Simulation of Full HIV Cluster Networks in a Nationally Representative Model Indicates Intervention Opportunities
France, Anne Marie, Panneer, Nivedha, Farnham, Paul G, Oster, Alexandra M, Viguerie, Alex, Gopalappa, Chaitra
Published in Journal of acquired immune deficiency syndromes (1999) (01.04.2024)
Published in Journal of acquired immune deficiency syndromes (1999) (01.04.2024)
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Journal Article
Human Immunodeficiency Virus (HIV) Outbreak Investigation Among Persons Who Inject Drugs in Massachusetts Enhanced by HIV Sequence Data
Tumpney, Matthew, John, Betsey, Panneer, Nivedha, McClung, R Paul, Campbell, Ellsworth M, Roosevelt, Kathleen, DeMaria, Alfred, Buchacz, Kate, Switzer, William M, Lyss, Sheryl, Cranston, Kevin
Published in The Journal of infectious diseases (01.10.2020)
Published in The Journal of infectious diseases (01.10.2020)
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Journal Article
Natural selection favoring more transmissible HIV detected in United States molecular transmission network
Wertheim, Joel O., Oster, Alexandra M., Switzer, William M., Zhang, Chenhua, Panneer, Nivedha, Campbell, Ellsworth, Saduvala, Neeraja, Johnson, Jeffrey A., Heneine, Walid
Published in Nature communications (19.12.2019)
Published in Nature communications (19.12.2019)
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Journal Article
Optimising diagnosis of viraemic hepatitis C infection: the development of a target product profile
Ivanova Reipold, Elena, Easterbrook, Philippa, Trianni, Alessandra, Panneer, Nivedha, Krakower, Douglas, Ongarello, Stefano, Roberts, Teri, Miller, Veronica, Denkinger, Claudia
Published in BMC infectious diseases (01.11.2017)
Published in BMC infectious diseases (01.11.2017)
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Journal Article
Estimating Effects of HIV Sequencing Data Completeness on Transmission Network Patterns and Detection of Growing HIV Transmission Clusters
Dasgupta, Sharoda, France, Anne Marie, Brandt, Mary-Grace, Reuer, Jennifer, Zhang, Tianchi, Panneer, Nivedha, Hernandez, Angela L, Oster, Alexandra M
Published in AIDS research and human retroviruses (01.04.2019)
Published in AIDS research and human retroviruses (01.04.2019)
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Journal Article
Increasing Capacity to Detect Clusters of Rapid HIV Transmission in Varied Populations-United States
Oster, Alexandra M, Panneer, Nivedha, Lyss, Sheryl B, McClung, R Paul, Watson, Meg, Saduvala, Neeraja, Ocfemia, M Cheryl Bañez, Linley, Laurie, Switzer, William M, Wertheim, Joel O, Campbell, Ellsworth, Hernandez, Angela L, France, Anne Marie
Published in Viruses (30.03.2021)
Published in Viruses (30.03.2021)
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Journal Article
Clusters of Rapid HIV Transmission Among Gay, Bisexual, and Other Men Who Have Sex with Men — United States, 2018–2021
Perez, Stephen M, Panneer, Nivedha, France, Anne Marie, Carnes, Neal, Curran, Kathryn G, Denson, Damian J, Oster, Alexandra M
Published in MMWR. Morbidity and mortality weekly report (23.09.2022)
Published in MMWR. Morbidity and mortality weekly report (23.09.2022)
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A functional proteomic method for biomarker discovery
Reynolds, Fred, Panneer, Nivedha, Tutino, Christopher M, Wu, Michael, Skrabal, William R, Moskaluk, Christopher, Kelly, Kimberly A
Published in PloS one (19.07.2011)
Published in PloS one (19.07.2011)
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Journal Article
Identifying Clusters of Recent and Rapid HIV Transmission Through Analysis of Molecular Surveillance Data
Oster, Alexandra M, France, Anne Marie, Panneer, Nivedha, Bañez Ocfemia, M Cheryl, Campbell, Ellsworth, Dasgupta, Sharoda, Switzer, William M, Wertheim, Joel O, Hernandez, Angela L
Published in Journal of acquired immune deficiency syndromes (1999) (15.12.2018)
Published in Journal of acquired immune deficiency syndromes (1999) (15.12.2018)
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Incident infection in high-priority HIV molecular transmission clusters in the United States
Wertheim, Joel O, Panneer, Nivedha, France, Anne Marie, Saduvala, Neeraja, Oster, Alexandra M
Published in AIDS (London) (01.07.2020)
Published in AIDS (London) (01.07.2020)
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Journal Article
Opioid Use Fueling HIV Transmission in an Urban Setting: An Outbreak of HIV Infection Among People Who Inject Drugs-Massachusetts, 2015-2018
Alpren, Charles, Dawson, Erica L, John, Betsey, Cranston, Kevin, Panneer, Nivedha, Fukuda, H Dawn, Roosevelt, Kathleen, Klevens, R Monina, Bryant, Janice, Peters, Philip J, Lyss, Sheryl B, Switzer, William M, Burrage, Amanda, Murray, Ashley, Agnew-Brune, Christine, Stiles, Tracy, McClung, Paul, Campbell, Ellsworth M, Breen, Courtney, Randall, Liisa M, Dasgupta, Sharoda, Onofrey, Shauna, Bixler, Danae, Hampton, Kischa, Jaeger, Jenifer Leaf, Hsu, Katherine K, Adih, William, Callis, Barry, Goldman, Linda R, Danner, Susie P, Jia, Hongwei, Tumpney, Matthew, Board, Amy, Brown, Catherine, DeMaria, Jr, Alfred, Buchacz, Kate
