Retrotranspositional landscape of Asian rice revealed by 3000 genomes
Carpentier, Marie-Christine, Manfroi, Ernandes, Wei, Fu-Jin, Wu, Hshin-Ping, Lasserre, Eric, Llauro, Christel, Debladis, Emilie, Akakpo, Roland, Hsing, Yue-Ie, Panaud, Olivier
Published in Nature communications (03.01.2019)
Published in Nature communications (03.01.2019)
Get full text
Journal Article
Sequencing the extrachromosomal circular mobilome reveals retrotransposon activity in plants
Lanciano, Sophie, Carpentier, Marie-Christine, Llauro, Christel, Jobet, Edouard, Robakowska-Hyzorek, Dagmara, Lasserre, Eric, Ghesquière, Alain, Panaud, Olivier, Mirouze, Marie
Published in PLoS genetics (17.02.2017)
Published in PLoS genetics (17.02.2017)
Get full text
Journal Article
The genome sequence of African rice (Oryza glaberrima) and evidence for independent domestication
Wang, Muhua, Yu, Yeisoo, Haberer, Georg, Marri, Pradeep Reddy, Fan, Chuanzhu, Goicoechea, Jose Luis, Zuccolo, Andrea, Song, Xiang, Kudrna, Dave, Ammiraju, Jetty S S, Cossu, Rosa Maria, Maldonado, Carlos, Chen, Jinfeng, Lee, Seunghee, Sisneros, Nick, de Baynast, Kristi, Golser, Wolfgang, Wissotski, Marina, Kim, Woojin, Sanchez, Paul, Ndjiondjop, Marie-Noelle, Sanni, Kayode, Long, Manyuan, Carney, Judith, Panaud, Olivier, Wicker, Thomas, Machado, Carlos A, Chen, Mingsheng, Mayer, Klaus F X, Rounsley, Steve, Wing, Rod A
Published in Nature genetics (01.09.2014)
Published in Nature genetics (01.09.2014)
Get full text
Journal Article
Widespread and frequent horizontal transfers of transposable elements in plants
El Baidouri, Moaine, Carpentier, Marie-Christine, Cooke, Richard, Gao, Dongying, Lasserre, Eric, Llauro, Christel, Mirouze, Marie, Picault, Nathalie, Jackson, Scott A, Panaud, Olivier
Published in Genome research (01.05.2014)
Published in Genome research (01.05.2014)
Get full text
Journal Article
Genome-wide analysis of horizontal transfer in non-model wild species from a natural ecosystem reveals new insights into genetic exchange in plants
Aubin, Emilie, Llauro, Christel, Garrigue, Joseph, Mirouze, Marie, Panaud, Olivier, El Baidouri, Moaine
Published in PLoS genetics (19.10.2023)
Published in PLoS genetics (19.10.2023)
Get full text
Journal Article
A unified classification system for eukaryotic transposable elements
Schulman, Alan H, Wicker, Thomas, Sabot, François, Hua-Van, Aurélie, Bennetzen, Jeffrey L, Capy, Pierre, Chalhoub, Boulos, Flavell, Andrew, Leroy, Philippe, Morgante, Michele, Panaud, Olivier, Paux, Etienne, SanMiguel, Phillip
Published in Nature reviews. Genetics (01.12.2007)
Published in Nature reviews. Genetics (01.12.2007)
Get full text
Journal Article
Horizontal Gene Transfers in Plants
Aubin, Emilie, El Baidouri, Moaine, Panaud, Olivier
Published in Life (Basel, Switzerland) (21.08.2021)
Published in Life (Basel, Switzerland) (21.08.2021)
Get full text
Journal Article
Doubling genome size without polyploidization: dynamics of retrotransposition-driven genomic expansions in Oryza australiensis, a wild relative of rice
Piegu, Benoit, Guyot, Romain, Picault, Nathalie, Roulin, Anne, Sanyal, Abhijit, Saniyal, Abhijit, Kim, Hyeran, Collura, Kristi, Brar, Darshan S, Jackson, Scott, Wing, Rod A, Panaud, Olivier
