Nathan L., Quick, Joshua, Fauver, Joseph R., Khan, Kamran, Brent, Shannon E., Reiner, Robert C., Lichtenberger, Paola N., Ricciardi, Michael J., Bailey, Varian K., Watkins, David I., Cone, Marshall R., Kopp, Edgar W., Hogan, Kelly N., Cannons, Andrew C., Jean, Reynald, Monaghan, Andrew J., Garry, Robert F., Loman, Nicholas J., Faria, Nuno R., Porcelli, Mario C., Vasquez, Chalmers, Nagle, Elyse R., Cummings, Derek A. T., Stanek, Danielle, Rambaut, Andrew, Sanchez-Lockhart, Mariano, Sabeti, Pardis C., Gillis, Leah D., Michael, Scott F., Bedford, Trevor, Pybus, Oliver G., Isern, Sharon, Palacios, Gustavo, Andersen, Kristian G.
Published in Nature (London) (15.06.2017)
Published in Nature (London) (15.06.2017)
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Capturing sequence diversity in metagenomes with comprehensive and scalable probe design
Metsky, Hayden C., Siddle, Katherine J., Gladden-Young, Adrianne, Qu, James, Yang, David K., Brehio, Patrick, Goldfarb, Andrew, Piantadosi, Anne, Wohl, Shirlee, Carter, Amber, Lin, Aaron E., Barnes, Kayla G., Tully, Damien C., Corleis, Bjӧrn, Hennigan, Scott, Barbosa-Lima, Giselle, Vieira, Yasmine R., Paul, Lauren M., Tan, Amanda L., Garcia, Kimberly F., Parham, Leda A., Odia, Ikponmwosa, Eromon, Philomena, Folarin, Onikepe A., Goba, Augustine, Simon-Lorière, Etienne, Hensley, Lisa, Balmaseda, Angel, Harris, Eva, Kwon, Douglas S., Allen, Todd M., Runstadler, Jonathan A., Smole, Sandra, Bozza, Fernando A., Souza, Thiago M. L., Isern, Sharon, Michael, Scott F., Lorenzana, Ivette, Gehrke, Lee, Bosch, Irene, Ebel, Gregory, Grant, Donald S., Happi, Christian T., Park, Daniel J., Gnirke, Andreas, Sabeti, Pardis C., Matranga, Christian B.
Published in Nature biotechnology (01.02.2019)
Published in Nature biotechnology (01.02.2019)
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A cohort study of men infected with COVID-19 for presence of SARS-CoV-2 virus in their semen
Burke, Corey A., Skytte, AB, Kasiri, Saghar, Howell, Dixie, Patel, Zamip P., Trolice, Mark P., Parekattil, Sijo J., Michael, Scott F., Paul, Lauren M.
Published in Journal of assisted reproduction and genetics (01.04.2021)
Published in Journal of assisted reproduction and genetics (01.04.2021)
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Ionic liquids with thioether motifs as synthetic cationic lipids for gene delivery
Gaitor, Jamie C, Paul, Lauren M, Reardon, Melissa M, Hmissa, Taha, Minkowicz, Samuel, Regner, Matthew, Sheng, Yinghong, Michael, Scott F, Isern, Sharon, Mirjafari, Arsalan
Published in Chemical communications (Cambridge, England) (20.07.2017)
Published in Chemical communications (Cambridge, England) (20.07.2017)
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Design Principles of Lipid-like Ionic Liquids for Gene Delivery
Siegel, David J, Anderson, Grace I, Paul, Lauren M, Seibert, Philipp J, Hillesheim, Patrick C, Sheng, Yinghong, Zeller, Matthias, Taubert, Andreas, Werner, Peter, Balischewski, Christian, Michael, Scott F, Mirjafari, Arsalan
Published in ACS applied bio materials (21.06.2021)
Published in ACS applied bio materials (21.06.2021)
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Correction: Biomimetic design of protic lipidic ionic liquids with enhanced fluidity
O'Brien, Richard A, Zayas, Manuel Sanchez, Nestor, Stephen T, Gaitor, Jamie C, Paul, Lauren M, Edhegard, Forrest A, Minkowicz, Samuel, Sykora, Richard E, Sheng, Yinghong, Michael, Scott F, Isern, Sharon, Mirjafari, Arsalan
Published in New journal of chemistry (03.10.2016)
Published in New journal of chemistry (03.10.2016)
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DengueSeq: A pan-serotype whole genome amplicon sequencing protocol for dengue virus
Vogels, Chantal B F, Hill, Verity, Breban, Mallery I, Chaguza, Chrispin, Paul, Lauren M, Sodeinde, Afeez, Taylor-Salmon, Emma, Ott, Isabel M, Petrone, Mary E, Dijk, Dennis, Jonges, Marcel, Welkers, Matthijs R A, Locksmith, Timothy, Dong, Yibo, Tarigopula, Namratha, Tekin, Omer, Schmedes, Sarah, Bunch, Sylvia, Cano, Natalia, Jaber, Rayah, Panzera, Charles, Stryker, Ian, Vergara, Julieta, Zimler, Rebecca, Kopp, Edgar, Heberlein, Lea, Morrison, Andrea M, Michael, Scott F, Grubaugh, Nathan D
Published in medRxiv : the preprint server for health sciences (13.10.2023)
Published in medRxiv : the preprint server for health sciences (13.10.2023)
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Ionic liquids with thioether motifs as synthetic cationic lipids for gene deliveryElectronic supplementary information (ESI) available. See DOI: 10.1039/c7cc03235h
Gaitor, Jamie C, Paul, Lauren M, Reardon, Melissa M, Hmissa, Taha, Minkowicz, Samuel, Regner, Matthew, Sheng, Yinghong, Michael, Scott F, Isern, Sharon, Mirjafari, Arsalan
Year of Publication 20.07.2017
Year of Publication 20.07.2017
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Journal Article
Travel surveillance uncovers dengue virus dynamics and introductions in the Caribbean
Taylor-Salmon, Emma, Hill, Verity, Paul, Lauren M, Koch, Robert T, Breban, Mallery I, Chaguza, Chrispin, Sodeinde, Afeez, Warren, Joshua L, Bunch, Sylvia, Cano, Natalia, Cone, Marshall, Eysoldt, Sarah, Garcia, Alezaundra, Gilles, Nicadia, Hagy, Andrew, Heberlein, Lea, Jaber, Rayah, Kassens, Elizabeth, Colarusso, Pamela, Davis, Amanda, Baudin, Samantha, Rico, Edhelene, Mejía-Echeverri, Álvaro, Scott, Blake, Stanek, Danielle, Zimler, Rebecca, Muñoz-Jordán, Jorge L, Santiago, Gilberto A, Adams, Laura E, Paz-Bailey, Gabriela, Spillane, Melanie, Katebi, Volha, Paulino-Ramírez, Robert, Mueses, Sayira, Peguero, Armando, Sánchez, Nelissa, Norman, Francesca F, Galán, Juan-Carlos, Huits, Ralph, Hamer, Davidson H, Vogels, Chantal B F, Morrison, Andrea, Michael, Scott F, Grubaugh, Nathan D
Published in medRxiv : the preprint server for health sciences (12.11.2023)
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Published in medRxiv : the preprint server for health sciences (12.11.2023)
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