Virus Prevalence and Genetic Diversity Across a Wild Bumblebee Community
Pascall, David J, Tinsley, Matthew C, Clark, Bethany L, Obbard, Darren J, Wilfert, Lena
Published in Frontiers in microbiology (22.04.2021)
Published in Frontiers in microbiology (22.04.2021)
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Journal Article
Combining rapid antigen testing and syndromic surveillance improves community-based COVID-19 detection in a low-income country
Chadwick, Fergus J, Clark, Jessica, Chowdhury, Shayan, Chowdhury, Tasnuva, Pascall, David J, Haddou, Yacob, Andrecka, Joanna, Kundegorski, Mikolaj, Wilkie, Craig, Brum, Eric, Shirin, Tahmina, Alamgir, A S M, Rahman, Mahbubur, Alam, Ahmed Nawsher, Khan, Farzana, Swallow, Ben, Mair, Frances S, Illian, Janine, Trotter, Caroline L, Hill, Davina L, Husmeier, Dirk, Matthiopoulos, Jason, Hampson, Katie, Sania, Ayesha
Published in Nature communications (26.05.2022)
Published in Nature communications (26.05.2022)
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Journal Article
"Frozen evolution" of an RNA virus suggests accidental release as a potential cause of arbovirus re-emergence
Pascall, David J, Nomikou, Kyriaki, Bréard, Emmanuel, Zientara, Stephan, Filipe, Ana da Silva, Hoffmann, Bernd, Jacquot, Maude, Singer, Joshua B, De Clercq, Kris, Bøtner, Anette, Sailleau, Corinne, Viarouge, Cyril, Batten, Carrie, Puggioni, Giantonella, Ligios, Ciriaco, Savini, Giovanni, van Rijn, Piet A, Mertens, Peter P C, Biek, Roman, Palmarini, Massimo
Published in PLoS biology (28.04.2020)
Published in PLoS biology (28.04.2020)
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Journal Article
Northern Gannet foraging trip length increases with colony size and decreases with latitude
Clark, Bethany L, Vigfúsdóttir, Freydís, Wanless, Sarah, Hamer, Keith C, Bodey, Thomas W, Bearhop, Stuart, Bennison, Ashley, Blackburn, Jez, Cox, Sam L, d'Entremont, Kyle J N, Garthe, Stefan, Grémillet, David, Jessopp, Mark, Lane, Jude, Lescroël, Amélie, Montevecchi, William A, Pascall, David J, Provost, Pascal, Wakefield, Ewan D, Warwick-Evans, Victoria, Wischnewski, Saskia, Wright, Lucy J, Votier, Stephen C
Published in Royal Society open science (01.09.2024)
Published in Royal Society open science (01.09.2024)
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Journal Article
Adjusting for time of infection or positive test when estimating the risk of a post-infection outcome in an epidemic
Seaman, Shaun R, Nyberg, Tommy, Overton, Christopher E, Pascall, David J, Presanis, Anne M, De Angelis, Daniela
Published in Statistical methods in medical research (01.10.2022)
Published in Statistical methods in medical research (01.10.2022)
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Journal Article
Directions of change in intrinsic case severity across successive SARS-CoV-2 variant waves have been inconsistent
Pascall, David J., Vink, Elen, Blacow, Rachel, Bulteel, Naomi, Campbell, Alasdair, Campbell, Robyn, Clifford, Sarah, Davis, Chris, da Silva Filipe, Ana, El Sakka, Noha, Fjodorova, Ludmila, Forrest, Ruth, Goldstein, Emily, Gunson, Rory, Haughney, John, Holden, Matthew T.G., Honour, Patrick, Hughes, Joseph, James, Edward, Lewis, Tim, MacLean, Oscar, McHugh, Martin, Mollett, Guy, Nyberg, Tommy, Onishi, Yusuke, Parcell, Ben, Ray, Surajit, Robertson, David L., Seaman, Shaun R., Shabaan, Sharif, Shepherd, James G., Smollett, Katherine, Templeton, Kate, Wastnedge, Elizabeth, Wilkie, Craig, Williams, Thomas, Thomson, Emma C.
