SQuIRE reveals locus-specific regulation of interspersed repeat expression
Yang, Wan R, Ardeljan, Daniel, Pacyna, Clarissa N, Payer, Lindsay M, Burns, Kathleen H
Published in Nucleic acids research (18.03.2019)
Published in Nucleic acids research (18.03.2019)
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Journal Article
Precise identification of cancer cells from allelic imbalances in single cell transcriptomes
Trinh, Mi K., Pacyna, Clarissa N., Kildisiute, Gerda, Thevanesan, Christine, Piapi, Alice, Ambridge, Kirsty, Anderson, Nathaniel D., Khabirova, Eleonora, Prigmore, Elena, Straathof, Karin, Behjati, Sam, Young, Matthew D.
Published in Communications biology (07.09.2022)
Published in Communications biology (07.09.2022)
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Journal Article
SQuIRE reveals locus-specific regulation of interspersed repeat expression
Yang, Wan R, Ardeljan, Daniel, Pacyna, Clarissa N, Payer, Lindsay M, Burns, Kathleen H
Published in Nucleic acids research (18.03.2019)
Published in Nucleic acids research (18.03.2019)
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Journal Article
Multifocal, multiphenotypic tumours arising from an MTOR mutation acquired in early embryogenesis
Pacyna, Clarissa N, Anandapadamanaban, Madhanagopal, Loudon, Kevin W, Hay, Iain M, Perisic, Olga, Li, Ruoyan, Byrne, Matthew, Allen, Laura, Roberts, Kirsty, Hooks, Yvette, Warren, Anne Y, Stewart, Grant D, Clatworthy, Menna R, Teichmann, Sarah A, Behjati, Sam, Campbell, Peter J, Williams, Roger L, Mitchell, Thomas J
Published in Oncogene (13.09.2024)
Published in Oncogene (13.09.2024)
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Journal Article
Tumor to normal single-cell mRNA comparisons reveal a pan-neuroblastoma cancer cell
Kildisiute, Gerda, Kholosy, Waleed M, Young, Matthew D, Roberts, Kenny, Elmentaite, Rasa, van Hooff, Sander R, Pacyna, Clarissa N, Khabirova, Eleonora, Piapi, Alice, Thevanesan, Christine, Bugallo-Blanco, Eva, Burke, Christina, Mamanova, Lira, Keller, Kaylee M, Langenberg-Ververgaert, Karin P S, Lijnzaad, Philip, Margaritis, Thanasis, Holstege, Frank C P, Tas, Michelle L, Wijnen, Marc H W A, van Noesel, Max M, Del Valle, Ignacio, Barone, Giuseppe, van der Linden, Reinier, Duncan, Catriona, Anderson, John, Achermann, John C, Haniffa, Muzlifah, Teichmann, Sarah A, Rampling, Dyanne, Sebire, Neil J, He, Xiaoling, de Krijger, Ronald R, Barker, Roger A, Meyer, Kerstin B, Bayraktar, Omer, Straathof, Karin, Molenaar, Jan J, Behjati, Sam
Published in Science advances (05.02.2021)
Published in Science advances (05.02.2021)
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Journal Article
Multifocal, multiphenotypic tumours arising from an MTOR mutation acquired in early embryogenesis
Pacyna, Clarissa N, Anandapadamanaban, Madhanagopal, Loudon, Kevin W, Hay, Iain M, Perisic, Olga, Li, Ruoyan, Byrne, Matthew, Allen, Laura, Roberts, Kirsty, Hooks, Yvette, Warren, Anne Y, Stewart, Grant D, Clatworthy, Menna R, Teichmann, Sarah, Behjati, Sam, Campbell, Peter J, Williams, Roge L, Mitchell, Thomas J
Published in bioRxiv (13.12.2023)
Published in bioRxiv (13.12.2023)
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Paper
SQuIRE: Software for Quantifying Interspersed Repeat Elements
Yang, Wan Rou, Ardeljan, Daniel, Pacyna, Clarissa N, Payer, Lindsay M, Burns, Kathleen H
Published in bioRxiv (04.05.2018)
Published in bioRxiv (04.05.2018)
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Paper