A multi‐omic single cell sequencing approach to develop a CD8 T cell specific gene signature for anti‐PD1 response in solid tumors
Kumar, Namit, Papillon‐Cavanagh, Simon, Tang, Hao, Wang, Shiliang, Stromko, Caitlyn, Ho, Ching‐Ping, Soni‐Sheth, Sonal, Vasquez‐Grinnell, Steven, Broz, Miranda L., Tenney, Daniel J., Wichroski, Michael J., Walsh, Alice M., Hu, Yanhua, Benci, Joseph L.
Published in International journal of cancer (01.12.2022)
Published in International journal of cancer (01.12.2022)
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Journal Article
The histone mark H3K36me2 recruits DNMT3A and shapes the intergenic DNA methylation landscape
Weinberg, Daniel N, Papillon-Cavanagh, Simon, Chen, Haifen, Yue, Yuan, Chen, Xiao, Rajagopalan, Kartik N, Horth, Cynthia, McGuire, John T, Xu, Xinjing, Nikbakht, Hamid, Lemiesz, Agata E, Marchione, Dylan M, Marunde, Matthew R, Meiners, Matthew J, Cheek, Marcus A, Keogh, Michael-Christopher, Bareke, Eric, Djedid, Anissa, Harutyunyan, Ashot S, Jabado, Nada, Garcia, Benjamin A, Li, Haitao, Allis, C David, Majewski, Jacek, Lu, Chao
Published in Nature (London) (01.09.2019)
Published in Nature (London) (01.09.2019)
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Journal Article
Impaired H3K36 methylation defines a subset of head and neck squamous cell carcinomas
Papillon-Cavanagh, Simon, Lu, Chao, Gayden, Tenzin, Mikael, Leonie G, Bechet, Denise, Karamboulas, Christina, Ailles, Laurie, Karamchandani, Jason, Marchione, Dylan M, Garcia, Benjamin A, Weinreb, Ilan, Goldstein, David, Lewis, Peter W, Dancu, Octavia Maria, Dhaliwal, Sandeep, Stecho, William, Howlett, Christopher J, Mymryk, Joe S, Barrett, John W, Nichols, Anthony C, Allis, C David, Majewski, Jacek, Jabado, Nada
Published in Nature genetics (01.02.2017)
Published in Nature genetics (01.02.2017)
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Journal Article
Recurrent somatic mutations in ACVR1 in pediatric midline high-grade astrocytoma
Fontebasso, Adam M, Papillon-Cavanagh, Simon, Schwartzentruber, Jeremy, Nikbakht, Hamid, Gerges, Noha, Fiset, Pierre-Olivier, Bechet, Denise, Faury, Damien, De Jay, Nicolas, Ramkissoon, Lori A, Corcoran, Aoife, Jones, David T W, Sturm, Dominik, Johann, Pascal, Tomita, Tadanori, Goldman, Stewart, Nagib, Mahmoud, Bendel, Anne, Goumnerova, Liliana, Bowers, Daniel C, Leonard, Jeffrey R, Rubin, Joshua B, Alden, Tord, Browd, Samuel, Geyer, J Russell, Leary, Sarah, Jallo, George, Cohen, Kenneth, Gupta, Nalin, Prados, Michael D, Carret, Anne-Sophie, Ellezam, Benjamin, Crevier, Louis, Klekner, Almos, Bognar, Laszlo, Hauser, Peter, Garami, Miklos, Myseros, John, Dong, Zhifeng, Siegel, Peter M, Malkin, Hayley, Ligon, Azra H, Albrecht, Steffen, Pfister, Stefan M, Ligon, Keith L, Majewski, Jacek, Jabado, Nada, Kieran, Mark W
Published in Nature genetics (01.05.2014)
Published in Nature genetics (01.05.2014)
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Journal Article
Histone H3K36 mutations promote sarcomagenesis through altered histone methylation landscape
Lu, Chao, Jain, Siddhant U., Hoelper, Dominik, Bechet, Denise, Molden, Rosalynn C., Ran, Leili, Murphy, Devan, Venneti, Sriram, Hameed, Meera, Pawel, Bruce R., Wunder, Jay S., Dickson, Brendan C., Lundgren, Stefan M., Jani, Krupa S., De Jay, Nicolas, Papillon-Cavanagh, Simon, Andrulis, Irene L., Sawyer, Sarah L., Grynspan, David, Turcotte, Robert E., Nadaf, Javad, Fahiminiyah, Somayyeh, Muir, Tom W., Majewski, Jacek, Thompson, Craig B., Chi, Ping, Garcia, Benjamin A., Allis, C. David, Jabado, Nada, Lewis, Peter W.