Published in Genome Research (01.10.2006)
Published in Genome Research (01.10.2006)
Get full text
Journal Article
The ecology of the genome and the dynamics of the biological dark matter
Flores-Ferrer, Alheli, Nguyen, Anne, Glémin, Sylvain, Deragon, Jean-Marc, Panaud, Olivier, Gourbière, Sébastien
Published in Journal of theoretical biology (07.06.2021)
Published in Journal of theoretical biology (07.06.2021)
Get full text
Journal Article
DNA transposon activity is associated with increased mutation rates in genes of rice and other grasses
Wicker, Thomas, Yu, Yeisoo, Haberer, Georg, Mayer, Klaus F. X., Marri, Pradeep Reddy, Rounsley, Steve, Chen, Mingsheng, Zuccolo, Andrea, Panaud, Olivier, Wing, Rod A., Roffler, Stefan
Published in Nature communications (07.09.2016)
Published in Nature communications (07.09.2016)
Get full text
Journal Article
Genome of the early spider-orchid Ophrys sphegodes provides insights into sexual deception and pollinator adaptation
Russo, Alessia, Alessandrini, Mattia, El Baidouri, Moaine, Frei, Daniel, Galise, Teresa Rosa, Gaidusch, Lara, Oertel, Hannah F., Garcia Morales, Sara E., Potente, Giacomo, Tian, Qin, Smetanin, Dmitry, Bertrand, Joris A. M., Onstein, Renske E., Panaud, Olivier, Frey, Jürg E., Cozzolino, Salvatore, Wicker, Thomas, Xu, Shuqing, Grossniklaus, Ueli, Schlüter, Philipp M.
Published in Nature communications (26.07.2024)
Published in Nature communications (26.07.2024)
Get full text
Journal Article
Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features
Derelle, E, Ferraz, C, Rombauts, S, Rouze, P, Worden, A.Z, Robbens, S, Partensky, F, Degroeve, S, Echeynie, S, Cooke, R
Published in Proceedings of the National Academy of Sciences - PNAS (01.08.2006)
Published in Proceedings of the National Academy of Sciences - PNAS (01.08.2006)
Get full text
Journal Article
Identification of high-copy number long terminal repeat retrotransposons and their expansion in Phalaenopsis orchids
Hsu, Chia-Chi, Chen, Shu-Yun, Lai, Pei-Han, Hsiao, Yu-Yun, Tsai, Wen-Chieh, Liu, Zhong-Jian, Chung, Mei-Chu, Panaud, Olivier, Chen, Hong-Hwa
Published in BMC genomics (19.11.2020)
Published in BMC genomics (19.11.2020)
Get full text
Journal Article
RiTE database: a resource database for genus-wide rice genomics and evolutionary biology
Copetti, Dario, Zhang, Jianwei, El Baidouri, Moaine, Gao, Dongying, Wang, Jun, Barghini, Elena, Cossu, Rosa M, Angelova, Angelina, Maldonado L, Carlos E, Roffler, Stefan, Ohyanagi, Hajime, Wicker, Thomas, Fan, Chuanzhu, Zuccolo, Andrea, Chen, Mingsheng, Costa de Oliveira, Antonio, Han, Bin, Henry, Robert, Hsing, Yue-Ie, Kurata, Nori, Wang, Wen, Jackson, Scott A, Panaud, Olivier, Wing, Rod A
Published in BMC genomics (22.07.2015)
Published in BMC genomics (22.07.2015)
Get full text
Journal Article
QTL Mapping Combined With Comparative Analyses Identified Candidate Genes for Reduced Shattering in Setaria italica
Odonkor, Sandra, Choi, Soyeon, Chakraborty, Debkanta, Martinez-Bello, Liliam, Wang, Xuewen, Bahri, Bochra A, Tenaillon, Maud I, Panaud, Olivier, Devos, Katrien M
Published in Frontiers in plant science (19.07.2018)
Published in Frontiers in plant science (19.07.2018)
Get full text
Journal Article