Published in The Journal of infection (01.08.2023)
Published in The Journal of infection (01.08.2023)
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Journal Article
Circulating SARS-CoV-2 spike N439K variants maintain fitness while evading antibody-mediated immunity
Thomson, Emma C., Rosen, Laura E., Shepherd, James G., Spreafico, Roberto, da Silva Filipe, Ana, Wojcechowskyj, Jason A., Davis, Chris, Piccoli, Luca, Pascall, David J., Dillen, Josh, Lytras, Spyros, Czudnochowski, Nadine, Shah, Rajiv, Meury, Marcel, Jesudason, Natasha, De Marco, Anna, Li, Kathy, Bassi, Jessica, O’Toole, Aine, Pinto, Dora, Colquhoun, Rachel M., Culap, Katja, Jackson, Ben, Zatta, Fabrizia, Rambaut, Andrew, Jaconi, Stefano, Sreenu, Vattipally B., Nix, Jay, Zhang, Ivy, Jarrett, Ruth F., Glass, William G., Beltramello, Martina, Nomikou, Kyriaki, Pizzuto, Matteo, Tong, Lily, Cameroni, Elisabetta, Croll, Tristan I., Johnson, Natasha, Di Iulio, Julia, Wickenhagen, Arthur, Ceschi, Alessandro, Harbison, Aoife M., Mair, Daniel, Ferrari, Paolo, Smollett, Katherine, Sallusto, Federica, Carmichael, Stephen, Garzoni, Christian, Nichols, Jenna, Galli, Massimo, Hughes, Joseph, Riva, Agostino, Ho, Antonia, Schiuma, Marco, Semple, Malcolm G., Openshaw, Peter J.M., Fadda, Elisa, Baillie, J. Kenneth, Chodera, John D., Rihn, Suzannah J., Lycett, Samantha J., Virgin, Herbert W., Telenti, Amalio, Corti, Davide, Robertson, David L., Snell, Gyorgy
Published in Cell (04.03.2021)
Published in Cell (04.03.2021)
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Journal Article
The SARS-CoV-2 Alpha variant was associated with increased clinical severity of COVID-19 in Scotland: A genomics-based retrospective cohort analysis
Pascall, David J, Vink, Elen, Blacow, Rachel, Bulteel, Naomi, Campbell, Alasdair, Campbell, Robyn, Clifford, Sarah, Davis, Chris, da Silva Filipe, Ana, El Sakka, Noha, Fjodorova, Ludmila, Forrest, Ruth, Goldstein, Emily, Gunson, Rory, Haughney, John, Holden, Matthew T G, Honour, Patrick, Hughes, Joseph, James, Edward, Lewis, Tim, Lycett, Samantha, MacLean, Oscar, McHugh, Martin, Mollett, Guy, Onishi, Yusuke, Parcell, Ben, Ray, Surajit, Robertson, David L, Shabaan, Sharif, Shepherd, James G, Smollett, Katherine, Templeton, Kate, Wastnedge, Elizabeth, Wilkie, Craig, Williams, Thomas, Thomson, Emma C
Published in PloS one (13.04.2023)
Published in PloS one (13.04.2023)
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Journal Article
Host evolutionary history predicts virus prevalence across bumblebee species
Pascall, David J, Tinsley, Matthew C, Obbard, Darren J, Wilfert, Lena
Published in bioRxiv (17.12.2018)
Published in bioRxiv (17.12.2018)
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Paper
The SARS-CoV-2 Alpha variant was associated with increased clinical severity of COVID-19 in Scotland: A genomics-based retrospective cohort analysis
David J. Pascall, Elen Vink, Rachel Blacow, Naomi Bulteel, Alasdair Campbell, Robyn Campbell, Sarah Clifford, Chris Davis, Ana da Silva Filipe, Noha El Sakka, Ludmila Fjodorova, Ruth Forrest, Emily Goldstein, Rory Gunson, John Haughney, Matthew T. G. Holden, Patrick Honour, Joseph Hughes, Edward James, Tim Lewis, Samantha Lycett, Oscar MacLean, Martin McHugh, Guy Mollett, Yusuke Onishi, Ben Parcell, Surajit Ray, David L. Robertson, Sharif Shabaan, James G. Shepherd, Katherine Smollett, Kate Templeton, Elizabeth Wastnedge, Craig Wilkie, Thomas Williams, Emma C. Thomson