Published in Science (American Association for the Advancement of Science) (13.05.2016)
Published in Science (American Association for the Advancement of Science) (13.05.2016)
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Journal Article
Spatial and temporal homogeneity of driver mutations in diffuse intrinsic pontine glioma
Nikbakht, Hamid, Panditharatna, Eshini, Mikael, Leonie G, Li, Rui, Gayden, Tenzin, Osmond, Matthew, Ho, Cheng-Ying, Kambhampati, Madhuri, Hwang, Eugene I, Faury, Damien, Siu, Alan, Papillon-Cavanagh, Simon, Bechet, Denise, Ligon, Keith L, Ellezam, Benjamin, Ingram, Wendy J, Stinson, Caedyn, Moore, Andrew S, Warren, Katherine E, Karamchandani, Jason, Packer, Roger J, Jabado, Nada, Majewski, Jacek, Nazarian, Javad
Published in Nature communications (06.04.2016)
Published in Nature communications (06.04.2016)
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Journal Article
Identification of FAT3 as a new candidate gene for adolescent idiopathic scoliosis
Nada, Dina, Julien, Cédric, Papillon-Cavanagh, Simon, Majewski, Jacek, Elbakry, Mohamed, Elremaly, Wesam, Samuels, Mark E, Moreau, Alain
Published in Scientific reports (19.07.2022)
Published in Scientific reports (19.07.2022)
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Journal Article
Biomarker analysis from CheckMate 214: nivolumab plus ipilimumab versus sunitinib in renal cell carcinoma
Motzer, Robert J, Choueiri, Toni K, McDermott, David F, Powles, Thomas, Vano, Yann-Alexandre, Gupta, Saurabh, Yao, Jin, Han, Celine, Ammar, Ron, Papillon-Cavanagh, Simon, Saggi, Shruti S, McHenry, M Brent, Ross-Macdonald, Petra, Wind-Rotolo, Megan
Published in Journal for immunotherapy of cancer (01.03.2022)
Published in Journal for immunotherapy of cancer (01.03.2022)
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Journal Article
Mutation in The Nuclear-Encoded Mitochondrial Isoleucyl-tRNA Synthetase IARS2 in Patients with Cataracts, Growth Hormone Deficiency with Short Stature, Partial Sensorineural Deafness, and Peripheral Neuropathy or with Leigh Syndrome
Schwartzentruber, Jeremy, Buhas, Daniela, Majewski, Jacek, Sasarman, Florin, Papillon-Cavanagh, Simon, Thiffaut, Isabelle, Sheldon, Katherine M., Massicotte, Christine, Patry, Lysanne, Simon, Mariella, Zare, Amir S., McKernan, Kevin J., Michaud, Jacques, Boles, Richard G., Deal, Cheri L., Desilets, Valerie, Shoubridge, Eric A., Samuels, Mark E.
Published in Human mutation (01.11.2014)
Published in Human mutation (01.11.2014)
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Journal Article
Mutations in C5ORF42 Cause Joubert Syndrome in the French Canadian Population
Srour, Myriam, Schwartzentruber, Jeremy, Hamdan, Fadi F., Ospina, Luis H., Patry, Lysanne, Labuda, Damian, Massicotte, Christine, Dobrzeniecka, Sylvia, Capo-Chichi, José-Mario, Papillon-Cavanagh, Simon, Samuels, Mark E., Boycott, Kym M., Shevell, Michael I., Laframboise, Rachel, Désilets, Valérie, Maranda, Bruno, Rouleau, Guy A., Majewski, Jacek, Michaud, Jacques L.
Published in American journal of human genetics (06.04.2012)
Published in American journal of human genetics (06.04.2012)
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Journal Article
Molecular correlates of response to nivolumab at baseline and on treatment in patients with RCC
Ross-Macdonald, Petra, Walsh, Alice M, Chasalow, Scott D, Ammar, Ron, Papillon-Cavanagh, Simon, Szabo, Peter M, Choueiri, Toni K, Sznol, Mario, Wind-Rotolo, Megan
Published in Journal for immunotherapy of cancer (01.03.2021)
Published in Journal for immunotherapy of cancer (01.03.2021)
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Journal Article
Mutation in The Nuclear-Encoded Mitochondrial Isoleucyl-tRNA Synthetase IARS2 in Patients with Cataracts, Growth Hormone Deficiency with Short Stature, Partial Sensorineural Deafness, and Peripheral Neuropathy or with Leigh Syndrome
Schwartzentruber, Jeremy, Buhas, Daniela, Majewski, Jacek, Sasarman, Florin, Papillon-Cavanagh, Simon, Thiffault, Isabelle, Sheldon, Katherine M., Massicotte, Christine, Patry, Lysanne, Simon, Mariella, Zare, Amir S., McKernan, Kevin J., Consortium, FORGE Canada, Michaud, Jacques, Boles, Richard G., Deal, Cheri L., Desilets, Valerie, Shoubridge, Eric A., Samuels, Mark E.
