Repetitive elements may comprise over two-thirds of the human genome
de Koning, A P Jason, Gu, Wanjun, Castoe, Todd A, Batzer, Mark A, Pollock, David D
Published in PLoS genetics (01.12.2011)
Published in PLoS genetics (01.12.2011)
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Journal Article
Amino acid coevolution induces an evolutionary Stokes shift
Pollock, David D, Thiltgen, Grant, Goldstein, Richard A
Published in Proceedings of the National Academy of Sciences - PNAS (22.05.2012)
Published in Proceedings of the National Academy of Sciences - PNAS (22.05.2012)
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Journal Article
Gene-specific RNA polymerase II phosphorylation and the CTD code
Erickson, Benjamin, Pollock, David D, Seward, David, Megee, Paul C, Bentley, David L, Graber, Joel H, Luo, Weifei, Kim, Hyunmin
Published in Nature structural & molecular biology (01.10.2010)
Published in Nature structural & molecular biology (01.10.2010)
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Journal Article
Strong evidence for protein epistasis, weak evidence against it
Pollock, David D, Goldstein, Richard A
Published in Proceedings of the National Academy of Sciences - PNAS (15.04.2014)
Published in Proceedings of the National Academy of Sciences - PNAS (15.04.2014)
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Journal Article
Evidence for an ancient adaptive episode of convergent molecular evolution
Castoe, Todd A, de Koning, A.P. Jason, Kim, Hyun-Min, Gu, Wanjun, Noonan, Brice P, Naylor, Gavin, Jiang, Zhi J, Parkinson, Christopher L, Pollock, David D
Published in Proceedings of the National Academy of Sciences - PNAS (02.06.2009)
Published in Proceedings of the National Academy of Sciences - PNAS (02.06.2009)
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Journal Article
Rapid identification of thousands of copperhead snake (Agkistrodon contortrix) microsatellite loci from modest amounts of 454 shotgun genome sequence
CASTOE, TODD A, POOLE, ALEXANDER W, GU, WANJUN, JASONdeKONING, A.P, DAZA, JUAN M, SMITH, ERIC N, POLLOCK, DAVID D
Published in Molecular ecology resources (01.03.2010)
Published in Molecular ecology resources (01.03.2010)
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Journal Article
Adaptive evolution and functional redesign of core metabolic proteins in snakes
Castoe, Todd A, Jiang, Zhi J, Gu, Wanjun, Wang, Zhengyuan O, Pollock, David D
Published in PloS one (21.05.2008)
Published in PloS one (21.05.2008)
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Journal Article
Phylodynamics of a regional SARS-CoV-2 rapid spreading event in Colorado in late 2020
Wade, Kristen J, Tisa, Samantha, Barrington, Chloe, Henriksen, Jesslyn C, Crooks, Kristy R, Gignoux, Christopher R, Almand, Austin T, Steel, J. Jordan, Sitko, John C, Rohrer, Joseph W, Wickert, Douglas P, Almand, Erin A, Pollock, David D, Rissland, Olivia S
Published in PloS one (04.10.2022)
Published in PloS one (04.10.2022)
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Journal Article
Population genomic analyses of schistosome parasites highlight critical challenges facing endgame elimination efforts
Shortt, Jonathan A, Timm, Laura E, Hales, Nicole R, Nikolakis, Zachary L, Schield, Drew R, Perry, Blair W, Liu, Yang, Zhong, Bo, Castoe, Todd A, Carlton, Elizabeth J, Pollock, David D
Published in Scientific reports (25.03.2021)
Published in Scientific reports (25.03.2021)
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Journal Article
Finding and extending ancient simple sequence repeat-derived regions in the human genome
Shortt, Jonathan A, Ruggiero, Robert P, Cox, Corey, Wacholder, Aaron C, Pollock, David D
Published in Mobile DNA (17.02.2020)
Published in Mobile DNA (17.02.2020)
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Journal Article
Patterns of relatedness and genetic diversity inferred from whole genome sequencing of archival blood fluke miracidia (Schistosoma japonicum)
Nikolakis, Zachary L, Hales, Nicole R, Perry, Blair W, Schield, Drew R, Timm, Laura E, Liu, Yang, Zhong, Bo, Kechris, Katerina J, Carlton, Elizabeth J, Pollock, David D, Castoe, Todd A
Published in PLoS neglected tropical diseases (06.01.2021)
Published in PLoS neglected tropical diseases (06.01.2021)
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Journal Article
Integrating genomic and epidemiologic data to accelerate progress toward schistosomiasis elimination
Lund, Andrea J, Wade, Kristen J, Nikolakis, Zachary L, Ivey, Kathleen N, Perry, Blair W, Pike, Hamish N C, Paull, Sara H, Liu, Yang, Castoe, Todd A, Pollock, David D, Carlton, Elizabeth J
Published in eLife (30.08.2022)
Published in eLife (30.08.2022)
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Journal Article
LTR retrotransposons contribute to genomic gigantism in plethodontid salamanders
Sun, Cheng, Shepard, Donald B, Chong, Rebecca A, López Arriaza, José, Hall, Kathryn, Castoe, Todd A, Feschotte, Cédric, Pollock, David D, Mueller, Rachel Lockridge
Published in Genome biology and evolution (01.01.2012)
Published in Genome biology and evolution (01.01.2012)
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Journal Article
Comparison of Normalization Methods for Construction of Large, Multiplex Amplicon Pools for Next-Generation Sequencing
Harris, J. Kirk, Sahl, Jason W, Castoe, Todd A, Wagner, Brandie D, Pollock, David D, Spear, John R
Published in Applied and Environmental Microbiology (01.06.2010)
Published in Applied and Environmental Microbiology (01.06.2010)
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Journal Article
Increased Taxon Sampling Is Advantageous for Phylogenetic Inference
Pollock, David D., Zwickl, Derrick J., McGuire, Jimmy A., Hillis, David M., Crandall, Keith
Published in Systematic biology (01.08.2002)
Published in Systematic biology (01.08.2002)
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Journal Article
Assessing the accuracy of ancestral protein reconstruction methods
Williams, Paul D, Pollock, David D, Blackburne, Benjamin P, Goldstein, Richard A
Published in PLoS computational biology (01.06.2006)
Published in PLoS computational biology (01.06.2006)
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Journal Article
Whole Genome Amplification and Reduced-Representation Genome Sequencing of Schistosoma japonicum Miracidia
Shortt, Jonathan A, Card, Daren C, Schield, Drew R, Liu, Yang, Zhong, Bo, Castoe, Todd A, Carlton, Elizabeth J, Pollock, David D
Published in PLoS neglected tropical diseases (20.01.2017)
Published in PLoS neglected tropical diseases (20.01.2017)
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