Published in PloS one (01.01.2023)
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Published in PloS one (01.01.2023)
Journal Article
The NOSTRA model: coherent estimation of infection sources in the case of possible nosocomial transmission
Pascall, David J, Jackson, Chris, Evans, Stephanie, Gouliouris, Theodore, Illingworth, Chris, Piatek, Stefan, Robotham, Julie V, Stirrup, Oliver, Warne, Ben, Breuer, Judith, De Angelis, Daniela
Year of Publication 22.01.2024
Year of Publication 22.01.2024
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Journal Article
The NOSTRA model: coherent estimation of infection sources in the case of possible nosocomial transmission
Pascall, David J, Jackson, Chris, Evans, Stephanie, Gouliouris, Theodore, Illingworth, Chris, Piatek, Stefan, Robotham, Julie V, Stirrup, Oliver, Warne, Ben, Breuer, Judith, De Angelis, Daniela
Published in arXiv.org (22.01.2024)
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Published in arXiv.org (22.01.2024)
Paper
Evolutionary stasis of an RNA virus indicates arbovirus re-emergence triggered by accidental release
Pascall, David J, Nomikou, Kyriaki, Bréard, Emmanuel, Zientara, Stephan, Ana Da Silva Filipe, Hoffmann, Bernd, Jacquot, Maude, Singer, Joshua B, De Clercq, Kris, Bøtner, Anette, Sailleau, Corinne, Viarouge, Cyrille, Batten, Carrie, Puggioni, Giantonella, Ligios, Ciriaco, Savini, Giovanni, Van Rijn, Piet A, Mertens, Peter Pc, Biek, Roman, Palmarini, Massimo
Published in bioRxiv (13.12.2019)
Published in bioRxiv (13.12.2019)
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Paper
The circulating SARS-CoV-2 spike variant N439K maintains fitness while evading antibody-mediated immunity
Thomson, Emma C, Rosen, Laura E, Shepherd, James G, Spreafico, Roberto, Ana Da Silva Filipe, Wojcechowskyj, Jason A, Davis, Chris, Piccoli, Luca, Pascall, David J, Dillen, Josh, Lytras, Spyros, Czudnochowski, Nadine, Shah, Rajiv, Meury, Marcel, Jesudason, Natasha, De Marco, Anna, Li, Kathy, Bassi, Jessica, Aine O’toole, Pinto, Dora, Colquhoun, Rachel M, Culap, Katja, Jackson, Ben, Zatta, Fabrizia, Rambaut, Andrew, Jaconi, Stefano, Sreenu, Vattipally B, Nix, Jay, Jarrett, Ruth F, Beltramello, Martina, Nomikou, Kyriaki, Pizzuto, Matteo, Tong, Lily, Cameroni, Elisabetta, Johnson, Natasha, Wickenhagen, Arthur, Ceschi, Alessandro, Mair, Daniel, Ferrari, Paolo, Smollett, Katherine, Sallusto, Federica, Carmichael, Stephen, Garzoni, Christian, Nichols, Jenna, Galli, Massimo, Hughes, Joseph, Riva, Agostino, Ho, Antonia, Semple, Malcolm G, Openshaw, Peter Jm, Baillie, J Kenneth, The Isaric4c Investigators, The Covid-19 Genomics Uk (Cog-Uk) Consortium, Rihn, Suzannah J, Lycett, Samantha J, Virgin, Herbert W, Telenti, Amalio, Corti, Davide, Robertson, David L, Snell, Gyorgy
Published in bioRxiv (05.11.2020)
Published in bioRxiv (05.11.2020)
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