Published in Human mutation (01.02.2015)
Published in Human mutation (01.02.2015)
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Journal Article
mRMRe: an R package for parallelized mRMR ensemble feature selection
De Jay, Nicolas, Papillon-Cavanagh, Simon, Olsen, Catharina, El-Hachem, Nehme, Bontempi, Gianluca, Haibe-Kains, Benjamin
Published in Bioinformatics (15.09.2013)
Published in Bioinformatics (15.09.2013)
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Journal Article
H3K27M induces defective chromatin spread of PRC2-mediated repressive H3K27me2/me3 and is essential for glioma tumorigenesis
Harutyunyan, Ashot S, Krug, Brian, Chen, Haifen, Papillon-Cavanagh, Simon, Zeinieh, Michele, De Jay, Nicolas, Deshmukh, Shriya, Chen, Carol C L, Belle, Jad, Mikael, Leonie G, Marchione, Dylan M, Li, Rui, Nikbakht, Hamid, Hu, Bo, Cagnone, Gael, Cheung, Warren A, Mohammadnia, Abdulshakour, Bechet, Denise, Faury, Damien, McConechy, Melissa K, Pathania, Manav, Jain, Siddhant U, Ellezam, Benjamin, Weil, Alexander G, Montpetit, Alexandre, Salomoni, Paolo, Pastinen, Tomi, Lu, Chao, Lewis, Peter W, Garcia, Benjamin A, Kleinman, Claudia L, Jabado, Nada, Majewski, Jacek
Published in Nature communications (19.03.2019)
Published in Nature communications (19.03.2019)
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Journal Article
The molecular landscape of ETMR at diagnosis and relapse
Lambo, Sander, Gröbner, Susanne N, Rausch, Tobias, Waszak, Sebastian M, Schmidt, Christin, Gorthi, Aparna, Romero, July Carolina, Mauermann, Monika, Brabetz, Sebastian, Krausert, Sonja, Buchhalter, Ivo, Koster, Jan, Zwijnenburg, Danny A, Sill, Martin, Hübner, Jens-Martin, Mack, Norman, Schwalm, Benjamin, Ryzhova, Marina, Hovestadt, Volker, Papillon-Cavanagh, Simon, Chan, Jennifer A, Landgraf, Pablo, Ho, Ben, Milde, Till, Witt, Olaf, Ecker, Jonas, Sahm, Felix, Sumerauer, David, Ellison, David W, Orr, Brent A, Darabi, Anna, Haberler, Christine, Figarella-Branger, Dominique, Wesseling, Pieter, Schittenhelm, Jens, Remke, Marc, Taylor, Michael D, Gil-da-Costa, Maria J, Łastowska, Maria, Grajkowska, Wiesława, Hasselblatt, Martin, Hauser, Peter, Pietsch, Torsten, Uro-Coste, Emmanuelle, Bourdeaut, Franck, Masliah-Planchon, Julien, Rigau, Valérie, Alexandrescu, Sanda, Wolf, Stephan, Li, Xiao-Nan, Schüller, Ulrich, Snuderl, Matija, Karajannis, Matthias A, Giangaspero, Felice, Jabado, Nada, von Deimling, Andreas, Jones, David T W, Korbel, Jan O, von Hoff, Katja, Lichter, Peter, Huang, Annie, Bishop, Alexander J R, Pfister, Stefan M, Korshunov, Andrey, Kool, Marcel
Published in Nature (London) (12.12.2019)
Published in Nature (London) (12.12.2019)
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Journal Article
Abstract 3221: T-cell receptor sequencing for pharmacodynamic and response biomarkers of checkpoint blockade
Papillon-Cavanagh, Simon, Walsh, Alice M., Qi, Zhenhao, Wind-Rotolo, Megan, Saci, Abdel, Doshi, Parul, Dobrin, Radu, Szustakowski, Joseph
Published in Cancer research (Chicago, Ill.) (01.07.2019)
Published in Cancer research (Chicago, Ill.) (01.07.2019)
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