Published in American journal of public health (1971) (01.01.2020)
Published in American journal of public health (1971) (01.01.2020)
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Assessing concordance of HIV risk behaviors collected by different surveillance systems
Panneer, Nivedha, Balaji, Alexandra B, Crim, Stacy M, Bosh, Karin A, Shouse, R Luke, Fagan, Jennifer L, Beer, Linda
Published in AIDS (London) (01.10.2022)
Published in AIDS (London) (01.10.2022)
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Journal Article
HIV Cluster and Outbreak Detection and Response: The Science and Experience
Oster, Alexandra M., Lyss, Sheryl B., McClung, R. Paul, Watson, Meg, Panneer, Nivedha, Hernandez, Angela L., Buchacz, Kate, Robilotto, Susan E., Curran, Kathryn G., Hassan, Rashida, Ocfemia, M. Cheryl Bañez, Linley, Laurie, Perez, Stephen M., Phillip, Stanley A., France, Anne Marie
Published in American journal of preventive medicine (01.11.2021)
Published in American journal of preventive medicine (01.11.2021)
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Journal Article
Response to a Large HIV Outbreak, Cabell County, West Virginia, 2018–2019
McClung, R. Paul, Atkins, Amy D., Kilkenny, Michael, Bernstein, Kyle T., Willenburg, Kara S., Weimer, Matthew, Robilotto, Susan, Panneer, Nivedha, Thomasson, Erica, Adkins, Elizabeth, Lyss, Sheryl B., Balleydier, Shawn, Edwards, Anita, Chen, Mi, Wilson, Suzanne, Handanagic, Senad, Hogan, Vicki, Watson, Meg, Eubank, Scott, Wright, Carolyn, Thompson, Antoine, DiNenno, Elizabeth, Fanfair, Robyn Neblett, Ridpath, Alison, Oster, Alexandra M.
Published in American journal of preventive medicine (01.11.2021)
Published in American journal of preventive medicine (01.11.2021)
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Journal Article
Brief Report: Temporal Changes in HIV Transmission Patterns Among Young Men Who Have Sex With Men, United States, 2009-2016
Panneer, Nivedha, France, Anne Marie, Whiteside, Y Omar, Zhang, Tianchi, Wertheim, Joel O, Oster, Alexandra M
Published in Journal of acquired immune deficiency syndromes (1999) (01.05.2020)
Published in Journal of acquired immune deficiency syndromes (1999) (01.05.2020)
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High HIV diversity, recombination, and superinfection revealed in a large outbreak among persons who inject drugs in Kentucky and Ohio, USA
Switzer, William M, Shankar, Anupama, Jia, Hongwei, Knyazev, Sergey, Ambrosio, Frank, Kelly, Reagan, Zheng, HaoQiang, Campbell, Ellsworth M, Cintron, Roxana, Pan, Yi, Saduvala, Neeraja, Panneer, Nivedha, Richman, Rhiannon, Singh, Manny B, Thoroughman, Douglas A, Blau, Erin F, Khalil, George M, Lyss, Sheryl, Heneine, Walid
Published in Virus evolution (2024)
Published in Virus evolution (2024)
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HIV and Hepatitis C Virus Infection in the United States: Whom and How to Test
Panneer, Nivedha, Lontok, Erik, Branson, Bernard M., Teo, Chong-Gee, Dan, Corinna, Parker, Monica, Stekler, Joanne D., DeMaria, Alfred, Miller, Veronica
Published in Clinical infectious diseases (15.09.2014)
Published in Clinical infectious diseases (15.09.2014)
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Journal Article
HIV Diagnoses Among Persons Who Inject Drugs — Northeastern Massachusetts, 2015–2018
Cranston, Kevin, Alpren, Charles, John, Betsey, Dawson, Erica, Roosevelt, Kathleen, Burrage, Amanda, Bryant, Janice, Switzer, William M., Breen, Courtney, Peters, Philip J., Stiles, Tracy, Murray, Ashley, Fukuda, H. Dawn, Adih, William, Goldman, Linda, Panneer, Nivedha, Callis, Barry, Campbell, Ellsworth M., Randall, Liisa, France, Anne Marie, Klevens, R. Monina, Lyss, Sheryl, Onofrey, Shauna, Agnew-Brune, Christine, Goulart, Michael, Jia, Hongwei, Tumpney, Matthew, McClung, Paul, Dasgupta, Sharoda, Bixler, Danae, Hampton, Kischa, Board, Amy, Jaeger, Jenifer Leaf, Buchacz, Kate, DeMaria, Alfred
Published in MMWR. Morbidity and mortality weekly report (15.03.2019)
Published in MMWR. Morbidity and mortality weekly report (15.03.2019)
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HIV Infection Investigation in a Rural Area — West Virginia, 2017
Evans, Mary E., Labuda, Sarah M., Hogan, Vicki, Agnew-Brune, Christine, Armstrong, John, Karuppiah, Amarnath Babu Periasamy, Blankinship, Deborah, Buchacz, Kate, Burton, Kenya, Cibrik, Sharon, Hoffman, William, Kirk, Nathan, Lee, Chang, McGraw, Dondeena, Ocfemia, M. Cheryl Bañez, Panneer, Nivedha, Reynolds, Pamela, Rose, Bridget, Salmon, Melinda, Scott, Melissa, Thompson, Antoine, Wills, David, Young, Sherri A., Gupta, Rahul, Haddy, Loretta, Weidle, Paul J., Mark-Carew, Miguella
Published in MMWR. Morbidity and mortality weekly report (02.03.2018)
Published in MMWR. Morbidity and mortality weekly report (02.03.2018)
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